Commit Graph

  • 63f5a526fc Bring back requested fields in config.yaml. master runner junos 2023-04-19 11:07:58 +0200
  • 1cc7339fc8 Completely remove PACKAGE_NAMES_HASHED and instead provide a differently structured file. junos 2023-04-18 22:58:42 +0200
  • 5307c71df0 Missing comma. junos 2023-04-18 22:45:12 +0200
  • f261286542 Add package_names_hashed param for rule phone_application_categories. junos 2023-04-18 22:40:11 +0200
  • a6bc0a90d1 Do not ignore application categories. junos 2023-04-18 21:34:59 +0200
  • f161da41f4 Merge branch 'master' into runner junos 2023-04-18 21:23:26 +0200
  • 8ffd934fd3 Categorize applications in config.yaml. junos 2023-04-18 20:39:57 +0200
  • cf6af7c9a4 Add a TODO. junos 2023-04-18 16:11:30 +0200
  • 4dacb7129d Change targets for 30 before. junos 2023-04-18 10:47:54 +0200
  • f542a97eab Change targets for 90 before. junos 2023-04-15 16:29:06 +0200
  • 5cb2dcfb00 Run 90 before event. junos 2023-04-15 16:18:55 +0200
  • 8cef60ba87 Limit memory usage by readable_datetime. update_libs junos 2023-04-14 15:59:44 +0200
  • 0d634f3622 Remove deprecated numpy dtype. junos 2023-04-14 13:43:20 +0200
  • 00e4f8deae More numeric_only arguments. junos 2023-04-13 13:04:53 +0200
  • 03687a1ac2 Fix deprecated attribute. junos 2023-04-12 18:21:43 +0200
  • a36da99ccb Catch another possible exception. junos 2023-04-12 16:37:25 +0200
  • 1d903f3629 Specify numeric_only for pandas.core.groupby.DataFrameGroupBy.mean. junos 2023-04-12 16:05:58 +0200
  • d678be0641 Extract definition of function. junos 2023-04-12 15:58:43 +0200
  • 27b90421bf Add a missing pip dependency. junos 2023-04-11 19:06:29 +0200
  • cb006ed0cf Completely overhaul environment.yml. junos 2023-04-11 19:04:28 +0200
  • 9ca58ed204 Fix Python libraries. junos 2023-04-11 17:21:03 +0200
  • 982fa982f7 Remove Python libraries versions. junos 2023-04-11 17:16:42 +0200
  • f8088172e9 Update more R packages. junos 2023-04-11 15:31:44 +0200
  • 801fbe1c10 Update R packages. junos 2023-03-30 20:33:35 +0200
  • fb8868b77d removed cleaning to make it run sociality-task Marcel Martinšek 2023-03-31 13:27:01 +0000
  • da77f7476c Merge branch 'sociality-task' of https://repo.ijs.si/junoslukan/rapids into sociality-task Marcel Martinšek 2023-03-31 13:08:19 +0000
  • 4db8810d08 corrected esm_features index column Marcel Martinšek 2023-03-31 13:08:15 +0000
  • 7832d7d098 Update R packages. junos 2023-03-30 20:33:35 +0200
  • e7bb9d6702 not working temp Marcel Martinšek 2023-03-30 11:54:51 +0000
  • 689f677a3e updated r package dependencies to make it run Marcel Martinšek 2023-03-29 13:09:26 +0000
  • bb1e1900a4 Add a note to think about. notes junos 2023-03-27 11:56:09 +0200
  • c35c75682f Add todo to rename a column. junos 2023-03-27 11:46:04 +0200
  • 8721b944ca Revert "Set config to testing mode." Primoz 2023-02-16 09:56:23 +0000
  • 36651a11c8 Drop all window count related features in cleaning script. Primoz 2023-02-15 14:15:56 +0000
  • 8ae5ad0e88 Add missing rapids_columns for speech sensor. Primoz 2023-02-15 13:42:44 +0000
  • e825aa7c89 Set config to testing mode. Primoz 2023-02-15 13:36:00 +0000
  • 5958948af2 Merge branch 'speech_sensor' Primoz 2023-02-15 13:30:43 +0000
  • 7e37eb9067 Change SPEECH sensor place in config Primoz 2023-01-23 15:32:52 +0000
  • 4d0497a5e0 Set appropriate calculations for speech senzor. Primoz 2023-01-17 14:00:42 +0000
  • 75b054d358 Integrate phone_speech into rapids pipeline. Primoz 2023-01-17 14:00:14 +0000
  • e27ec0269f Revert "Add Speech sensor - preparation." Primoz 2023-01-17 12:06:53 +0000
  • 9b45188a61 Revert "PHONE SPEECH - continuation ..." Primoz 2023-01-17 12:06:44 +0000
  • 3e6b34babc PHONE SPEECH - continuation ... Primoz 2023-01-11 13:05:42 +0000
  • 74fd4dfbd7 Add Speech sensor - preparation. Primoz 2023-01-11 12:48:38 +0000
  • 7b8538ce51 Fix a bug and remove sys.exit line from cleaning script. Primoz 2022-12-21 10:40:07 +0000
  • 41a17d35f1 Update ERS stress_event logic. Primoz 2022-12-19 15:40:40 +0000
  • 7f5a4e6744 Make stress events to be equal in duration. Primoz 2022-12-14 14:52:20 +0000
  • 3ce7f2c2a5 Seperate target standardization from rest of the features. Primoz 2022-12-13 15:31:39 +0000
  • e40f0fd8dc Bug fixed (mixed dtype warning). Primoz 2022-12-12 11:29:59 +0000
  • 8af3bdf768 Reset PIDS Primoz 2022-12-09 16:07:13 +0000
  • 01931b8873 Update README Primoz 2022-12-09 16:04:11 +0000
  • 569854ddf5 Merge branch 'master' of https://repo.ijs.si/junoslukan/rapids Primoz 2022-12-09 16:01:52 +0000
  • 3b2001f570 Modify the stress_event logic so that it includes where stressfulness is 0. Primoz 2022-12-09 16:01:46 +0000
  • 44a87c53eb Clarify runtime vs installation export of TZ. junos 2022-12-09 15:34:06 +0100
  • 8da7bd71b2 Merge branch 'master' of https://repo.ijs.si/junoslukan/rapids junos 2022-12-09 15:26:23 +0100
  • 788a81d96f Update readme with info from supermodule. junos 2022-12-09 15:26:12 +0100
  • 87e5209a9f Squashed commit of the following: Primoz 2022-12-08 16:04:39 +0000
  • 8a6b52a97c Switch to 30_before ERS with corresponding targets. imputation_and_cleaning Primoz 2022-11-29 11:35:49 +0000
  • 244a053730 Change output files settings to nonstandardized. Primoz 2022-11-29 11:19:43 +0000
  • be0324fd01 Fix some bugs and set categorical columns as categories dtypes. Primoz 2022-11-28 12:44:25 +0000
  • 99c2fab8f9 Fix a bug in the making of the individual model (when there is no target in the participants columns). Primoz 2022-11-16 09:50:18 +0000
  • 286de93bfd Fix some bugs and extend ERS and cleaning scripts with multiple stress event targets logic. Primoz 2022-11-15 11:21:51 +0000
  • ab803ee49c Add additional appraisal targets. Primoz 2022-11-15 10:14:07 +0000
  • 621f11b2d9 Fix a bug related to wrong user input (duplicated events). Primoz 2022-11-15 09:53:31 +0000
  • bd41f42a5d Rename target_ to segmenting_ method. Primoz 2022-11-14 15:07:36 +0000
  • a543ce372f Add comments for event_related_script understanding. Primoz 2022-11-14 15:04:16 +0000
  • 74b454b07b Apply changes to string answers to make them language-generic. Primoz 2022-11-11 09:15:12 +0000
  • 6ebe83e47e Improve the ERS extract method with a couple of validations. Primoz 2022-11-10 12:42:52 +0000
  • 00350ef8ca Change config for stressfulness event target method. Primoz 2022-11-10 10:32:58 +0000
  • e4985c9121 Override stressfulness event target with extracted values from csv. Primoz 2022-11-10 10:29:11 +0000
  • a668b6e8da Extract ERS and stress event targets to csv files (completed). Primoz 2022-11-10 09:37:27 +0000
  • 9199b53ded Get, join and start processing required ERS stress event data. Primoz 2022-11-09 15:11:51 +0000
  • f3c6a66da9 Begin with stress events in the ERS script. Primoz 2022-11-08 15:53:43 +0000
  • 0b3e9226b3 Make small corrections in ERS file. Primoz 2022-11-08 14:44:24 +0000
  • 2d83f7ddec Begin the ERS logic for 90-minutes events. Primoz 2022-11-08 11:32:05 +0000
  • 1da72a7cbe Rename targets method in config. Primoz 2022-11-08 09:45:37 +0000
  • 9f441afc16 Begin ERS logic for 90-minutes events. Primoz 2022-11-04 15:09:04 +0000
  • c1c9f4d05a Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-11-04 09:11:58 +0000
  • 62f46ea376 Prepare method-based logic for ERS generating. Primoz 2022-11-04 09:11:53 +0000
  • 7ab0280d7e Correctly rename stressful event target variable. Primoz 2022-11-04 08:58:08 +0000
  • eefa9f3f4d Add new target: stressfulness_event. Primoz 2022-11-03 14:49:54 +0000
  • 5e8174dd41 Add new target: stressfulness_period. Primoz 2022-11-03 13:52:45 +0000
  • 35c1a762e7 Improve filtering by esm_session and device_id. Primoz 2022-11-03 13:51:18 +0000
  • 02264b21fd Add logic for target selection in ERS processing. Primoz 2022-11-03 09:30:12 +0000
  • 0ce8723bdb Extend imputation logic within the cleaning script. Primoz 2022-11-02 14:01:21 +0000
  • 30b38bfc02 Fix the generating procedure of ERS file for participants with multiple devices. Primoz 2022-10-28 09:00:13 +0000
  • cd137af15a Config for 30 minute EMA segments. Primoz 2022-10-27 14:20:15 +0000
  • 3c0585a566 Remove obsolete comments. Primoz 2022-10-27 14:12:56 +0000
  • 6b487fcf7b Set E4 data yield to 1 if it is over 1. Optimize E4 data_yield script. Primoz 2022-10-27 14:11:42 +0000
  • 5d17c92e54 Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-10-26 14:18:20 +0000
  • a31fdd1479 Start to test empatica_data_yield precieved error. Primoz 2022-10-26 14:18:08 +0000
  • 936324d234 Switch config for 30 minutes event related segments. Primoz 2022-10-26 14:17:27 +0000
  • da0a4596f8 Add additional ESM processing logic for ERS csv extraction. Primoz 2022-10-26 14:16:25 +0000
  • d4d74818e6 Fix a bug - missing time_segment column when df is empty Primoz 2022-10-26 14:14:32 +0000
  • 14ff59914b Fix to correct dtypes. Primoz 2022-10-26 09:59:46 +0000
  • 6ab0ac5329 Optimize memory consumption with dtype definition while reading csv file. Primoz 2022-10-26 09:57:26 +0000
  • 0d143e6aad Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-10-25 15:28:27 +0000
  • 8acac50125 Add safenet when features dataframe is empty. Primoz 2022-10-25 15:26:43 +0000
  • b92a3aa37a Remove unwanted output or other error producing code. Primoz 2022-10-25 15:25:22 +0000
  • bfd637eb9c Improve strings formatting in straw_events file. Primoz 2022-10-25 08:53:44 +0000