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• 0d81ad5756 Debug assignment of segments to rows Primoz 2022-10-19 13:35:04 +0000
• cea451d344 Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-10-18 09:15:06 +0000
• e88bbd548f Add new daily segment and filter by segment in the cleaning script. Primoz 2022-10-18 09:15:00 +0000
• cf38d9f175 Implement ERS generating logic. Primoz 2022-10-17 15:07:33 +0000
• f3ca56cdbf Start with ERS logic integration within Snakemake. Primoz 2022-10-14 14:46:28 +0000
• 797aa98f4f Config for ERS testing. Primoz 2022-10-12 15:51:50 +0000
• 9baff159cd Changes needed for testing and starting of the Event-Related Segments. Primoz 2022-10-12 15:51:23 +0000
• 0f21273508 Bugs fix Primoz 2022-10-12 12:32:51 +0000
• 55517eb737 Necessary commit before proceeding. Primoz 2022-10-12 12:23:11 +0000
• de15a52dba Bug fix Primoz 2022-10-11 08:36:23 +0000
• 1ad25bb572 Few modifications of some imputation values in cleaning script and feature extraction. Primoz 2022-10-11 08:26:17 +0000
• 9884b383cf Testing new data with AutoML. Primoz 2022-10-10 16:45:38 +0000
• 2dc89c083c Small changes in cleaning overall Primoz 2022-10-07 08:52:12 +0000
• 001d400729 Clean features and create input files based on all possible targets. Primoz 2022-10-06 14:28:12 +0000
• 1e38d9bf1e Standardization and correlation visualization in overall cleaning script. Primoz 2022-10-06 13:27:38 +0000
• a34412a18d E4 data yield corrections. Changes in overal cs - standardization. Primoz 2022-10-05 14:16:55 +0000
• 437459648f Errors fix: individual script - treat participants missing data. Primoz 2022-10-05 13:35:05 +0000
• 53f6cc60d5 Config and cleaning script necessary changes ... Primoz 2022-10-03 13:06:39 +0000
• bbeabeee6f Last changes before processing on the server. Primoz 2022-10-03 12:53:31 +0000
• 44531c6d94 Code cleaning, reworking cleaning individual based on changes in overall script. Changes in thresholds. Primoz 2022-09-30 10:04:07 +0000
• 7ac7cd5a37 Preparation of the overall cleaning script. Primoz 2022-09-29 14:33:21 +0000
• 68fd69dada Cleaning script for individuals: corrections and comments. Primoz 2022-09-29 11:55:25 +0000
• a4f0d056a0 Fillna for app foreground and activity recognition Primoz 2022-09-29 11:44:27 +0000
• 6286e7a44c firstuseafter column removed from contextual imputation Primoz 2022-09-28 12:47:08 +0000
• 9b3447febd Contextual imputation correction Primoz 2022-09-28 12:40:05 +0000
• d6adda30cf Contextual imputation on time(first/last) features. Primoz 2022-09-28 12:37:51 +0000
• 8af4ef11dc Contextual imputation by feature type. Primoz 2022-09-28 10:02:47 +0000
• 536b9494cd Cleaning script corrections Primoz 2022-09-27 14:12:08 +0000
• f0b87c9dd0 Debugging of the empatica data yield integration. Primoz 2022-09-27 09:54:15 +0000
• 7fcdb873fe Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-09-27 07:50:29 +0000
• 5c7bb0f4c1 Config changes Primoz 2022-09-27 07:48:32 +0000
• bd53dc1684 Empatica data yield usage in the cleaning script. Primoz 2022-09-26 15:54:00 +0000
• d9a574c550 Changes in the cleaning script and preparation of empatica data yield method. Primoz 2022-09-23 13:24:50 +0000
• 19aa8707c0 Redefined cleaning steps after revision Primoz 2022-09-22 13:45:51 +0000
• 247d758cb7 Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-09-21 07:18:01 +0000
• 90ee99e4b9 Remove TODO comments Primoz 2022-09-21 07:16:00 +0000
• 7493aaa643 Small changes in cleaning scrtipt and missing vals testing. Primoz 2022-09-20 12:57:55 +0000
• eaf4340afd Small imputation and cleaning corrections. Primoz 2022-09-20 08:03:48 +0000
• a96ea508c6 Fill NaN of Empatica's SD second order feature (must be tested). Primoz 2022-09-19 07:34:02 +0000
• 52e11cdcab Configurations for new standardization path. Primoz 2022-09-19 07:25:54 +0000
• 92aff93e65 Remove standardization script. Primoz 2022-09-19 07:25:16 +0000
• 18b63127de Removed all standardizaton rules and configurations. Primoz 2022-09-19 06:16:26 +0000
• 62982866cd Phone wifi visible inspection (WIP) Primoz 2022-09-16 13:24:21 +0000
• 0ce6da5444 kNN imputation relocation and execution only on specific columns. Primoz 2022-09-16 11:30:08 +0000
• e3b78c8a85 Impute selected phone features with 0. Wifi visible, screen, and light. Primoz 2022-09-16 10:58:57 +0000
• 7d85f75d21 Changes in phone features NaN values script. Primoz 2022-09-16 09:03:30 +0000
• 385e21409d Changes in NaN values testing script. Primoz 2022-09-15 14:16:58 +0000
• 18002f59e1 Doryab bluetooth and locations features fill in NaN values. Primoz 2022-09-15 10:48:59 +0000
• 3cf7ca41aa Merge branch 'imputation_and_cleaning' of https://repo.ijs.si/junoslukan/rapids into imputation_and_cleaning Primoz 2022-09-14 15:38:32 +0000
• d5ab5a0394 Writing testing scripts to determine the point of manual imputation. Primoz 2022-09-14 14:13:03 +0000
• dfbb758902 Changes in AutoML params and environment.yml Primoz 2022-09-13 13:54:06 +0000
• 4ec371ed96 Testing auto-sklearn Primoz 2022-09-13 09:51:03 +0000
• d27a4a71c8 Reorganisation and reordering of the cleaning script. Primoz 2022-09-12 13:44:17 +0000
• 15d792089d Changes in cleaning script: - target extracted from config to remove rows where target is nan - prepared sns.heatmap for further missing values analysis - necessary changes in config and participant p01 - picture of heatmap which shows the values state after cleaning Primoz 2022-09-01 10:33:36 +0000
• cb351e0ff6 Unnecessary line (rows with no target value will be removed in cleaning script). Primoz 2022-09-01 10:06:57 +0000
• 86299d346b Impute phone and sms NAs with 0 Primoz 2022-09-01 09:57:21 +0000
• 3f7ec80c18 Preparation a) phone_calls 0 imputation b) remove rows with NaN target Primoz 2022-08-31 10:18:50 +0000
• f78aa3e7b3 Preparation for cleaning & imputation Primoz 2022-08-26 10:56:14 +0000
• a620def209 Generate standardized model input files (NOTE: commented unstandardized sections!) Primoz 2022-08-24 13:42:39 +0000
• c498ecb742 Include baseline models (+corrections), disable columns drop in cleaning function. Primoz 2022-08-23 14:12:14 +0000
• f088e9586f Handle empty ACC.csv Primoz 2022-08-22 14:20:47 +0000
• 0aa0e82673 Handle empty Empatica csv files. Primoz 2022-08-22 14:18:12 +0000
• 4cfe5a3a98 Disable discarding rows if DATA_YIELD_RATIO_THRESHOLD==0. Primoz 2022-08-19 13:10:56 +0000
• 48578d8800 Add esm_SAM (only copied?). models junos 2022-08-19 14:02:54 +0200
• 607da820f2 Configuration and cleaning changes Primoz 2022-08-18 14:21:05 +0000
• fb577bc9ad Squashed commit of the following: Primoz 2022-07-22 15:31:30 +0000
• 6ba4a66deb Squashed commit of the following: Primoz 2022-07-20 13:51:22 +0000
• 788ac31190 Bug fix: if df has no rows write an empty zscore file. Primoz 2022-07-08 10:40:45 +0000
• 21eb2665d7 README: few changes. Primoz 2022-07-08 10:40:08 +0000
• a65a85cce9 Merge branch 'empatica_calculating_features' Primoz 2022-07-07 15:35:47 +0000
• fa961fe2f5 gitignore Primoz 2022-07-07 15:34:31 +0000
• 6c8014ba8e Updated R and Python package files. Updated README. Primoz 2022-07-07 15:30:07 +0000
• 5a777ac79f Working version that integrates both phone and empatica feature calculations. Primoz 2022-07-07 15:00:47 +0000
• 0425403951 Merge branch 'master' of https://repo.ijs.si/junoslukan/rapids Primoz 2022-07-06 11:53:31 +0000
• 887fd7dc72 Merge branch 'empatica_calculating_features' Primoz 2022-07-06 11:53:21 +0000
• 5a4696c548 Misc. changes Primoz 2022-07-06 11:30:18 +0000
• d2758eef46 Set not NaN sum insted of 0 sum for HRV features windows. Primoz 2022-07-06 07:36:35 +0000
• 2d5d23b615 Testing files change and remove standardization from hrv sensors main files. Primoz 2022-07-06 07:35:39 +0000
• a5480f1369 Few changes during addition to file structure. Primoz 2022-07-04 13:00:47 +0000
• 505c3a86b9 Testing different EDA findPeaks parameters. Primoz 2022-06-30 15:15:37 +0000
• ce04394679 Merge commit 'c05b047c2d9452151553961928c846c01d7395bc' junos 2022-06-25 20:06:24 +0200
• c851ab0763 Fill EDA NaN values where numPeak is zero. Other small changes. Primoz 2022-06-21 14:09:49 +0000
• a8cd16f88c Debugging eda_explorer Primoz 2022-06-16 11:32:59 +0000
• dda4554d46 Various small changes. Primoz 2022-06-15 13:57:46 +0000
• 212cf300f8 Debugging EDA signal - preliminary step for imputation. Primoz 2022-06-14 15:09:14 +0000
• 9ea39dc557 Standardization as a Snakefile's rule enabled for all E4 sensors. Primoz 2022-06-13 18:17:30 +0000
• 402059871f Making standardization as a rule. WIP: done only for BVP. Primoz 2022-06-13 14:12:03 +0000
• 094743244d Added SO feature for sum all rows that are non zero for BVP and IBI sensors. Primoz 2022-06-13 10:51:22 +0000
• e1d7607de4 Extraction of additional SO features. Min/max has been changed to nsmallest/nlargest means. primoz 2022-06-10 12:34:48 +0000
• f371249b99 First order features standardization WIP primoz 2022-06-09 13:35:15 +0000
• 64e41cfa35 Second order features standardization in config.yaml. primoz 2022-06-07 10:39:48 +0000
• 2c7ac21465 Added standardization on SO features. primoz 2022-06-06 13:51:15 +0000
• 2acf6ff9fb Exception handling in case of empty ibi. Changes of the method EDA uses in main.py. Other small corrections. primoz 2022-06-03 12:34:36 +0000
• d300f0f8f0 Fixed RAPIDS bug: error when IBI.csv is empty. primoz 2022-06-02 11:43:49 +0000
• fbf6a77dfc Small misc changes Primoz 2022-06-02 06:41:53 +0000
• 5532043b1f Patching IBI with BVP - completed. Primoz 2022-05-25 19:39:47 +0000
• bb62497ba6 Patching IBI with BVP - selecting appropriate pipeline entry point. WIP Primoz 2022-05-24 11:07:18 +0000
• 2a8f58f5c8 Patching IBI with BVP. WIP Primoz 2022-05-20 13:18:45 +0000
• 1471c86c62 Cr-features version update in rapids venv. Primoz 2022-05-13 13:37:12 +0000
• 6864cfe775 Changes after thorough testing with available data. Primoz 2022-05-13 13:35:34 +0000