JulioV
|
14d2d694ce
|
Migrate messages to new segments
|
2020-08-26 13:01:58 -04:00 |
JulioV
|
31ec5b0da4
|
Finalise new day segment structure with calls as example
|
2020-08-26 12:09:53 -04:00 |
JulioV
|
026d056378
|
Simplify window workflow
|
2020-08-20 14:51:22 -04:00 |
JulioV
|
a0b5b5982b
|
Setup rules and files to support multiple
|
2020-08-20 14:45:09 -04:00 |
Meng Li
|
00385dc54d
|
Discard useless parameters and related code of example
|
2020-08-17 10:48:15 -04:00 |
JulioV
|
b83f8ead44
|
Refactor snakefiles to smk files and create common.smk
|
2020-08-11 18:45:50 -04:00 |
JulioV
|
3f48a47a14
|
Fix optional input files for phone sensed bins
|
2020-08-11 18:02:52 -04:00 |
JulioV
|
08ce250839
|
Unify conversation timestamp for ios
|
2020-08-11 16:18:06 -04:00 |
nikunjgoel95
|
df7a52cd6c
|
Added Sampling Frequency to Doryab Location Features.
|
2020-08-05 13:02:34 -04:00 |
Meng Li
|
973e1669fa
|
Move baselines into a folder; rename column of "num_of_participants" with "num_of_rows" in modeling.py
|
2020-08-05 07:51:35 -04:00 |
Meng Li
|
0b65cc0546
|
Add example_profile
|
2020-08-03 17:30:15 -04:00 |
Meng Li
|
c2b25a146d
|
Replace sensor name with table name in heatmap_days_by_sensors section
|
2020-08-03 15:19:45 -04:00 |
Meng Li
|
e13b89b125
|
Add restore_sql_file rule; notsummarised module; diff platforms for heatmap_days_by_sensors
|
2020-08-03 13:09:16 -04:00 |
Meng Li
|
21c3251066
|
Delete mystudy.snakefile and add all rules to models.snakefile
|
2020-07-29 15:25:26 -04:00 |
Meng Li
|
c498b8d2df
|
Add hours and bins thresholds for analysis section
|
2020-07-27 22:59:32 -04:00 |
Meng Li
|
93157db210
|
Data cleaning section: replace "day_type" with "day_idx"
|
2020-07-27 18:27:36 -04:00 |
Meng Li
|
af6678c70c
|
Update visualization section: add MIN_VALID_BINS_PER_HOUR
|
2020-07-26 20:11:25 -04:00 |
JulioV
|
388f09a003
|
Add missing wifi table
|
2020-07-24 16:35:41 -04:00 |
Meng Li
|
b3aa4d82e1
|
Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously)
|
2020-07-24 12:58:48 -04:00 |
JulioV
|
5f771618ae
|
Add screen episode filter parameters
|
2020-07-23 14:38:59 -04:00 |
nikunjgoel95
|
faad8f5a8f
|
Added minutes of data in a day/epoch.
|
2020-07-23 14:23:32 -04:00 |
Meng Li
|
b0354393ae
|
Add "corr_method" param to heatmap_features_correlations.py
|
2020-07-22 20:00:14 -04:00 |
Meng Li
|
c135b6ef78
|
Add visualization for data exploration
|
2020-07-22 16:47:32 -04:00 |
Meng Li
|
124843f96e
|
Make phone_valid_sensed_days rule works for different min_valid_hours_per_day thresholds
|
2020-07-21 20:41:24 -04:00 |
nikunjgoel95
|
0ada1292ed
|
Added maximum_gap_allowed parameter
|
2020-07-21 18:56:43 -04:00 |
nikunjgoel95
|
024ae1a549
|
Added Doryab's location features to rapids.
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-07-16 14:26:43 -04:00 |
JulioV
|
d2704296f3
|
Refactor valid sensed bins and days
|
2020-07-09 13:01:50 -04:00 |
JulioV
|
06edf53016
|
Add support for multi-platform participants
|
2020-06-30 17:34:18 -04:00 |
JulioV
|
6608e47918
|
Fix conversation plugin bug that mixed android tables with ios
|
2020-06-25 16:38:24 -04:00 |
JulioV
|
1bdb52dd65
|
Add functionality to exlcude step data based on sleep
|
2020-06-24 13:33:58 -04:00 |
JulioV
|
36017d5dca
|
Refactor Snakefile and docs. Rename SMS scripts
|
2020-06-23 11:33:34 -04:00 |
Meng Li
|
a121c0fe7b
|
Split accelerometer features in config file; drop count; add more stats features
|
2020-06-22 12:01:17 -04:00 |
nikunjgoel95
|
1409de2832
|
Added Converstion Features.
Updated config.yaml, Snakefile, Features.Snakefile and documentation.
|
2020-06-19 01:27:28 -04:00 |
Meng Li
|
e133b8b530
|
Refactor fitbit sleep features
|
2020-06-12 18:44:05 -04:00 |
Meng Li
|
dcc7ca14e3
|
Refactor fitbit heartrate features
|
2020-06-12 16:04:03 -04:00 |
JulioV
|
8fbafcbe0c
|
Fix location bug and improve fused resampling
|
2020-06-11 12:25:49 -04:00 |
Meng Li
|
0115fd14f6
|
Refactor fitbit step features
|
2020-06-05 21:29:39 -04:00 |
Meng Li
|
adb170c3fa
|
Fix step feature extraction input bug
|
2020-06-04 14:40:32 -04:00 |
JulioV
|
53db3fbaac
|
Fix bug so download_dataset receives the right fitbit table name
|
2020-06-01 18:54:19 -04:00 |
kaguillera
|
7f6448c431
|
Add Travis CI
|
2020-05-18 19:24:34 -04:00 |
Meng Li
|
34ffe4abaf
|
Add the rule to merge population model results
|
2020-05-15 18:49:14 -04:00 |
Meng Li
|
8df8a5c2b3
|
Add baseline
|
2020-05-15 18:45:45 -04:00 |
Meng Li
|
8c8378f74a
|
Split modeling module into two rules; Add RandomOverSampler for resampling; Add log; Fix bug of AUC
|
2020-05-15 18:42:03 -04:00 |
Meng Li
|
5fab99d8df
|
Add one rule to calculate the ratio of cells with missing values for cleaned features
|
2020-05-15 18:25:07 -04:00 |
Meng Li
|
6e99e69f8c
|
Save cleaned features with different data cleaning threasholds under different folders
|
2020-05-15 17:59:14 -04:00 |
Meng Li
|
915bdd04b1
|
Parse Fitbit summary and intraday data; Extract Fitbit daily features from summary data
|
2020-05-15 17:51:00 -04:00 |
JulioV
|
c30bf4d24f
|
Update renv.snakefile
|
2020-05-06 18:00:44 -04:00 |
JulioV
|
f0674122ff
|
Replace packrat with renv
|
2020-05-01 19:46:04 -04:00 |
Meng Li
|
7cbb227214
|
Add modeling module
|
2020-04-29 18:53:54 -04:00 |
Meng Li
|
9ddb50ed59
|
Split days threshold of data cleaning into days_before_surgery and days_after_discharge
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-29 14:37:40 -04:00 |
Meng Li
|
490599c742
|
Implement AR features for iOS
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-20 18:05:54 -04:00 |
Meng Li
|
5696b4f6d4
|
Add merge module for demographic features and target
|
2020-04-16 14:20:16 -04:00 |
Meng Li
|
eac721de84
|
Add demographic_features and targets module; refactor analysis code
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-16 12:38:28 -04:00 |
JulioV
|
010114c1aa
|
Add wifi features
|
2020-04-13 13:24:52 -04:00 |
Mingze Cao
|
8cc93c8791
|
Refactor battery feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 15:06:25 -05:00 |
Mingze Cao
|
2d7d3bfccf
|
Refactor location_barnett features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-09 12:20:39 -05:00 |
Mingze Cao
|
c2fbc3ad7a
|
Refactor sms feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 15:02:58 -05:00 |
Mingze Cao
|
97c83caebc
|
Refactor fitbit_heartrate feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 14:31:43 -05:00 |
Mingze Cao
|
a53ba242f8
|
Refactor google_activity_recognition feature: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:36:36 -05:00 |
Mingze Cao
|
0809001dfa
|
Refactor light features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 13:02:53 -05:00 |
Mingze Cao
|
f46e8c0666
|
Refactor applications_foreground features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 12:31:43 -05:00 |
Mingze Cao
|
d1c38016de
|
Refactor call features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:51:18 -05:00 |
Mingze Cao
|
e0d19cbc1b
|
Refactor screen features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-04-08 10:05:16 -05:00 |
Mingze Cao
|
3986f4e185
|
Refactor fitbit_step features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-03 16:03:45 -05:00 |
Mingze Cao
|
595bdd6f5b
|
Refactor bluetooth features: replace "metrics" with "features"
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-03 12:07:09 -05:00 |
Mingze Cao
|
6045df494d
|
Modify the Accelerometer ‘Metrics’ to Accelerometer ‘Features’
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-04-02 16:36:28 -05:00 |
Meng Li
|
ea46df63d5
|
Get targets
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-03-26 17:27:23 -04:00 |
JulioV
|
0e173872df
|
Refactor select_days_to_analyse, fix merge bugs, add clean metrics for model
|
2020-03-17 21:15:53 -04:00 |
Meng Li
|
7c240a9613
|
Select days to analyse
Co-authored-by: JulioV <juliovhz@gmail.com>
|
2020-03-17 17:26:30 -04:00 |
JulioV
|
3d4c26754e
|
Rename merge metrics for models and add filter valid sensed days
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
|
2020-03-12 17:31:46 -04:00 |
Meng Li
|
b23bb0e402
|
Add INCLUDE_ZERO_STEP_ROWS flag for step sensor
|
2020-03-09 15:59:51 -04:00 |
Meng Li
|
aba9f13332
|
Add merge metrics module for analysis rules
|
2020-03-09 13:32:14 -04:00 |
JulioV
|
12ceb87090
|
Merge branch 'master' of https://github.com/carissalow/rapids
|
2020-03-05 10:32:46 -05:00 |
JulioV
|
ccc283db16
|
Add day segment parameter to location barnett rule
|
2020-03-05 10:32:38 -05:00 |
Meng Li
|
c8b7275084
|
Add firstuseafterTIME feature for screen sensor
|
2020-03-04 12:21:36 -05:00 |
Meng Li
|
85f4ec2ab6
|
Delete screen event features and add countepisode and episodepersensedminutes
|
2020-03-03 17:31:15 -05:00 |
JulioV
|
c7bc430425
|
Add priority to download participants rule
|
2020-03-03 11:08:18 -05:00 |
JulioV
|
619a6e6e2b
|
Fix screen delta extraction for iOS and Android
|
2020-03-02 19:26:20 -05:00 |
Meng Li
|
fa9029b090
|
Add overall compliance heatmap for last 7 days
|
2020-02-25 13:27:17 -05:00 |
JulioV
|
f22d1834ee
|
Add metric filter to barnett location features
|
2020-02-21 10:58:35 -05:00 |
Meng Li
|
579df6325f
|
Add date filter for download_dataset
|
2020-02-20 15:51:22 -05:00 |
Meng Li
|
3369a97d0e
|
Add device_id and label to heatmaps
|
2020-02-20 10:16:03 -05:00 |
Meng Li
|
76888b412d
|
Add label and dates for external files
|
2020-02-18 16:41:10 -05:00 |
JulioV
|
6bbc916702
|
Add download_participants functionality
|
2020-02-10 16:45:34 -05:00 |
Meng Li
|
0840235280
|
Add applications_foreground features
|
2020-02-07 11:52:55 -05:00 |
Meng Li
|
770764ec8a
|
Add heartrate features
|
2020-02-07 11:35:15 -05:00 |
Meng Li
|
3d13940bd3
|
Fixed heatmap issue#27
|
2020-02-07 11:14:19 -05:00 |
Echhit Joshi
|
d82fa0d217
|
Add Fitbit steps feature extraction
|
2020-01-29 16:22:53 -05:00 |
JulioV
|
4aec2c4032
|
Combine all fitbit sensors in one script and one rule
|
2020-01-16 17:20:04 -05:00 |
JulioV
|
9d00f14f7f
|
Add category (genre) to foreground apps
|
2020-01-15 18:28:56 -05:00 |
Meng Li
|
34c4586e4d
|
Add fitbit raw data and datetime
|
2020-01-15 17:18:10 -05:00 |
Meng Li
|
ad514b5d40
|
Add accelerometer features
|
2020-01-15 14:15:24 -05:00 |
Meng Li
|
2b4e29ce6e
|
Add light features
|
2020-01-14 09:51:39 -05:00 |
JulioV
|
3fbc1b5b92
|
Add html compliance report
|
2019-12-18 15:23:42 -05:00 |
JulioV
|
c411f99cc6
|
Add clean rule and packrat snakemake file
|
2019-12-18 00:28:23 -05:00 |
JulioV
|
cb2ee1ec82
|
Add switch to barnet_locations.R to use all, all except fused or resample fused locations
|
2019-12-09 19:15:10 -05:00 |
JulioV
|
0ba88203f4
|
Add resampling for fused location
|
2019-12-09 18:23:00 -05:00 |
JulioV
|
6a79fbe1e8
|
Fix bug in iOS battery (different status compared to Android)
|
2019-12-05 16:24:05 -05:00 |
Meng Li
|
a4e39ad451
|
Add bin_size parameter for compliance_heatmap and screen_metrics
|
2019-12-05 11:07:40 -05:00 |
Meng Li
|
4390979143
|
Add unlocksperminute feature and remove countdiff for screen sensor
|
2019-12-04 16:04:37 -05:00 |