JulioV
|
cff83a7ceb
|
Implement parse fitbit data
|
2020-10-22 13:08:52 -04:00 |
|
JulioV
|
c266f6dd10
|
Update participant files structure and fitbit download rule
|
2020-10-20 19:12:01 -04:00 |
Meng Li
|
8c0f6a000d
|
Fix chunk_episodes() bugs: set segment_start_timestamp as int
|
2020-10-19 19:36:26 -04:00 |
|
JulioV
|
24bf62a7ab
|
Update file names
|
2020-10-19 15:07:12 -04:00 |
|
Meng Li
|
ac9cf92732
|
Add accelerometer features of PANDA provider
|
2020-10-13 17:54:53 -04:00 |
|
Meng Li
|
29dcd1f284
|
Add accelerometer features of RAPIDS provider
|
2020-10-13 11:42:36 -04:00 |
nikunjgoel95
|
dcf1255b4b
|
Fix runtime bug in Radius of Gyration of Doryab Location.
|
2020-10-10 13:26:06 -04:00 |
|
JulioV
|
3996e0ab17
|
Fix bug when episodes are empty
|
2020-10-09 17:00:20 -04:00 |
|
JulioV
|
2c7beec1da
|
Fix NAs are now 0 in some calls and msgs features
|
2020-10-08 12:23:54 -04:00 |
|
Meng Li
|
236b1cd809
|
Update AR module for segments; Refactor input format
|
2020-10-07 18:11:06 -04:00 |
|
JulioV
|
6b1e006b82
|
Refactor fused location resampling
|
2020-10-07 11:51:31 -04:00 |
|
nikunjgoel95
|
80ff3f4229
|
Cleaning the Doryab location features code to fix the bug of Emoty dataframe in ClusterAndLabel
|
2020-10-01 11:34:41 -04:00 |
|
JulioV
|
c0c32d9f9e
|
Fix bug in assign date segment when file is empty
|
2020-09-30 14:53:59 -04:00 |
|
Meng Li
|
bccc9a0697
|
Move deduplicate_episodes() function into chunk_episodes() function; rename "time_diff" with duration
|
2020-09-29 18:05:25 -04:00 |
|
JulioV
|
39f6e3841c
|
Update AR episode computation
|
2020-09-29 17:26:43 -04:00 |
|
JulioV
|
10b0386c8f
|
Merge branch 'day_segments' of https://github.com/carissalow/rapids into day_segments
|
2020-09-29 17:24:41 -04:00 |
|
Meng Li
|
f1717e59e7
|
Update screen&battery episodes features with different segment format
|
2020-09-29 17:13:34 -04:00 |
|
JulioV
|
499b92e240
|
Fix missing R library
|
2020-09-29 15:35:44 -04:00 |
|
JulioV
|
0dafdd1340
|
Redo resample episodes in R, new battery episodes
|
2020-09-29 15:18:48 -04:00 |
|
JulioV
|
a6b99259f7
|
Fix bug when filtering by day segment and there are no rows belonging to that segment
|
2020-09-28 15:53:38 -04:00 |
|
nikunjgoel95
|
4f64f7eeef
|
Fix the bug on ClusterAndLabel when recieving empty data.
|
2020-09-28 15:02:03 -04:00 |
|
JulioV
|
9e15f46fc3
|
Update day segment format
|
2020-09-28 11:38:47 -04:00 |
|
JulioV
|
303d1472ed
|
Change how we compute AR episodes
|
2020-09-22 17:32:51 -04:00 |
|
JulioV
|
a851a460e4
|
Change the way we compute battery episodes
|
2020-09-22 16:53:51 -04:00 |
|
JulioV
|
47ab0a2ce5
|
Fix phone_sensed_bins when there is no data
|
2020-09-21 10:28:42 -04:00 |
|
Meng Li
|
f806cb44ac
|
Fix the bug of screen duration features for different segments
|
2020-09-18 20:25:29 -04:00 |
kaguillera
|
ca14eba8e1
|
Initial testing restructure for 30mins segments
|
2020-09-18 19:14:07 -04:00 |
|
JulioV
|
3022a60fe9
|
Fix day segment error with no rows
|
2020-09-18 17:19:11 -04:00 |
|
JulioV
|
3c27bb2d18
|
Refactor frequency segments and fix periodic labels
|
2020-09-18 16:29:48 -04:00 |
|
JulioV
|
06bb2b9c73
|
Fix accuracy bug in barnett location features
|
2020-09-18 11:26:10 -04:00 |
|
JulioV
|
4dc8d38c66
|
Optimise assign to day segment
|
2020-09-16 14:54:20 -04:00 |
|
JulioV
|
c577229f18
|
Optimise assign to day segment
|
2020-09-14 17:56:04 -04:00 |
|
JulioV
|
a665aedbe8
|
Optimise assign day segment
|
2020-09-14 16:19:42 -04:00 |
|
JulioV
|
132e52aeeb
|
Fix day segment
|
2020-09-14 15:14:41 -04:00 |
|
JulioV
|
3c45f6b152
|
Refactor assign to day segment
|
2020-09-14 14:21:36 -04:00 |
|
kaguillera
|
e7db230426
|
New Application_foreground testing & bugfixes
|
2020-09-11 17:55:09 -04:00 |
|
kaguillera
|
d4c56642c7
|
New testing and bug fix for conversation features
|
2020-09-10 14:01:32 -04:00 |
|
JulioV
|
a25849f7a4
|
Fix timeattop location name bug
|
2020-09-09 11:17:49 -04:00 |
|
JulioV
|
6436bf79db
|
Fix overall heatmap bug
|
2020-09-09 11:17:05 -04:00 |
|
Meng Li
|
b1baf6d9df
|
Update overall compliance heatmap: x-axis label; plot title
|
2020-09-08 16:21:46 -04:00 |
|
kaguillera
|
cf2a8f13a3
|
New testing and minor bug fix for light
|
2020-09-04 12:33:13 -04:00 |
|
JulioV
|
1ed85f1180
|
Delete unused files
|
2020-09-02 14:12:53 -04:00 |
|
JulioV
|
98ebf9bd13
|
Migrate conversation to new file structure
|
2020-09-01 17:07:07 -04:00 |
|
JulioV
|
8d87f6e497
|
Migrate app foreground to new file structure
|
2020-09-01 15:25:35 -04:00 |
|
JulioV
|
681a77f23c
|
Clean utils.py
|
2020-09-01 12:02:31 -04:00 |
|
JulioV
|
d674010e08
|
Rename param to provider
|
2020-09-01 12:01:45 -04:00 |
|
JulioV
|
e643881058
|
Migrate light to new file structure
|
2020-09-01 12:01:24 -04:00 |
|
JulioV
|
eda58d9d2c
|
Migrate wifi to new file structure
|
2020-08-31 18:51:06 -04:00 |
|
JulioV
|
77d9d8f025
|
Migrate bluetooth to new file structure
|
2020-08-31 17:08:26 -04:00 |
|
JulioV
|
132311da77
|
Migrate messages to new file structure
|
2020-08-31 13:34:15 -04:00 |
|
kaguillera
|
148301d468
|
Testing, test docs and bugfixes for conversation
|
2020-08-28 18:28:00 -04:00 |
|
JulioV
|
e269062439
|
Migrate calls to new provider file structure
|
2020-08-28 17:50:49 -04:00 |
|
JulioV
|
011b9736d5
|
Refactor the function to fetch provider features
|
2020-08-28 17:40:23 -04:00 |
|
JulioV
|
b0f1477d7e
|
Migrate location providers to new file structure and segments
|
2020-08-28 13:53:00 -04:00 |
|
JulioV
|
3052693573
|
Add missing entropy lib to call features
|
2020-08-26 13:04:02 -04:00 |
|
JulioV
|
c3a6b1f9a2
|
Fix to calls change segment label column name
|
2020-08-26 13:02:27 -04:00 |
|
JulioV
|
14d2d694ce
|
Migrate messages to new segments
|
2020-08-26 13:01:58 -04:00 |
|
JulioV
|
31ec5b0da4
|
Finalise new day segment structure with calls as example
|
2020-08-26 12:09:53 -04:00 |
|
nikunjgoel95
|
6a5470e338
|
Splitting Energy Feature in Conversation to Voice and Noise.
|
2020-08-23 13:20:19 -04:00 |
Yasaman Sefidgar
|
4b6ba12e62
|
raise exception for invalid frequency segmentation info; fixed inconsistency in frequency segmentation output columns
|
2020-08-20 14:51:22 -04:00 |
|
Yasaman Sefidgar
|
5f672b1f39
|
verification and creation of frequency segments
|
2020-08-20 14:51:22 -04:00 |
|
JulioV
|
c2d011fb6a
|
Add base functions to compute_day_segments.py
|
2020-08-20 14:51:22 -04:00 |
|
JulioV
|
026d056378
|
Simplify window workflow
|
2020-08-20 14:51:22 -04:00 |
|
JulioV
|
a0b5b5982b
|
Setup rules and files to support multiple
|
2020-08-20 14:45:09 -04:00 |
|
Meng Li
|
b116accb6d
|
Disable error message and add prints for restore_sql_file
|
2020-08-18 17:39:25 -04:00 |
|
Meng Li
|
75deaf7c26
|
Fix sql file name for restore_sql_file.py
|
2020-08-18 14:32:26 -04:00 |
|
Meng Li
|
0b2abc692c
|
Fix restore_sql_file bug: table already exists
|
2020-08-18 14:18:30 -04:00 |
|
Meng Li
|
b3fbc79195
|
Minor fix of metrics section
|
2020-08-17 17:27:58 -04:00 |
|
Meng Li
|
00385dc54d
|
Discard useless parameters and related code of example
|
2020-08-17 10:48:15 -04:00 |
|
Meng Li
|
123b78d438
|
Fix minor bugs of modeling.py: f1-macro and proba
|
2020-08-16 16:08:51 -04:00 |
|
kaguillera
|
f5ea5c3116
|
Conversation testing, testing_docs & minor bugfix
|
2020-08-13 18:36:38 -04:00 |
|
kaguillera
|
1ad8bb0365
|
Add testing, test docs and minor fixes for AR
|
2020-08-13 13:41:45 -04:00 |
|
nikunjgoel95
|
622d2997c3
|
Fixed the time first and last conversation features bug.
|
2020-08-13 12:45:08 -04:00 |
|
Meng Li
|
b3b16bdb73
|
Minor fix of heatmap_days_by_sensors.py
|
2020-08-12 16:29:33 -04:00 |
|
Meng Li
|
5c25002507
|
Return an empty html file of heatmap_days_by_sensor when there are no records for any sensors.
|
2020-08-12 16:26:11 -04:00 |
|
nikunjgoel95
|
a3cd341bf2
|
Fixed the zero conversation time issues.
|
2020-08-11 20:24:21 -04:00 |
|
JulioV
|
08ce250839
|
Unify conversation timestamp for ios
|
2020-08-11 16:18:06 -04:00 |
|
JulioV
|
b04088f11f
|
Fix valid sensed days with 0 valid bins
|
2020-08-07 11:07:37 -04:00 |
|
Meng Li
|
18d220d6c0
|
Fix data cleaning bug: days threshold
|
2020-08-06 17:26:37 -04:00 |
|
nikunjgoel95
|
2859a53202
|
Small necessary changes in Location Doryab Features.
|
2020-08-05 13:39:37 -04:00 |
|
nikunjgoel95
|
38b3f55ab8
|
Added 'sampling_frequency' in Documentation.
|
2020-08-05 13:14:31 -04:00 |
|
nikunjgoel95
|
df7a52cd6c
|
Added Sampling Frequency to Doryab Location Features.
|
2020-08-05 13:02:34 -04:00 |
|
nikunjgoel95
|
8cfe2dabb7
|
Improved code for radius of gyration in location features.
|
2020-08-05 12:06:39 -04:00 |
|
Meng Li
|
973e1669fa
|
Move baselines into a folder; rename column of "num_of_participants" with "num_of_rows" in modeling.py
|
2020-08-05 07:51:35 -04:00 |
|
nikunjgoel95
|
2f4c137bc1
|
fixed the bug "Radius of Gyration"
|
2020-08-03 18:28:02 -04:00 |
|
Meng Li
|
e13b89b125
|
Add restore_sql_file rule; notsummarised module; diff platforms for heatmap_days_by_sensors
|
2020-08-03 13:09:16 -04:00 |
|
kaguillera
|
dbc51de4e3
|
Updated WIFI testing, bugfix and docs
|
2020-07-29 14:14:47 -04:00 |
|
Meng Li
|
93157db210
|
Data cleaning section: replace "day_type" with "day_idx"
|
2020-07-27 18:27:36 -04:00 |
|
Meng Li
|
84d4ea9258
|
HEATMAP_DAYS_BY_SENSORS: shows all dates when EXPECTED_NUM_OF_DAYS = -1
|
2020-07-26 20:37:24 -04:00 |
|
JulioV
|
388f09a003
|
Add missing wifi table
|
2020-07-24 16:35:41 -04:00 |
|
Meng Li
|
b3aa4d82e1
|
Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously)
|
2020-07-24 12:58:48 -04:00 |
|
JulioV
|
5f771618ae
|
Add screen episode filter parameters
|
2020-07-23 14:38:59 -04:00 |
|
nikunjgoel95
|
faad8f5a8f
|
Added minutes of data in a day/epoch.
|
2020-07-23 14:23:32 -04:00 |
|
Meng Li
|
b0354393ae
|
Add "corr_method" param to heatmap_features_correlations.py
|
2020-07-22 20:00:14 -04:00 |
|
Meng Li
|
c135b6ef78
|
Add visualization for data exploration
|
2020-07-22 16:47:32 -04:00 |
|
Meng Li
|
124843f96e
|
Make phone_valid_sensed_days rule works for different min_valid_hours_per_day thresholds
|
2020-07-21 20:41:24 -04:00 |
|
nikunjgoel95
|
0ada1292ed
|
Added maximum_gap_allowed parameter
|
2020-07-21 18:56:43 -04:00 |
|
Meng Li
|
c86efb19d6
|
Fix location_doryab bug: same location all day
|
2020-07-21 15:47:48 -04:00 |
|
nikunjgoel95
|
1614d577b8
|
Fixed the Conversation Duration bug.
|
2020-07-20 16:52:21 -04:00 |
|
JulioV
|
be6df7ebdb
|
Fix missed outgoing calls unification in iOS
|
2020-07-20 15:16:42 -04:00 |
|
Meng Li
|
4f885ef7b7
|
Modify dropDatesSameLocationAllDay() function in Doryab's location section
|
2020-07-20 09:58:34 -04:00 |
|
Meng Li
|
6c1b93efa9
|
Update function name of location_base.py
|
2020-07-19 21:50:12 -04:00 |
|
Meng Li
|
923a5213ef
|
Fix warning of location_doryab
|
2020-07-17 20:18:48 -04:00 |
|
nikunjgoel95
|
024ae1a549
|
Added Doryab's location features to rapids.
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-07-16 14:26:43 -04:00 |
|
kaguillera
|
4f256115c5
|
Apps_foreground, bugfixes, testing & testcase docs
|
2020-07-16 13:14:28 -04:00 |
|
kaguillera
|
6d37402ee4
|
Added Light Bugfix, testing and testcase docs
|
2020-07-10 14:01:19 -04:00 |
|
JulioV
|
d2704296f3
|
Refactor valid sensed bins and days
|
2020-07-09 13:01:50 -04:00 |
|
kaguillera
|
9ca54f930d
|
WIFI Bug fix and testing
|
2020-07-07 17:15:32 -04:00 |
|
kaguillera
|
f24d2876fc
|
Fixed bluetooth bug and added feeature testing
|
2020-07-06 18:11:28 -04:00 |
|
JulioV
|
06edf53016
|
Add support for multi-platform participants
|
2020-06-30 17:34:18 -04:00 |
|
JulioV
|
9811b8a34c
|
Fix screen firstuseafter feature
|
2020-06-30 14:52:23 -04:00 |
|
Meng Li
|
234dfec1fa
|
Fix minor bug of conversation_base.py
|
2020-06-29 20:29:49 -04:00 |
|
Meng Li
|
47369c4b2d
|
Fix minor bug of applications_forground_base.py
|
2020-06-29 20:24:00 -04:00 |
|
Meng Li
|
29b04b0601
|
Fix step bouts features
|
2020-06-26 17:33:30 -04:00 |
|
kaguillera
|
533d0adab3
|
Updated sms sensor to messages
|
2020-06-26 12:20:47 -04:00 |
|
Meng Li
|
17f41588d8
|
Fix the bug of feature extraction code for some sensors: break when there is no data for an epoch
|
2020-06-26 11:25:25 -04:00 |
|
Meng Li
|
e66ed6a79b
|
Fix the accelerometer bug: without evening data
|
2020-06-25 18:43:24 -04:00 |
|
Meng Li
|
84b9bd4e12
|
Merge branch 'master' of https://github.com/carissalow/rapids
|
2020-06-25 16:23:04 -04:00 |
|
Meng Li
|
d48db18f95
|
Fix the bug of missing sleep features of some dates
|
2020-06-25 16:22:49 -04:00 |
|
nikunjgoel95
|
929db5515c
|
Adding countConversation and Fixing duplicate bugs in data.
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-06-24 17:02:47 -04:00 |
|
Meng Li
|
b795d1a022
|
Refactor wifi features
|
2020-06-24 15:46:27 -04:00 |
|
Meng Li
|
b2347ecf03
|
Refactor bluetooth features
|
2020-06-24 15:10:42 -04:00 |
|
JulioV
|
1bdb52dd65
|
Add functionality to exlcude step data based on sleep
|
2020-06-24 13:33:58 -04:00 |
|
Meng Li
|
fd3aedf634
|
Fix the bug of step features: concat two dataframes with different index datatype
|
2020-06-24 13:02:12 -04:00 |
|
kaguillera
|
211aec1234
|
Merge branch 'master' of https://github.com/carissalow/rapids
Refactoring tests
|
2020-06-23 18:29:32 -04:00 |
|
kaguillera
|
7bcf674793
|
Refactored testing after pipeline refactoring
|
2020-06-23 18:29:01 -04:00 |
|
Meng Li
|
a47eb6823b
|
Fix warning of conversation features; replace ' with "
|
2020-06-23 14:12:38 -04:00 |
|
JulioV
|
36017d5dca
|
Refactor Snakefile and docs. Rename SMS scripts
|
2020-06-23 11:33:34 -04:00 |
|
kaguillera
|
9da4fb165c
|
Update test suite (sms, calls and screen)
|
2020-06-22 20:47:56 -04:00 |
|
Meng Li
|
4d1ff10701
|
Rename heartrate zone features
|
2020-06-22 14:15:56 -04:00 |
|
Meng Li
|
99fe86ac2a
|
Rename accelerometer features names
|
2020-06-22 13:47:25 -04:00 |
|
Meng Li
|
a121c0fe7b
|
Split accelerometer features in config file; drop count; add more stats features
|
2020-06-22 12:01:17 -04:00 |
|
nikunjgoel95
|
78a9d82a74
|
Modified the UNIX time to minutes from Midnight in timeFirstConversation and timeLastConversation
|
2020-06-21 16:49:29 -04:00 |
|
Meng Li
|
fa9d047eb1
|
Fix warning of accelerometer features
|
2020-06-19 19:05:57 -04:00 |
|
Meng Li
|
f07ba22f98
|
Minor fix for applications_foreground sensor
|
2020-06-19 16:22:57 -04:00 |
|
nikunjgoel95
|
1409de2832
|
Added Converstion Features.
Updated config.yaml, Snakefile, Features.Snakefile and documentation.
|
2020-06-19 01:27:28 -04:00 |
|
Meng Li
|
08a78f6622
|
Fix screen's episodepersensedminutes bug
|
2020-06-17 09:09:39 -04:00 |
|
kaguillera
|
996e7307d7
|
Added brackets screen time_diff
|
2020-06-16 18:44:51 -04:00 |
|
kaguillera
|
f0b1d70828
|
Minor fix for screen delta
|
2020-06-16 18:36:34 -04:00 |
|
kaguillera
|
77110be43b
|
Changed screen and battery deltas to minutes
|
2020-06-16 15:30:34 -04:00 |
|
Meng Li
|
ee6ddf7677
|
Convert time difference to minutes for feature_utils.py script
|
2020-06-16 15:18:58 -04:00 |
|
Meng Li
|
343b8366c0
|
Remove useless packages
|
2020-06-16 14:49:33 -04:00 |
|
Meng Li
|
e133b8b530
|
Refactor fitbit sleep features
|
2020-06-12 18:44:05 -04:00 |
|
Meng Li
|
dcc7ca14e3
|
Refactor fitbit heartrate features
|
2020-06-12 16:04:03 -04:00 |
|
JulioV
|
3287866f4b
|
Update tidyr and fix resample pivot_longer bug
|
2020-06-12 14:51:38 -04:00 |
|
Meng Li
|
48591a4bd3
|
Add exception for screen feature extraction
|
2020-06-12 13:28:41 -04:00 |
|
JulioV
|
8fbafcbe0c
|
Fix location bug and improve fused resampling
|
2020-06-11 12:25:49 -04:00 |
|
Meng Li
|
0115fd14f6
|
Refactor fitbit step features
|
2020-06-05 21:29:39 -04:00 |
|
Meng Li
|
925e986c1e
|
Update fitbit_sleep_features.py: return empty file when epoch is not daily
|
2020-06-05 19:50:22 -04:00 |
|
Meng Li
|
9c1f2f6bbe
|
Update fitbit_parse_sleep.py
|
2020-06-05 17:28:43 -04:00 |
|
Meng Li
|
7a32acdd45
|
Fix count active/sedentary bout bug
|
2020-06-05 14:33:23 -04:00 |
|
Meng Li
|
aa1baaf948
|
Refactor activity recognition features
|
2020-06-04 19:32:28 -04:00 |
|
Meng Li
|
ff1bc33c34
|
Update fitbit_parse_heartrate.py
|
2020-06-04 18:07:15 -04:00 |
|
JulioV
|
b14ddcdea6
|
Update fitbit_parse_steps.py
|
2020-06-04 18:03:40 -04:00 |
|
Meng Li
|
2d0ef98f26
|
Refactor screen features
|
2020-06-03 18:55:36 -04:00 |
|
Meng Li
|
6562754777
|
Refactor battery features
|
2020-06-03 17:36:52 -04:00 |
|
Meng Li
|
a8eb5a83f8
|
Fix overlap in tick label issue
|
2020-06-03 17:18:57 -04:00 |
|
nikunjgoel95
|
4c835cde37
|
Fixed the Duration for the Classic Sleep type in Version 1.2 of FItbit.
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-06-03 16:40:42 -04:00 |
|
JulioV
|
bf6f1f0bda
|
Fix call bug
|
2020-06-03 16:29:01 -04:00 |
|
JulioV
|
d0bff906e4
|
Fix call bug
|
2020-06-03 12:44:23 -04:00 |
|
JulioV
|
3c1bdb8aa7
|
Fix calls bug
|
2020-06-02 19:13:01 -04:00 |
|
JulioV
|
91c24a652a
|
Refactor call features and fix bug with countmostfrequentcontact
|
2020-06-02 17:49:55 -04:00 |
|
Meng Li
|
9048c06fc4
|
Refactor application foreground features
|
2020-05-29 17:04:24 -04:00 |
|
JulioV
|
cf272793a2
|
Fix countmostfrequentcontact bug
|
2020-05-29 14:29:35 -04:00 |
|
JulioV
|
c1e25ac1ad
|
Change SMS first and last metrics from hours to minutes
|
2020-05-29 13:28:39 -04:00 |
|
JulioV
|
f344c14e92
|
Fix bug in SMS features
|
2020-05-29 11:41:17 -04:00 |
|
Meng Li
|
9c889938fb
|
Refactor accelerometer features
|
2020-05-28 17:17:25 -04:00 |
|
nikunjgoel95
|
e952e27350
|
Adding the code to parse the FITBIT sleep data for API version 1.2
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-05-27 14:29:28 -04:00 |
|
Meng Li
|
34ffe4abaf
|
Add the rule to merge population model results
|
2020-05-15 18:49:14 -04:00 |
|
Meng Li
|
8df8a5c2b3
|
Add baseline
|
2020-05-15 18:45:45 -04:00 |
|
Meng Li
|
8c8378f74a
|
Split modeling module into two rules; Add RandomOverSampler for resampling; Add log; Fix bug of AUC
|
2020-05-15 18:42:03 -04:00 |
|
Meng Li
|
5fab99d8df
|
Add one rule to calculate the ratio of cells with missing values for cleaned features
|
2020-05-15 18:25:07 -04:00 |
|
Meng Li
|
78cd8159be
|
Fix bug of clean_features_for_model
|
2020-05-15 17:53:43 -04:00 |
|
Meng Li
|
915bdd04b1
|
Parse Fitbit summary and intraday data; Extract Fitbit daily features from summary data
|
2020-05-15 17:51:00 -04:00 |
|
JulioV
|
f0674122ff
|
Replace packrat with renv
|
2020-05-01 19:46:04 -04:00 |
|
Meng Li
|
6ed52e7d1a
|
Change the method of computing missing value cells
|
2020-04-30 15:40:55 -04:00 |
|
Meng Li
|
2720b24c0a
|
Make screen_features.py script compatible with both Pandas 0.25.2 and 1.0.3.
|
2020-04-30 10:49:49 -04:00 |
|
Meng Li
|
7cbb227214
|
Add modeling module
|
2020-04-29 18:53:54 -04:00 |
|
Meng Li
|
f292ba3bff
|
Merge branch 'master' of https://github.com/carissalow/rapids
|
2020-04-29 15:05:18 -04:00 |
|
Meng Li
|
9ddb50ed59
|
Split days threshold of data cleaning into days_before_surgery and days_after_discharge
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-29 14:37:40 -04:00 |
|
JulioV
|
5a2049f533
|
Replace NAs with 0 for bluetooth countscansmostuniquedevice
|
2020-04-27 21:55:23 +00:00 |
|
Meng Li
|
3314040912
|
Consider "walking" for AR mobile episodes
|
2020-04-20 18:09:05 -04:00 |
|
Meng Li
|
490599c742
|
Implement AR features for iOS
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-20 18:05:54 -04:00 |
|
Meng Li
|
5696b4f6d4
|
Add merge module for demographic features and target
|
2020-04-16 14:20:16 -04:00 |
|
Meng Li
|
eac721de84
|
Add demographic_features and targets module; refactor analysis code
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-16 12:38:28 -04:00 |
|
Meng Li
|
695984586f
|
Add calories module for fitbit_readable_datetime.py
|
2020-04-15 16:01:02 -04:00 |
Mingze Cao
|
8671f8db68
|
Modified condition to extract feature "heartrate_zones"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-15 09:26:16 -05:00 |
|
JulioV
|
cdd10578b3
|
Ignore NA values for dropping zero variance columns
|
2020-04-13 16:59:33 -04:00 |
|
JulioV
|
010114c1aa
|
Add wifi features
|
2020-04-13 13:24:52 -04:00 |
|
Mingze Cao
|
8cc93c8791
|
Refactor battery feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 15:06:25 -05:00 |
|
Mingze Cao
|
2d7d3bfccf
|
Refactor location_barnett features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 12:20:39 -05:00 |
|
JulioV
|
fa67359b5f
|
Fix return in iOS battery deltas
|
2020-04-09 12:13:00 -04:00 |
|
JulioV
|
e2b2643ba9
|
Fix bug that unified battery status for iOS client v2
|
2020-04-09 12:10:03 -04:00 |
|
JulioV
|
5d68b5052c
|
Fix bug where no deltas where created for Android
|
2020-04-09 12:07:35 -04:00 |
|
Mingze Cao
|
c2fbc3ad7a
|
Refactor sms feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 15:02:58 -05:00 |
|
Mingze Cao
|
97c83caebc
|
Refactor fitbit_heartrate feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 14:31:43 -05:00 |
|
Mingze Cao
|
a53ba242f8
|
Refactor google_activity_recognition feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:36:36 -05:00 |
|
Mingze Cao
|
0809001dfa
|
Refactor light features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:02:53 -05:00 |
|
Mingze Cao
|
f46e8c0666
|
Refactor applications_foreground features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 12:31:43 -05:00 |
|
Mingze Cao
|
d1c38016de
|
Refactor call features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:51:18 -05:00 |
|
Mingze Cao
|
e0d19cbc1b
|
Refactor screen features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:05:16 -05:00 |
|
Meng Li
|
8d4a0718e8
|
Fix bug of Barnett's location features
|
2020-04-07 11:22:04 -04:00 |
|
Mingze Cao
|
3986f4e185
|
Refactor fitbit_step features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-03 16:03:45 -05:00 |
|
Mingze Cao
|
595bdd6f5b
|
Refactor bluetooth features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-03 12:07:09 -05:00 |
|
Mingze Cao
|
106f552442
|
replace "metrics" with "features" of the accelerometer
|
2020-04-02 16:40:40 -05:00 |
|
Mingze Cao
|
6045df494d
|
Modify the Accelerometer ‘Metrics’ to Accelerometer ‘Features’
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-02 16:36:28 -05:00 |
|
JulioV
|
9d27431e3b
|
Speed up raw csv reads and writes in R
|
2020-04-02 16:28:19 -04:00 |
|
Mingze Cao
|
7d770c91f3
|
Add sumdurationsedentarybout of the fitbit_step sensor
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-02 13:36:54 -05:00 |
|
Meng Li
|
1ce76a5380
|
Refactor light features
|
2020-04-01 18:29:53 -04:00 |
|
Meng Li
|
ac9fb487a6
|
Fix bug of select_days_to_analyse.py
|
2020-03-31 14:51:08 -04:00 |
|
JulioV
|
09753905f2
|
Refactor SMS features
|
2020-03-31 13:33:03 -04:00 |
|
Meng Li
|
ea46df63d5
|
Get targets
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-03-26 17:27:23 -04:00 |
|
Meng Li
|
ac758e3776
|
Reduce the plot size by excluding plotlyjs
|
2020-03-23 18:24:19 -04:00 |
|
JulioV
|
0e173872df
|
Refactor select_days_to_analyse, fix merge bugs, add clean metrics for model
|
2020-03-17 21:15:53 -04:00 |
|
Meng Li
|
7c240a9613
|
Select days to analyse
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-03-17 17:26:30 -04:00 |
|
JulioV
|
3d4c26754e
|
Rename merge metrics for models and add filter valid sensed days
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-03-12 17:31:46 -04:00 |
|
JulioV
|
c4d9702a5c
|
Add location_barnett prefix to location features
|
2020-03-12 13:18:36 -04:00 |
|
Meng Li
|
c6ff0346f4
|
Fix bug of screen_metrics.py when df is empty
|
2020-03-12 11:26:42 -04:00 |
|
JulioV
|
23085aac2a
|
Replace NA with 0 in most frequent contact SMS metric
|
2020-03-12 11:22:31 -04:00 |
|
JulioV
|
ed5d938316
|
Replace NA with 0 in most frequent contact call metric
|
2020-03-12 11:18:32 -04:00 |
|
Meng Li
|
9069cffa0e
|
Fix encoding error for apps features
|
2020-03-11 16:48:37 -04:00 |
|
Meng Li
|
b23bb0e402
|
Add INCLUDE_ZERO_STEP_ROWS flag for step sensor
|
2020-03-09 15:59:51 -04:00 |
|
Meng Li
|
1c413838ad
|
Replace NA with 0 for count features of apps sensor
|
2020-03-09 14:04:51 -04:00 |
|
Meng Li
|
e106bb3190
|
Do not fill NA with 0 for light metrics
|
2020-03-09 13:57:09 -04:00 |
|
Meng Li
|
490ff43fbf
|
Replace [] with 0 for mostcommonactivity of GAR sensor
|
2020-03-09 13:54:28 -04:00 |
|
Meng Li
|
aba9f13332
|
Add merge metrics module for analysis rules
|
2020-03-09 13:32:14 -04:00 |
|
Meng Li
|
2ea599e262
|
Replace NA with 0 for heart rate zone features
|
2020-03-05 16:49:06 -05:00 |
|
JulioV
|
dba2664ae5
|
Fix bug where location_barnett_metrics wouldn't include local_date
|
2020-03-05 14:48:48 -05:00 |
|
Meng Li
|
c2a74b1cba
|
Fix fitbit_readable_datetime.py to handle empty table
|
2020-03-05 14:39:05 -05:00 |
|
JulioV
|
f25dd026fd
|
Fix download_dataset.R to handle non sensor tables
|
2020-03-05 14:10:36 -05:00 |
|
JulioV
|
2548539dc4
|
Fix bug when application foreground list was empty
|
2020-03-05 13:23:21 -05:00 |
|
Meng Li
|
c8b7275084
|
Add firstuseafterTIME feature for screen sensor
|
2020-03-04 12:21:36 -05:00 |
|
Meng Li
|
85f4ec2ab6
|
Delete screen event features and add countepisode and episodepersensedminutes
|
2020-03-03 17:31:15 -05:00 |
|
JulioV
|
2c856f1cfc
|
Fix condition to require at least 2 rows to compute screen metrics
|
2020-03-03 12:20:36 -05:00 |
|
JulioV
|
f4367806f3
|
Fix screen deltas to keep only consecutive UNLOCK/OFF pairs
|
2020-03-03 12:09:18 -05:00 |
|
JulioV
|
e058820309
|
Fix encoding issues when reading participant files
|
2020-03-03 11:08:57 -05:00 |
|
JulioV
|
619a6e6e2b
|
Fix screen delta extraction for iOS and Android
|
2020-03-02 19:26:20 -05:00 |
|
Meng Li
|
fa9029b090
|
Add overall compliance heatmap for last 7 days
|
2020-02-25 13:27:17 -05:00 |
|
JulioV
|
f22d1834ee
|
Add metric filter to barnett location features
|
2020-02-21 10:58:35 -05:00 |
|
Meng Li
|
579df6325f
|
Add date filter for download_dataset
|
2020-02-20 15:51:22 -05:00 |
|
Meng Li
|
3369a97d0e
|
Add device_id and label to heatmaps
|
2020-02-20 10:16:03 -05:00 |
|
Meng Li
|
76888b412d
|
Add label and dates for external files
|
2020-02-18 16:41:10 -05:00 |
|
JulioV
|
6bbc916702
|
Add download_participants functionality
|
2020-02-10 16:45:34 -05:00 |
|
Meng
|
d6f2e2d7a3
|
Fixed mode issue of heartrate features
|
2020-02-07 13:22:47 -05:00 |
|
Meng Li
|
0840235280
|
Add applications_foreground features
|
2020-02-07 11:52:55 -05:00 |
|
Meng Li
|
770764ec8a
|
Add heartrate features
|
2020-02-07 11:35:15 -05:00 |
|
Meng Li
|
6c5ace5611
|
Fixed fitbit preprocess issue#28 and added heartrate_zone column for heartrate
|
2020-02-07 11:26:35 -05:00 |
|
Meng Li
|
2798a957be
|
Fixed heatmap issue#25
|
2020-02-07 11:19:56 -05:00 |
|
Meng Li
|
3d13940bd3
|
Fixed heatmap issue#27
|
2020-02-07 11:14:19 -05:00 |
Echhit Joshi
|
d82fa0d217
|
Add Fitbit steps feature extraction
|
2020-01-29 16:22:53 -05:00 |
|
Echhit Joshi
|
db2f3dc50f
|
Fixed 2 Issues: Feature Names, Implementation of metrics in Config File
|
2020-01-17 11:39:30 -05:00 |
|
JulioV
|
4aec2c4032
|
Combine all fitbit sensors in one script and one rule
|
2020-01-16 17:20:04 -05:00 |
|
JulioV
|
9d00f14f7f
|
Add category (genre) to foreground apps
|
2020-01-15 18:28:56 -05:00 |
|
Meng Li
|
34c4586e4d
|
Add fitbit raw data and datetime
|
2020-01-15 17:18:10 -05:00 |
|
Meng Li
|
ad514b5d40
|
Add accelerometer features
|
2020-01-15 14:15:24 -05:00 |
|
Meng Li
|
2b4e29ce6e
|
Add light features
|
2020-01-14 09:51:39 -05:00 |
|
JulioV
|
3fbc1b5b92
|
Add html compliance report
|
2019-12-18 15:23:42 -05:00 |
|
Meng Li
|
96394a0468
|
Replace ZERO with NaN for heatmap
|
2019-12-17 17:07:35 -05:00 |
|
JulioV
|
545d8a5ffe
|
Add support for multi device participants
|
2019-12-17 13:41:27 -05:00 |
|
Meng Li
|
3aa037f031
|
Fixed encoding
|
2019-12-16 11:13:32 -05:00 |
|
JulioV
|
e777bf171f
|
Make extension upper case for resample fused location
|
2019-12-12 14:40:19 -05:00 |
|
JulioV
|
3947f1ec29
|
Refactor resample fused location to filter fused rows earlier
|
2019-12-09 19:15:57 -05:00 |
|
JulioV
|
cb2ee1ec82
|
Add switch to barnet_locations.R to use all, all except fused or resample fused locations
|
2019-12-09 19:15:10 -05:00 |
|
JulioV
|
0ba88203f4
|
Add resampling for fused location
|
2019-12-09 18:23:00 -05:00 |
|
JulioV
|
6a79fbe1e8
|
Fix bug in iOS battery (different status compared to Android)
|
2019-12-05 16:24:05 -05:00 |
|
Meng Li
|
a4e39ad451
|
Add bin_size parameter for compliance_heatmap and screen_metrics
|
2019-12-05 11:07:40 -05:00 |
|
Meng Li
|
e6b096c6ad
|
Fixed empty event features of screen sensor
|
2019-12-04 16:37:38 -05:00 |
|
Meng Li
|
4390979143
|
Add unlocksperminute feature and remove countdiff for screen sensor
|
2019-12-04 16:04:37 -05:00 |
|
Meng Li
|
975dc80c4b
|
Change the input of compliance_heatmap.py
|
2019-12-04 15:32:20 -05:00 |
|
JulioV
|
4d52e2d980
|
Fix bugs with empty dataframes in screen and gar metrics
|
2019-12-04 12:04:20 -05:00 |
|
JulioV
|
0bd946b53c
|
Delete row names from sensed bins and valid sensed days
|
2019-12-04 11:39:40 -05:00 |
|
JulioV
|
15a9e33728
|
Add phone sensed bins (sensor row count for every n min bin)
|
2019-12-04 11:33:25 -05:00 |
|
Meng Li
|
dbe2e236a9
|
Fixed issue #16
|
2019-12-03 10:46:03 -05:00 |
|
Meng Li
|
c7ca35d13e
|
Fixed issue #17 and #18
|
2019-12-02 11:22:50 -05:00 |
|
Echhit Joshi
|
80376f0c35
|
Add Episodes GAR Metrics
|
2019-11-27 18:06:31 -05:00 |
|
JulioV
|
e5390ee0e2
|
Fix column name for gar deltas
|
2019-11-27 16:06:30 -05:00 |
|
JulioV
|
e6d418cd14
|
Add google activity recognition deltas
|
2019-11-27 15:53:37 -05:00 |
|
JulioV
|
037420457d
|
Fix index name for screen metrics
|
2019-11-27 15:36:37 -05:00 |
|
JulioV
|
9750353f5b
|
Add screen deltas
|
2019-11-27 15:27:48 -05:00 |
|
Meng Li
|
71e4ab3e5c
|
Extract screen features
|
2019-11-27 14:25:17 -05:00 |
|
Meng Li
|
5a32050295
|
Add fixed_cols for epoch segment function
|
2019-11-27 12:08:53 -05:00 |
|
Meng Li
|
9eaa48c7dd
|
create features_utils.py with epoch split function
|
2019-11-26 11:14:03 -05:00 |
|
Meng Li
|
2230421167
|
fix battery consumption rates bar chart
|
2019-11-25 15:44:10 -05:00 |
|
Meng Li
|
99d387a7a4
|
Add day epochs to battery metrics and fix some of them
|
2019-11-25 12:53:32 -05:00 |
|
JulioV
|
d8421575ba
|
Add start and end day segment to battery deltas
|
2019-11-21 12:39:52 -05:00 |
|
JulioV
|
34532a719b
|
Merge branch 'master' of https://github.com/JulioV/moshi-aware
|
2019-11-21 11:34:39 -05:00 |
|
JulioV
|
30f814887d
|
Add local_day_segment to battery deltas
|
2019-11-21 11:34:30 -05:00 |
|
Echhit Joshi
|
c5a0c1e0d6
|
Updated G_A_R features with epochs
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2019-11-18 14:22:08 -05:00 |
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JulioV
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f7be15ea9e
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Update compliance_heatmap to handle empty dataframes from all sensors
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2019-11-13 14:55:22 -05:00 |
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JulioV
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d24c62392a
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Fix small bug on battery_consumption plot script
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2019-11-13 14:54:44 -05:00 |
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JulioV
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44bbe17435
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Update location_barnett_metrics.R to handle empty dataframes and location sequences without flights
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2019-11-13 14:54:24 -05:00 |
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JulioV
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d2e9b79af6
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Update battery_deltas.R to handle empty dataframes
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2019-11-13 14:53:28 -05:00 |
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JulioV
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209a9232a3
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Fix return error in call metrics script
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2019-11-12 15:54:12 -05:00 |
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JulioV
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6cf39ad9c4
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Add three more features to sms
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2019-11-12 15:53:59 -05:00 |
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JulioV
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031ceb00e3
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Add three more features to calls
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2019-11-12 15:40:48 -05:00 |
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JulioV
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bea791a106
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Add unify ios and android rule and script
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2019-11-12 14:57:27 -05:00 |
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JulioV
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384f401062
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Avoid recording row names in download dataset and readable datetime
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2019-11-12 14:56:31 -05:00 |
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Echhit Joshi
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336ce12270
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Added "activity_change_count" feature
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2019-11-12 14:48:19 -05:00 |
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JulioV
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1d242abbe1
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Add min, max, std, and mode to calls metrics
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2019-11-11 15:15:20 -05:00 |
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Meng Li
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b16702561c
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Rename plot title
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2019-11-11 15:03:56 -05:00 |