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86 Commits (dfc0d73d1508a72ad0805018a2a74ec12884ada3)

Author SHA1 Message Date
JulioV d2704296f3 Refactor valid sensed bins and days 2020-07-09 13:01:50 -04:00
JulioV b381672cae
Update config.yaml 2020-06-29 13:50:33 -04:00
Meng Li 62f862a738 Fix default for ACCELEROMETER VALID_SENSED_MINUTES 2020-06-26 17:35:29 -04:00
Meng Li 29b04b0601 Fix step bouts features 2020-06-26 17:33:30 -04:00
kaguillera 533d0adab3 Updated sms sensor to messages 2020-06-26 12:20:47 -04:00
nikunjgoel95 0c53fd275e Required changes in config 2020-06-24 17:03:14 -04:00
JulioV 8c647b3b4c
Fix default for STEP EXCLUDE_SLEEP 2020-06-24 13:40:15 -04:00
JulioV 1bdb52dd65 Add functionality to exlcude step data based on sleep 2020-06-24 13:33:58 -04:00
Meng Li 8aa25144f0 Refactor analysis part of snakefile 2020-06-23 20:46:42 -04:00
kaguillera 7bcf674793 Refactored testing after pipeline refactoring 2020-06-23 18:29:01 -04:00
JulioV 36017d5dca Refactor Snakefile and docs. Rename SMS scripts 2020-06-23 11:33:34 -04:00
Meng Li 4d1ff10701 Rename heartrate zone features 2020-06-22 14:15:56 -04:00
Meng Li 99fe86ac2a Rename accelerometer features names 2020-06-22 13:47:25 -04:00
Meng Li a121c0fe7b Split accelerometer features in config file; drop count; add more stats features 2020-06-22 12:01:17 -04:00
Meng Li f07ba22f98 Minor fix for applications_foreground sensor 2020-06-19 16:22:57 -04:00
nikunjgoel95 1409de2832 Added Converstion Features. 
Updated config.yaml, Snakefile, Features.Snakefile and documentation.
 2020-06-19 01:27:28 -04:00
Meng Li e133b8b530 Refactor fitbit sleep features 2020-06-12 18:44:05 -04:00
Meng Li dcc7ca14e3 Refactor fitbit heartrate features 2020-06-12 16:04:03 -04:00
JulioV 8fbafcbe0c Fix location bug and improve fused resampling 2020-06-11 12:25:49 -04:00
Meng Li aa1baaf948 Refactor activity recognition features 2020-06-04 19:32:28 -04:00
JulioV 5656c673d3 Remove varqn and huberm features from calls 2020-06-02 19:48:22 -04:00
Meng Li 8c8378f74a Split modeling module into two rules; Add RandomOverSampler for resampling; Add log; Fix bug of AUC 2020-05-15 18:42:03 -04:00
Meng Li 915bdd04b1 Parse Fitbit summary and intraday data; Extract Fitbit daily features from summary data 2020-05-15 17:51:00 -04:00
Meng Li 7cbb227214 Add modeling module 2020-04-29 18:53:54 -04:00
Meng Li 9ddb50ed59 Split days threshold of data cleaning into days_before_surgery and days_after_discharge 
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-04-29 14:37:40 -04:00
Meng Li 490599c742 Implement AR features for iOS 
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-04-20 18:05:54 -04:00
Meng Li 5696b4f6d4 Add merge module for demographic features and target 2020-04-16 14:20:16 -04:00
Meng Li eac721de84 Add demographic_features and targets module; refactor analysis code 
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-04-16 12:38:28 -04:00
Meng Li 695984586f Add calories module for fitbit_readable_datetime.py 2020-04-15 16:01:02 -04:00
JulioV 010114c1aa Add wifi features 2020-04-13 13:24:52 -04:00
Mingze Cao 8cc93c8791 Refactor battery feature: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-09 15:06:25 -05:00
Mingze Cao 2d7d3bfccf Refactor location_barnett features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-09 12:20:39 -05:00
Mingze Cao c2fbc3ad7a Refactor sms feature: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 15:02:58 -05:00
Mingze Cao 97c83caebc Refactor fitbit_heartrate feature: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 14:31:43 -05:00
Mingze Cao a53ba242f8 Refactor google_activity_recognition feature: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 13:36:36 -05:00
Mingze Cao 0809001dfa Refactor light features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 13:02:53 -05:00
Mingze Cao f46e8c0666 Refactor applications_foreground features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 12:31:43 -05:00
Mingze Cao d1c38016de Refactor call features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 10:51:18 -05:00
Mingze Cao e0d19cbc1b Refactor screen features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-08 10:05:16 -05:00
Mingze Cao 3986f4e185 Refactor fitbit_step features: replace "metrics" with "features" 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-04-03 16:03:45 -05:00
Mingze Cao 6045df494d Modify the Accelerometer ‘Metrics’ to Accelerometer ‘Features’ 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-04-02 16:36:28 -05:00
Mingze Cao 7d770c91f3 Add sumdurationsedentarybout of the fitbit_step sensor 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-04-02 13:36:54 -05:00
JulioV 0e173872df Refactor select_days_to_analyse, fix merge bugs, add clean metrics for model 2020-03-17 21:15:53 -04:00
Meng Li 7c240a9613 Select days to analyse 
Co-authored-by: JulioV <juliovhz@gmail.com>
 2020-03-17 17:26:30 -04:00
JulioV 3d4c26754e Rename merge metrics for models and add filter valid sensed days 
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
 2020-03-12 17:31:46 -04:00
Meng Li b23bb0e402 Add INCLUDE_ZERO_STEP_ROWS flag for step sensor 2020-03-09 15:59:51 -04:00
Meng Li aba9f13332 Add merge metrics module for analysis rules 2020-03-09 13:32:14 -04:00
JulioV 301bd0bf1d
Change default database group name 2020-03-09 12:55:43 -04:00
JulioV 12ceb87090 Merge branch 'master' of https://github.com/carissalow/rapids 2020-03-05 10:32:46 -05:00
JulioV ccc283db16 Add day segment parameter to location barnett rule 2020-03-05 10:32:38 -05:00