Primoz
5532043b1f
Patching IBI with BVP - completed.
2022-05-25 19:39:47 +00:00
Primoz
2a8f58f5c8
Patching IBI with BVP. WIP
2022-05-20 13:18:45 +00:00
Primoz
6864cfe775
Changes after thorough testing with available data.
2022-05-13 13:35:34 +00:00
Primoz
c1564f0cae
Changed wrapper method calculate_feature to its newest version (for TEMP and ACC).
2022-05-11 14:21:21 +00:00
Primoz
31e36e7400
Alternating Second order and full segment features corresponding to config settings.
2022-05-11 08:50:15 +00:00
Primoz
9cf9e1fe14
Testing and modifying the code with different E4 data.
2022-05-10 11:36:49 +00:00
Primoz
f62a1302dd
Cr-features corrections for ACC and TEMP sensors
2022-05-09 11:01:52 +00:00
Primoz
5638367999
Implementation of the second order features.
2022-04-25 13:07:03 +00:00
Primoz
66451160e9
Calculating HRV features with IBI.csv.
2022-04-20 10:44:51 +00:00
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8c8fe1fec7
Modifications, mostly imports, after changes in cr-features module.
2022-04-19 13:24:46 +00:00
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075c64d1e5
HRV: changed wrapper calcFeat method with specialized one.
2022-04-14 11:51:53 +00:00
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3c058e4463
Add option to calculate features within windows and store it in CSV (all sensors).
2022-04-13 13:18:23 +00:00
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74cf4ada1c
Cr-feat window length for all empaticas sensors.
2022-04-12 14:00:44 +00:00
Primoz
c050174ca3
Various minimal changes.
2022-03-31 09:16:00 +00:00
Primoz
a357138f6e
Added CF for HRV and shortened test data
2022-03-30 15:01:24 +00:00
Primoz
470993eeb0
Modification of getSampleRate method for all CF scripts.
2022-03-30 15:00:11 +00:00
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ab0b9227d7
Added ACC calculated features and shorter version of ACC data.
2022-03-29 09:41:51 +00:00
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a9244a60fc
Corrections for TEMP cf src script.
2022-03-28 14:26:37 +00:00
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8b76c96e47
Cleaning existing CF mains' and preparing src script for ACC.
2022-03-28 14:18:29 +00:00
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ca59a54d8f
Get a sample rate from two sequential timestamps.
2022-03-28 13:50:08 +00:00
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393dab72f5
Added components for the temperature features extraction.
2022-03-28 12:37:02 +00:00
Primoz
f389ac9d89
Delete CF features folder
2022-03-25 16:24:52 +00:00
Primoz
191e53e543
Added cf provider for EDA feature processing.
2022-03-23 15:13:53 +00:00
Primoz
2da0911d4c
Skeleton file main.py for EDA CalcFt. integration.
2022-03-22 12:48:43 +00:00
Meng Li
5bad3eb8b5
Data cleaning ( #166 )
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* Refactor data cleaning module: move it from example workflow to main directory
* Replace NAs with 0 in selected event-based features
* Add one step to drop highly correlated features
Co-authored-by: Weiyu <weiyuhuang7@gmail.com>
2021-11-19 10:34:36 -05:00
Meng Li
296960f425
Fix the bug of location doryab features when a participant is moving during the whole time segment
2021-11-18 18:42:19 -05:00
Meng Li
3d34036eae
Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider ( #168 )
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* Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider
* Update test config files
2021-11-18 18:35:27 -05:00
Meng Li
f340b89c58
Temporary revert PHONE_LOCATIONS BARNETT provider to use R script
2021-09-23 18:16:13 -04:00
Meng Li
a3fb718aea
Refactor PHONE_LOCATIONS DORYAB provider to compute features based on location episodes
2021-09-23 17:40:06 -04:00
Meng Li
a8a178486b
Refactor PHONE_CALLS RAPIDS provider to compute features based on call episodes or events
2021-09-15 10:28:37 -04:00
JulioV
2e553dc9e7
Add tqdm package to environment.yaml
2021-08-16 11:04:03 -04:00
Meng Li
3ac12e7dad
Fix the bug of step intraday features when INCLUDE_ZERO_STEP_ROWS is False
2021-08-11 12:40:40 -04:00
Weiyu
35eebe8a51
Bug fixed: set ratiovalidyielded mins/hours value to the range 0 to 1
2021-08-09 17:56:29 -04:00
JulioV
3e69966c91
Update error message
2021-08-04 15:33:02 -04:00
Shirley
4ddb2845a6
Update initialize_params
2021-08-04 15:33:02 -04:00
JulioV
834bd3b93d
Refactor in Python of Barnett provider
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Co-authored-by: Shirley Hayati <sahayati@ucdavis.edu>
Co-authored-by: JulioV <JulioV@users.noreply.github.com>
2021-08-04 15:33:02 -04:00
Weiyu
7f1c502ea0
Fixed bug: Added local_segment column if no data left after filtered
2021-08-04 11:06:31 -04:00
Hannah Roberts
b52059b027
Ensure date/time format is maintained
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Within the 'determine which is home' for loop, 'xx' is the midpoint of two datetime objects. When the midpoint is calculated to be midnight, only the date is returned. This can be replicated with:
mydates <- as.POSIXct("2018-01-01 00:00:00", tz = "UTC")
mydates
[1] "2018-01-01 UTC"
This results in 'hourofday' being NA as an hour cannot be found. By adding the suggested format wrapper, the time is maintained and 'hourofday' can be determined. It can then successfully be applied to the embedded if-statement within the loop.
mydates <- format(as.POSIXct("2018-01-01 00:00:00", tz = "UTC"), "%Y-%m-%d %H:%M:%S")
mydates
[1] "01-01-2018 00:00:00"
2021-07-23 10:12:11 -04:00
Weiyu
5a465873c4
Tested fitbit heartrate intraday feature
2021-07-21 10:24:02 -04:00
JulioV
6fa1875bf3
Add app foreground episode count
2021-07-01 16:20:16 -04:00
JulioV
bc5c0c9a4f
Fix app episode length bug
2021-07-01 16:20:16 -04:00
JulioV
065a926a87
Change own to custom categories name
2021-07-01 16:20:16 -04:00
JulioV
e74c745f86
Add own categories to app foreground features
2021-07-01 16:20:16 -04:00
Meng Li
1c57320ab3
Update segment labels and fix the bug when we do not have any labels for event segments
2021-06-29 09:49:24 -04:00
Weiyu
3e4d167adc
Bug fixed: sort bt_address alphabetically before picking the most frequent bt_address
2021-06-22 17:40:00 -04:00
kirtirajk
4b8698a4c6
adding app_episode with the changes as mentioned in the comments
2021-06-10 14:17:56 -04:00
Weiyu
65d5cb7bd4
Bug fixed: countscansmostuniquedevice stays the same for all time segments
2021-06-10 10:49:22 -04:00
Meng Li
9687081fbe
Refactor the rule phone_locations_add_doryab_extra_columns
2021-05-28 09:48:36 -04:00
Meng Li
0d6f51be8b
Refactor location features from Doryab provider & add a new strategy to infer home location & fix bugs
2021-05-26 17:36:52 -04:00
Nikunj Goel
9b21196f35
Fixed `expected_minutes` to account for different time segments. ( #136 )
2021-05-26 11:44:48 -04:00