Commit Graph

89 Commits (681a77f23c9264100577b97864d54ef2e4168414)

Author SHA1 Message Date
JulioV e643881058 Migrate light to new file structure 2020-09-01 12:01:24 -04:00
JulioV eda58d9d2c Migrate wifi to new file structure 2020-08-31 18:51:06 -04:00
JulioV 77d9d8f025 Migrate bluetooth to new file structure 2020-08-31 17:08:26 -04:00
JulioV 132311da77 Migrate messages to new file structure 2020-08-31 13:34:15 -04:00
JulioV e269062439 Migrate calls to new provider file structure 2020-08-28 17:50:49 -04:00
JulioV b0f1477d7e Migrate location providers to new file structure and segments 2020-08-28 13:53:00 -04:00
JulioV 14d2d694ce Migrate messages to new segments 2020-08-26 13:01:58 -04:00
JulioV 31ec5b0da4 Finalise new day segment structure with calls as example 2020-08-26 12:09:53 -04:00
kaguillera 7f5039c17f Minor Travis fix pt2 2020-08-14 13:31:47 -04:00
kaguillera d639e74322 Minor Travis fix 2020-08-14 13:16:55 -04:00
JulioV 162ffd019c Fix error related to external participant file for testing 2020-08-11 18:59:52 -04:00
JulioV b83f8ead44 Refactor snakefiles to smk files and create common.smk 2020-08-11 18:45:50 -04:00
JulioV 3f48a47a14 Fix optional input files for phone sensed bins 2020-08-11 18:02:52 -04:00
JulioV 08ce250839 Unify conversation timestamp for ios 2020-08-11 16:18:06 -04:00
Meng Li 973e1669fa Move baselines into a folder; rename column of "num_of_participants" with "num_of_rows" in modeling.py 2020-08-05 07:51:35 -04:00
Meng Li 21c3251066 Delete mystudy.snakefile and add all rules to models.snakefile 2020-07-29 15:25:26 -04:00
Meng Li c498b8d2df Add hours and bins thresholds for analysis section 2020-07-27 22:59:32 -04:00
Meng Li 93157db210 Data cleaning section: replace "day_type" with "day_idx" 2020-07-27 18:27:36 -04:00
Meng Li af6678c70c Update visualization section: add MIN_VALID_BINS_PER_HOUR 2020-07-26 20:11:25 -04:00
JulioV 388f09a003 Add missing wifi table 2020-07-24 16:35:41 -04:00
Meng Li b3aa4d82e1 Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously) 2020-07-24 12:58:48 -04:00
Meng Li c135b6ef78 Add visualization for data exploration 2020-07-22 16:47:32 -04:00
Meng Li 124843f96e Make phone_valid_sensed_days rule works for different min_valid_hours_per_day thresholds 2020-07-21 20:41:24 -04:00
JulioV edd46f5d17 Update environment for new location features 2020-07-21 15:33:28 -04:00
nikunjgoel95 024ae1a549 Added Doryab's location features to rapids.
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-07-16 14:26:43 -04:00
JulioV 968c5dd5e2 Fix bug in Snakefie barnett location 2020-07-10 17:06:37 -04:00
JulioV 0049c1ca87 Minor fix for consistency 2020-07-09 14:52:49 -04:00
JulioV d2704296f3 Refactor valid sensed bins and days 2020-07-09 13:01:50 -04:00
JulioV 06edf53016 Add support for multi-platform participants 2020-06-30 17:34:18 -04:00
JulioV 1bdb52dd65 Add functionality to exlcude step data based on sleep 2020-06-24 13:33:58 -04:00
Meng Li 8aa25144f0 Refactor analysis part of snakefile 2020-06-23 20:46:42 -04:00
JulioV 36017d5dca Refactor Snakefile and docs. Rename SMS scripts 2020-06-23 11:33:34 -04:00
nikunjgoel95 1409de2832 Added Converstion Features.
Updated config.yaml, Snakefile, Features.Snakefile and documentation.
2020-06-19 01:27:28 -04:00
Meng Li 34ffe4abaf Add the rule to merge population model results 2020-05-15 18:49:14 -04:00
Meng Li 8df8a5c2b3 Add baseline 2020-05-15 18:45:45 -04:00
Meng Li 8c8378f74a Split modeling module into two rules; Add RandomOverSampler for resampling; Add log; Fix bug of AUC 2020-05-15 18:42:03 -04:00
Meng Li 5fab99d8df Add one rule to calculate the ratio of cells with missing values for cleaned features 2020-05-15 18:25:07 -04:00
Meng Li 12302a9486 Change path of cleaned features in Snakefile 2020-05-15 18:10:36 -04:00
Meng Li 915bdd04b1 Parse Fitbit summary and intraday data; Extract Fitbit daily features from summary data 2020-05-15 17:51:00 -04:00
JulioV f0674122ff Replace packrat with renv 2020-05-01 19:46:04 -04:00
Meng Li 7cbb227214 Add modeling module 2020-04-29 18:53:54 -04:00
Meng Li 490599c742 Implement AR features for iOS
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-04-20 18:05:54 -04:00
Meng Li 77d41639d8 Fix bug of params in Snakefile for days_to_analyse 2020-04-16 14:42:44 -04:00
Meng Li 5696b4f6d4 Add merge module for demographic features and target 2020-04-16 14:20:16 -04:00
Meng Li eac721de84 Add demographic_features and targets module; refactor analysis code
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-04-16 12:38:28 -04:00
JulioV 010114c1aa Add wifi features 2020-04-13 13:24:52 -04:00
Meng Li ea46df63d5 Get targets
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-03-26 17:27:23 -04:00
JulioV 0e173872df Refactor select_days_to_analyse, fix merge bugs, add clean metrics for model 2020-03-17 21:15:53 -04:00
Meng Li 7c240a9613 Select days to analyse
Co-authored-by: JulioV <juliovhz@gmail.com>
2020-03-17 17:26:30 -04:00
JulioV 3d4c26754e Rename merge metrics for models and add filter valid sensed days
Co-authored-by: Meng Li <AnnieLM1996@gmail.com>
2020-03-12 17:31:46 -04:00