JulioV
|
7f7eac0769
|
Merge branch 'ds2' into day_segments
|
2020-10-28 17:53:00 -04:00 |
JulioV
|
c5197b6c5f
|
Merge branch 'master' into ds2
|
2020-10-28 17:50:37 -04:00 |
Meng Li
|
93055dacee
|
Update HR main.py
|
2020-10-28 17:02:21 -04:00 |
JulioV
|
f36a7052b3
|
Add config update file to create participants file
|
2020-10-28 14:11:41 -04:00 |
JulioV
|
8f74d3f3b7
|
Minor updates to config and Snakefile
|
2020-10-28 14:03:02 -04:00 |
Meng Li
|
ed7585c2bf
|
Update heartrate features for segments
|
2020-10-27 17:55:57 -04:00 |
JulioV
|
d5931c75d8
|
Refactor script to create participants files
|
2020-10-27 17:13:16 -04:00 |
JulioV
|
b986599226
|
Add support to read fitbit data from csv files
|
2020-10-26 17:17:53 -04:00 |
JulioV
|
f1ddfae04f
|
Fix missing params battery and AR
|
2020-10-26 15:51:22 -04:00 |
JulioV
|
47adb8bc4b
|
Add tz support to fitbit
|
2020-10-22 14:38:40 -04:00 |
JulioV
|
cff83a7ceb
|
Implement parse fitbit data
|
2020-10-22 13:08:52 -04:00 |
JulioV
|
c266f6dd10
|
Update participant files structure and fitbit download rule
|
2020-10-20 19:12:01 -04:00 |
JulioV
|
24bf62a7ab
|
Update file names
|
2020-10-19 15:07:12 -04:00 |
Meng Li
|
ac9cf92732
|
Add accelerometer features of PANDA provider
|
2020-10-13 17:54:53 -04:00 |
Meng Li
|
29dcd1f284
|
Add accelerometer features of RAPIDS provider
|
2020-10-13 11:42:36 -04:00 |
Meng Li
|
236b1cd809
|
Update AR module for segments; Refactor input format
|
2020-10-07 18:11:06 -04:00 |
Meng Li
|
f1717e59e7
|
Update screen&battery episodes features with different segment format
|
2020-09-29 17:13:34 -04:00 |
Meng Li
|
f806cb44ac
|
Fix the bug of screen duration features for different segments
|
2020-09-18 20:25:29 -04:00 |
JulioV
|
4dc8d38c66
|
Optimise assign to day segment
|
2020-09-16 14:54:20 -04:00 |
JulioV
|
3c45f6b152
|
Refactor assign to day segment
|
2020-09-14 14:21:36 -04:00 |
kaguillera
|
441cdf69c3
|
Fix Travis attempt 4
|
2020-09-03 14:36:42 -04:00 |
kaguillera
|
67d11e449f
|
Fix Travis attempt 3
|
2020-09-03 14:18:01 -04:00 |
kaguillera
|
4be8accc45
|
Attempt to fix Travis 2
|
2020-09-03 13:44:07 -04:00 |
kaguillera
|
0613bcb4b8
|
Attempt to fix Travis 1
|
2020-09-03 13:19:44 -04:00 |
kaguillera
|
5d3e6efc41
|
New Bluetooth Testing
|
2020-09-03 12:04:29 -04:00 |
JulioV
|
98ebf9bd13
|
Migrate conversation to new file structure
|
2020-09-01 17:07:07 -04:00 |
JulioV
|
8d87f6e497
|
Migrate app foreground to new file structure
|
2020-09-01 15:25:35 -04:00 |
JulioV
|
e643881058
|
Migrate light to new file structure
|
2020-09-01 12:01:24 -04:00 |
JulioV
|
eda58d9d2c
|
Migrate wifi to new file structure
|
2020-08-31 18:51:06 -04:00 |
JulioV
|
77d9d8f025
|
Migrate bluetooth to new file structure
|
2020-08-31 17:08:26 -04:00 |
JulioV
|
132311da77
|
Migrate messages to new file structure
|
2020-08-31 13:34:15 -04:00 |
JulioV
|
e269062439
|
Migrate calls to new provider file structure
|
2020-08-28 17:50:49 -04:00 |
JulioV
|
b0f1477d7e
|
Migrate location providers to new file structure and segments
|
2020-08-28 13:53:00 -04:00 |
JulioV
|
31ec5b0da4
|
Finalise new day segment structure with calls as example
|
2020-08-26 12:09:53 -04:00 |
nikunjgoel95
|
6a5470e338
|
Splitting Energy Feature in Conversation to Voice and Noise.
|
2020-08-23 13:20:19 -04:00 |
JulioV
|
026d056378
|
Simplify window workflow
|
2020-08-20 14:51:22 -04:00 |
JulioV
|
a0b5b5982b
|
Setup rules and files to support multiple
|
2020-08-20 14:45:09 -04:00 |
Meng Li
|
7a4218a3ce
|
Delete analysis section of config.yaml
|
2020-08-13 17:12:05 -04:00 |
JulioV
|
3f48a47a14
|
Fix optional input files for phone sensed bins
|
2020-08-11 18:02:52 -04:00 |
nikunjgoel95
|
df7a52cd6c
|
Added Sampling Frequency to Doryab Location Features.
|
2020-08-05 13:02:34 -04:00 |
Meng Li
|
c2b25a146d
|
Replace sensor name with table name in heatmap_days_by_sensors section
|
2020-08-03 15:19:45 -04:00 |
Meng Li
|
e13b89b125
|
Add restore_sql_file rule; notsummarised module; diff platforms for heatmap_days_by_sensors
|
2020-08-03 13:09:16 -04:00 |
Meng Li
|
93157db210
|
Data cleaning section: replace "day_type" with "day_idx"
|
2020-07-27 18:27:36 -04:00 |
Meng Li
|
af6678c70c
|
Update visualization section: add MIN_VALID_BINS_PER_HOUR
|
2020-07-26 20:11:25 -04:00 |
JulioV
|
388f09a003
|
Add missing wifi table
|
2020-07-24 16:35:41 -04:00 |
Meng Li
|
b3aa4d82e1
|
Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously)
|
2020-07-24 12:58:48 -04:00 |
JulioV
|
5f771618ae
|
Add screen episode filter parameters
|
2020-07-23 14:38:59 -04:00 |
nikunjgoel95
|
faad8f5a8f
|
Added minutes of data in a day/epoch.
|
2020-07-23 14:23:32 -04:00 |
Meng Li
|
b0354393ae
|
Add "corr_method" param to heatmap_features_correlations.py
|
2020-07-22 20:00:14 -04:00 |
Meng Li
|
c135b6ef78
|
Add visualization for data exploration
|
2020-07-22 16:47:32 -04:00 |
Meng Li
|
124843f96e
|
Make phone_valid_sensed_days rule works for different min_valid_hours_per_day thresholds
|
2020-07-21 20:41:24 -04:00 |
nikunjgoel95
|
0ada1292ed
|
Added maximum_gap_allowed parameter
|
2020-07-21 18:56:43 -04:00 |
JulioV
|
e37b07098f
|
Fix defaults for Doryab's location features
|
2020-07-20 16:03:51 -04:00 |
kaguillera
|
c8d8906359
|
Attempt to fix travis 1.2
|
2020-07-20 10:32:04 -04:00 |
kaguillera
|
9deb6eae5f
|
Attempt to fix travis
|
2020-07-20 10:20:20 -04:00 |
nikunjgoel95
|
024ae1a549
|
Added Doryab's location features to rapids.
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-07-16 14:26:43 -04:00 |
JulioV
|
d2704296f3
|
Refactor valid sensed bins and days
|
2020-07-09 13:01:50 -04:00 |
JulioV
|
b381672cae
|
Update config.yaml
|
2020-06-29 13:50:33 -04:00 |
Meng Li
|
62f862a738
|
Fix default for ACCELEROMETER VALID_SENSED_MINUTES
|
2020-06-26 17:35:29 -04:00 |
Meng Li
|
29b04b0601
|
Fix step bouts features
|
2020-06-26 17:33:30 -04:00 |
kaguillera
|
533d0adab3
|
Updated sms sensor to messages
|
2020-06-26 12:20:47 -04:00 |
nikunjgoel95
|
0c53fd275e
|
Required changes in config
|
2020-06-24 17:03:14 -04:00 |
JulioV
|
8c647b3b4c
|
Fix default for STEP EXCLUDE_SLEEP
|
2020-06-24 13:40:15 -04:00 |
JulioV
|
1bdb52dd65
|
Add functionality to exlcude step data based on sleep
|
2020-06-24 13:33:58 -04:00 |
Meng Li
|
8aa25144f0
|
Refactor analysis part of snakefile
|
2020-06-23 20:46:42 -04:00 |
kaguillera
|
7bcf674793
|
Refactored testing after pipeline refactoring
|
2020-06-23 18:29:01 -04:00 |
JulioV
|
36017d5dca
|
Refactor Snakefile and docs. Rename SMS scripts
|
2020-06-23 11:33:34 -04:00 |
Meng Li
|
4d1ff10701
|
Rename heartrate zone features
|
2020-06-22 14:15:56 -04:00 |
Meng Li
|
99fe86ac2a
|
Rename accelerometer features names
|
2020-06-22 13:47:25 -04:00 |
Meng Li
|
a121c0fe7b
|
Split accelerometer features in config file; drop count; add more stats features
|
2020-06-22 12:01:17 -04:00 |
Meng Li
|
f07ba22f98
|
Minor fix for applications_foreground sensor
|
2020-06-19 16:22:57 -04:00 |
nikunjgoel95
|
1409de2832
|
Added Converstion Features.
Updated config.yaml, Snakefile, Features.Snakefile and documentation.
|
2020-06-19 01:27:28 -04:00 |
Meng Li
|
e133b8b530
|
Refactor fitbit sleep features
|
2020-06-12 18:44:05 -04:00 |
Meng Li
|
dcc7ca14e3
|
Refactor fitbit heartrate features
|
2020-06-12 16:04:03 -04:00 |
JulioV
|
8fbafcbe0c
|
Fix location bug and improve fused resampling
|
2020-06-11 12:25:49 -04:00 |
Meng Li
|
aa1baaf948
|
Refactor activity recognition features
|
2020-06-04 19:32:28 -04:00 |
JulioV
|
5656c673d3
|
Remove varqn and huberm features from calls
|
2020-06-02 19:48:22 -04:00 |
Meng Li
|
8c8378f74a
|
Split modeling module into two rules; Add RandomOverSampler for resampling; Add log; Fix bug of AUC
|
2020-05-15 18:42:03 -04:00 |
Meng Li
|
915bdd04b1
|
Parse Fitbit summary and intraday data; Extract Fitbit daily features from summary data
|
2020-05-15 17:51:00 -04:00 |
Meng Li
|
7cbb227214
|
Add modeling module
|
2020-04-29 18:53:54 -04:00 |
Meng Li
|
9ddb50ed59
|
Split days threshold of data cleaning into days_before_surgery and days_after_discharge
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-29 14:37:40 -04:00 |
Meng Li
|
490599c742
|
Implement AR features for iOS
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-20 18:05:54 -04:00 |
Meng Li
|
5696b4f6d4
|
Add merge module for demographic features and target
|
2020-04-16 14:20:16 -04:00 |
Meng Li
|
eac721de84
|
Add demographic_features and targets module; refactor analysis code
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-16 12:38:28 -04:00 |
Meng Li
|
695984586f
|
Add calories module for fitbit_readable_datetime.py
|
2020-04-15 16:01:02 -04:00 |
JulioV
|
010114c1aa
|
Add wifi features
|
2020-04-13 13:24:52 -04:00 |
Mingze Cao
|
8cc93c8791
|
Refactor battery feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 15:06:25 -05:00 |
Mingze Cao
|
2d7d3bfccf
|
Refactor location_barnett features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 12:20:39 -05:00 |
Mingze Cao
|
c2fbc3ad7a
|
Refactor sms feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 15:02:58 -05:00 |
Mingze Cao
|
97c83caebc
|
Refactor fitbit_heartrate feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 14:31:43 -05:00 |
Mingze Cao
|
a53ba242f8
|
Refactor google_activity_recognition feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:36:36 -05:00 |
Mingze Cao
|
0809001dfa
|
Refactor light features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:02:53 -05:00 |
Mingze Cao
|
f46e8c0666
|
Refactor applications_foreground features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 12:31:43 -05:00 |
Mingze Cao
|
d1c38016de
|
Refactor call features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:51:18 -05:00 |
Mingze Cao
|
e0d19cbc1b
|
Refactor screen features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:05:16 -05:00 |
Mingze Cao
|
3986f4e185
|
Refactor fitbit_step features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-03 16:03:45 -05:00 |
Mingze Cao
|
6045df494d
|
Modify the Accelerometer ‘Metrics’ to Accelerometer ‘Features’
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-02 16:36:28 -05:00 |
Mingze Cao
|
7d770c91f3
|
Add sumdurationsedentarybout of the fitbit_step sensor
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-02 13:36:54 -05:00 |
JulioV
|
0e173872df
|
Refactor select_days_to_analyse, fix merge bugs, add clean metrics for model
|
2020-03-17 21:15:53 -04:00 |
Meng Li
|
7c240a9613
|
Select days to analyse
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-03-17 17:26:30 -04:00 |