94c72e3172
Added more keyboard features.
2021-04-01 20:54:13 -04:00
1ea5b74eff
Fix the bug of utils.py when one participant have multi timezones
2021-03-31 19:34:14 -04:00
c48c1c8f24
Optimize Barnett's computation multi-day segments
2021-03-28 15:29:07 -04:00
d0858f8833
Fix overlapping periodic time segments
2021-03-28 15:29:07 -04:00
cfc5039918
Fixed the empty dataframe case in infer_home_locations.py and added array condition in doryab location
2021-03-19 11:15:57 -04:00
294d84277d
Fix bug of sleep intraday PRICE provider when the dataframe of a segment is empty
2021-03-17 15:21:31 -04:00
4c2f60fffd
Fix bugs in readable datetime and screen episodes
2021-03-16 20:01:43 -04:00
4528ab3641
Replace SRC LANGUAGE and FOLDER with SCRIPT
2021-03-14 22:14:13 -04:00
d529490999
Migrate fitbit features to new data stream
2021-03-12 12:38:36 -05:00
f65e3c8b1a
Migrate empatica sensors to new data stream
2021-03-11 14:35:34 -05:00
fb054b539f
Add support for multiple time zones
2021-03-11 14:35:34 -05:00
aac87311e8
Update socialjetlag feature of sleep intraday: replace bedtime with midpoint sleep
2021-03-04 15:49:25 -05:00
7b4598357d
Update the PRICE provider's example in sleep intraday docs
2021-02-26 17:47:01 -05:00
716ff3c592
Fix PRICE provider's bug when input is an empty dataframe
2021-02-26 17:47:01 -05:00
d74196cab4
Add sleep intraday features with PRICE provider
2021-02-26 17:47:01 -05:00
bedf7106e5
Fix sleep episodes bug
2021-02-26 17:47:01 -05:00
8377c12efb
Add sleep intraday features with RAPIDS provider
2021-02-26 17:47:01 -05:00
3d6caea6c4
Added the timeathome feature using infer_home_location.py as interim file.
2021-02-24 16:57:25 -05:00
faefca8b9a
Fix extra index column when dataset is empty
2021-02-21 17:32:41 -05:00
2e46f56111
Empatica zips must be placed in pid folder and small fixes
2021-02-21 17:32:41 -05:00
a26a44819a
Add stats features for empatica bvp, eda, ibi, temp
...
Fix Snakefile file indentention
2021-02-21 17:32:41 -05:00
4469cfd6bb
add stats features for bvp, eda, ibi, temp
2021-02-21 17:32:41 -05:00
c6dc7e675a
Add stats features for empatica heartrate
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Turn off all empatica compute features
2021-02-21 17:32:41 -05:00
3bb0230bac
Add statistic features for empatica accelerometer
2021-02-21 17:32:41 -05:00
8c726f5d4f
Start empatica support
2021-02-21 17:32:41 -05:00
b67f990816
Add new `FITBIT_DATA_YIELD` `RAPIDS` provider
2021-02-02 18:30:21 -05:00
9b248c449d
Fixing and adding MAXIMUM_ROW_DURATION.
2021-02-02 11:38:13 -05:00
e7fc8f44f2
Removing Sampling Frequency and fixing ROG, location entropy and normalized location entropy.
2021-02-02 11:38:08 -05:00
0bbf15f52e
Fixed the features dependent on time duration.
2021-02-02 11:36:14 -05:00
f83c5a585e
Fix HR intraday bug: minutesonZONE features are 0
2021-02-01 13:57:12 -05:00
dbf57f43f3
Updated battery feature and its testing for periodic
2021-01-31 20:24:43 -05:00
25a3492eba
Drop rows without "assigned_segments" column before feature extraction
2021-01-21 19:41:17 -05:00
797de54b34
Fix merge bug of fetch_provider_features() function
2021-01-21 14:58:31 -05:00
d0fe4d4c28
Add ALL_RESAMPLED flag and accuracy limit
2021-01-14 14:34:25 -05:00
38fadbf202
Feature/doryab location clustering ( #111 )
...
* Added OPTICS - lightweight clustering algorithm.
* Changed the error message for inconsistent parameters in CONFIG
* Removing hardcoded values and changing default EPS value in the clustering algorithm.
* Added Observation in Doryab Feature docs.
Co-authored-by: nikunjgoel95 <nikunjgoel2009@gmail.com>
2021-01-14 14:22:51 -05:00
b7ba3c6407
Feature/location doryab fix ( #109 )
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* Fixing the doryab location features for context of clustering.
* Fixed the wrong shifting while calculating the distance.
* Refractoring the haversine function
* Removed comments.
* Cleaning parts of the code.
* Updated the documentation for CLUSTER_ON parameter.
Co-authored-by: nikunjgoel95 <nikunjgoel2009@gmail.com>
2021-01-07 16:20:46 -05:00
51c7739bfc
Revert "Start support for phone_keyboard"
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This reverts commit dd95b4f941
2020-12-20 16:29:40 -05:00
dd95b4f941
Start support for phone_keyboard
2020-12-14 13:42:22 -05:00
63202c62cc
Fix BT doryab bug and update change log
2020-12-12 17:11:48 -05:00
05627296f4
Fix filter_data_by_segment bug
2020-12-12 17:10:59 -05:00
5bd1bfe856
Add new bluetooth doryab features and deprecate rapids provider
2020-12-12 17:01:46 -05:00
266dd28d02
Add bluetooth doryab features
2020-12-11 12:03:22 -05:00
614e759551
Refactor day segments to time segments
2020-12-02 18:41:03 -05:00
016bdbfe8c
Update Python feature scripts to add sensor and provider names automatically
2020-11-30 14:42:19 -05:00
b4a512faf3
Add analysis example workflow
2020-11-25 16:34:05 -05:00
ced3305ddb
Update R feature scripts to add sensor and provider names automatically
2020-11-25 14:49:42 -05:00
f02ca2624d
Add phone yield sensor
2020-11-24 19:12:16 -05:00
767e838c87
Fix HR&Sleep bugs
2020-11-24 13:43:24 -05:00
deba6b9e4f
Update sleep summary features for segments
2020-11-23 12:01:00 -05:00
10384204a1
Update Fitbit HR feature name
2020-11-20 11:31:16 -05:00
d3241c79f1
Update filter_data_by_segment() function: call chunk_episodes() inside the filter function
2020-11-19 17:27:53 -05:00
a71efd6b85
Split FITBIT_STEPS into FITBIT_STEPS_SUMMARY and FITBIT_STEPS_INTRADAY
2020-11-11 21:16:48 -05:00
9fc36f67e2
Split FITBIT_HEARTRATE into FITBIT_HEARTRATE_SUMMARY and FITBIT_HEARTRATE_INTRADAY
2020-11-11 17:27:46 -05:00
39632c66f5
Update steps features for segments
2020-10-30 18:57:04 -04:00
7f7eac0769
Merge branch 'ds2' into day_segments
2020-10-28 17:53:00 -04:00
c5197b6c5f
Merge branch 'master' into ds2
2020-10-28 17:50:37 -04:00
93055dacee
Update HR main.py
2020-10-28 17:02:21 -04:00
ed7585c2bf
Update heartrate features for segments
2020-10-27 17:55:57 -04:00
25e1f1fbb5
Update Python chunk_episodes
2020-10-26 18:47:57 -04:00
f0a551164a
Fix AR names
2020-10-26 15:44:21 -04:00
234588c94d
Expose episode threshold between rows parameter
2020-10-26 15:28:19 -04:00
2fe5a0d822
Update R chunk_episodes
2020-10-26 15:10:32 -04:00
c78ccfced7
Remove microseconds from chuncked date times
2020-10-26 15:03:31 -04:00
2b7bd0ae6e
Modify output format of chunk_episodes() function
2020-10-26 13:00:53 -04:00
86509207ac
Turn off warnings for tidyverse and dplyr
2020-10-23 10:41:00 -04:00
8c0f6a000d
Fix chunk_episodes() bugs: set segment_start_timestamp as int
2020-10-19 19:36:26 -04:00
24bf62a7ab
Update file names
2020-10-19 15:07:12 -04:00
ac9cf92732
Add accelerometer features of PANDA provider
2020-10-13 17:54:53 -04:00
29dcd1f284
Add accelerometer features of RAPIDS provider
2020-10-13 11:42:36 -04:00
dcf1255b4b
Fix runtime bug in Radius of Gyration of Doryab Location.
2020-10-10 13:26:06 -04:00
3996e0ab17
Fix bug when episodes are empty
2020-10-09 17:00:20 -04:00
2c7beec1da
Fix NAs are now 0 in some calls and msgs features
2020-10-08 12:23:54 -04:00
236b1cd809
Update AR module for segments; Refactor input format
2020-10-07 18:11:06 -04:00
80ff3f4229
Cleaning the Doryab location features code to fix the bug of Emoty dataframe in ClusterAndLabel
2020-10-01 11:34:41 -04:00
bccc9a0697
Move deduplicate_episodes() function into chunk_episodes() function; rename "time_diff" with duration
2020-09-29 18:05:25 -04:00
39f6e3841c
Update AR episode computation
2020-09-29 17:26:43 -04:00
10b0386c8f
Merge branch 'day_segments' of https://github.com/carissalow/rapids into day_segments
2020-09-29 17:24:41 -04:00
f1717e59e7
Update screen&battery episodes features with different segment format
2020-09-29 17:13:34 -04:00
499b92e240
Fix missing R library
2020-09-29 15:35:44 -04:00
0dafdd1340
Redo resample episodes in R, new battery episodes
2020-09-29 15:18:48 -04:00
a6b99259f7
Fix bug when filtering by day segment and there are no rows belonging to that segment
2020-09-28 15:53:38 -04:00
4f64f7eeef
Fix the bug on ClusterAndLabel when recieving empty data.
2020-09-28 15:02:03 -04:00
9e15f46fc3
Update day segment format
2020-09-28 11:38:47 -04:00
303d1472ed
Change how we compute AR episodes
2020-09-22 17:32:51 -04:00
a851a460e4
Change the way we compute battery episodes
2020-09-22 16:53:51 -04:00
f806cb44ac
Fix the bug of screen duration features for different segments
2020-09-18 20:25:29 -04:00
ca14eba8e1
Initial testing restructure for 30mins segments
2020-09-18 19:14:07 -04:00
06bb2b9c73
Fix accuracy bug in barnett location features
2020-09-18 11:26:10 -04:00
e7db230426
New Application_foreground testing & bugfixes
2020-09-11 17:55:09 -04:00
d4c56642c7
New testing and bug fix for conversation features
2020-09-10 14:01:32 -04:00
a25849f7a4
Fix timeattop location name bug
2020-09-09 11:17:49 -04:00
cf2a8f13a3
New testing and minor bug fix for light
2020-09-04 12:33:13 -04:00
1ed85f1180
Delete unused files
2020-09-02 14:12:53 -04:00
98ebf9bd13
Migrate conversation to new file structure
2020-09-01 17:07:07 -04:00
8d87f6e497
Migrate app foreground to new file structure
2020-09-01 15:25:35 -04:00
681a77f23c
Clean utils.py
2020-09-01 12:02:31 -04:00
d674010e08
Rename param to provider
2020-09-01 12:01:45 -04:00
e643881058
Migrate light to new file structure
2020-09-01 12:01:24 -04:00
eda58d9d2c
Migrate wifi to new file structure
2020-08-31 18:51:06 -04:00
77d9d8f025
Migrate bluetooth to new file structure
2020-08-31 17:08:26 -04:00
132311da77
Migrate messages to new file structure
2020-08-31 13:34:15 -04:00
148301d468
Testing, test docs and bugfixes for conversation
2020-08-28 18:28:00 -04:00
e269062439
Migrate calls to new provider file structure
2020-08-28 17:50:49 -04:00
011b9736d5
Refactor the function to fetch provider features
2020-08-28 17:40:23 -04:00
b0f1477d7e
Migrate location providers to new file structure and segments
2020-08-28 13:53:00 -04:00
3052693573
Add missing entropy lib to call features
2020-08-26 13:04:02 -04:00
c3a6b1f9a2
Fix to calls change segment label column name
2020-08-26 13:02:27 -04:00
14d2d694ce
Migrate messages to new segments
2020-08-26 13:01:58 -04:00
31ec5b0da4
Finalise new day segment structure with calls as example
2020-08-26 12:09:53 -04:00
6a5470e338
Splitting Energy Feature in Conversation to Voice and Noise.
2020-08-23 13:20:19 -04:00
026d056378
Simplify window workflow
2020-08-20 14:51:22 -04:00
a0b5b5982b
Setup rules and files to support multiple
2020-08-20 14:45:09 -04:00
f5ea5c3116
Conversation testing, testing_docs & minor bugfix
2020-08-13 18:36:38 -04:00
1ad8bb0365
Add testing, test docs and minor fixes for AR
2020-08-13 13:41:45 -04:00
622d2997c3
Fixed the time first and last conversation features bug.
2020-08-13 12:45:08 -04:00
a3cd341bf2
Fixed the zero conversation time issues.
2020-08-11 20:24:21 -04:00
2859a53202
Small necessary changes in Location Doryab Features.
2020-08-05 13:39:37 -04:00
38b3f55ab8
Added 'sampling_frequency' in Documentation.
2020-08-05 13:14:31 -04:00
df7a52cd6c
Added Sampling Frequency to Doryab Location Features.
2020-08-05 13:02:34 -04:00
8cfe2dabb7
Improved code for radius of gyration in location features.
2020-08-05 12:06:39 -04:00
2f4c137bc1
fixed the bug "Radius of Gyration"
2020-08-03 18:28:02 -04:00
dbc51de4e3
Updated WIFI testing, bugfix and docs
2020-07-29 14:14:47 -04:00
388f09a003
Add missing wifi table
2020-07-24 16:35:41 -04:00
5f771618ae
Add screen episode filter parameters
2020-07-23 14:38:59 -04:00
faad8f5a8f
Added minutes of data in a day/epoch.
2020-07-23 14:23:32 -04:00
0ada1292ed
Added maximum_gap_allowed parameter
2020-07-21 18:56:43 -04:00
c86efb19d6
Fix location_doryab bug: same location all day
2020-07-21 15:47:48 -04:00
1614d577b8
Fixed the Conversation Duration bug.
2020-07-20 16:52:21 -04:00
4f885ef7b7
Modify dropDatesSameLocationAllDay() function in Doryab's location section
2020-07-20 09:58:34 -04:00
6c1b93efa9
Update function name of location_base.py
2020-07-19 21:50:12 -04:00
923a5213ef
Fix warning of location_doryab
2020-07-17 20:18:48 -04:00
024ae1a549
Added Doryab's location features to rapids.
...
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-07-16 14:26:43 -04:00
4f256115c5
Apps_foreground, bugfixes, testing & testcase docs
2020-07-16 13:14:28 -04:00
6d37402ee4
Added Light Bugfix, testing and testcase docs
2020-07-10 14:01:19 -04:00
9ca54f930d
WIFI Bug fix and testing
2020-07-07 17:15:32 -04:00
f24d2876fc
Fixed bluetooth bug and added feeature testing
2020-07-06 18:11:28 -04:00
06edf53016
Add support for multi-platform participants
2020-06-30 17:34:18 -04:00
9811b8a34c
Fix screen firstuseafter feature
2020-06-30 14:52:23 -04:00
234dfec1fa
Fix minor bug of conversation_base.py
2020-06-29 20:29:49 -04:00
47369c4b2d
Fix minor bug of applications_forground_base.py
2020-06-29 20:24:00 -04:00
29b04b0601
Fix step bouts features
2020-06-26 17:33:30 -04:00
533d0adab3
Updated sms sensor to messages
2020-06-26 12:20:47 -04:00
17f41588d8
Fix the bug of feature extraction code for some sensors: break when there is no data for an epoch
2020-06-26 11:25:25 -04:00
e66ed6a79b
Fix the accelerometer bug: without evening data
2020-06-25 18:43:24 -04:00
84b9bd4e12
Merge branch 'master' of https://github.com/carissalow/rapids
2020-06-25 16:23:04 -04:00
d48db18f95
Fix the bug of missing sleep features of some dates
2020-06-25 16:22:49 -04:00
929db5515c
Adding countConversation and Fixing duplicate bugs in data.
...
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-06-24 17:02:47 -04:00
b795d1a022
Refactor wifi features
2020-06-24 15:46:27 -04:00
b2347ecf03
Refactor bluetooth features
2020-06-24 15:10:42 -04:00
1bdb52dd65
Add functionality to exlcude step data based on sleep
2020-06-24 13:33:58 -04:00
nikunjgoel95
Meng Li
JulioV
Joe Kim
abhineethreddyk
kaguillera