16e608db74
First merge baseline datasets.
2022-02-04 18:21:42 +01:00
204f6f50b0
Read the relevant files.
2022-02-04 18:06:02 +01:00
685ed6a546
Set up demographic data download.
2022-02-04 17:37:00 +01:00
1efb8e3112
Clean features across participants.
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Explore the best linear regression feature.
2022-01-19 13:41:09 +01:00
2fb068cb8b
Do not calculate accelerometer features.
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Add data cleaning.
2022-01-07 12:20:51 +01:00
5a9252e46e
Merge remote-tracking branch 'origin/master'
2021-12-15 18:32:36 +01:00
e5cc02501f
Set the timezone.csv path in config.
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Take into account that TZCODES_FILE can be created with a rule.
2021-12-15 18:09:30 +01:00
15653b6e70
Add forgotten line for hashed app names in config.
2021-12-15 17:26:54 +01:00
4485c4c95e
Delete columns we don't have.
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Rename light table.
Correct timesegments.
2021-12-08 20:02:47 +01:00
633384c6a9
Use all available sensors for PHONE_YIELD.
2021-12-08 19:04:19 +01:00
8e2222f307
Bring back deleted lines which are required.
2021-12-08 18:59:10 +01:00
712ff74898
Set table names and calculate all relevant features.
2021-12-08 18:37:34 +01:00
1f54195437
Configure timezone file to be created automatically.
2021-12-08 18:21:29 +01:00
2b52f686b3
Define daily segments.
2021-12-08 18:20:22 +01:00
f0d29d0d1a
Incorporate DB query for usernames into snakemake workflow.
2021-12-01 18:14:27 +01:00
da5ff0f36e
Correct small errors in settings.
2021-11-29 18:04:06 +01:00
39bd244511
[WIP] Prepare yaml files.
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These will be used to create participants files.
2021-11-24 19:11:19 +01:00
5bad3eb8b5
Data cleaning ( #166 )
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* Refactor data cleaning module: move it from example workflow to main directory
* Replace NAs with 0 in selected event-based features
* Add one step to drop highly correlated features
Co-authored-by: Weiyu <weiyuhuang7@gmail.com>
2021-11-19 10:34:36 -05:00
3d34036eae
Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider ( #168 )
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* Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider
* Update test config files
2021-11-18 18:35:27 -05:00
4829b155d5
Make config changes for minimal workflow.
2021-11-17 18:53:44 +01:00
7f4683e0fe
Feature/screen default maxlength ( #164 )
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Updated the default IGNORE_EPISODES_LONGER_THAN to be 6 hours for screen RAPIDS provider
2021-10-14 09:26:06 -04:00
a3fb718aea
Refactor PHONE_LOCATIONS DORYAB provider to compute features based on location episodes
2021-09-23 17:40:06 -04:00
a8a178486b
Refactor PHONE_CALLS RAPIDS provider to compute features based on call episodes or events
2021-09-15 10:28:37 -04:00
e1cfcd46e4
Update example workflow for app episode features
2021-07-01 18:08:33 -04:00
065a926a87
Change own to custom categories name
2021-07-01 16:20:16 -04:00
e74c745f86
Add own categories to app foreground features
2021-07-01 16:20:16 -04:00
4b8698a4c6
adding app_episode with the changes as mentioned in the comments
2021-06-10 14:17:56 -04:00
0d6f51be8b
Refactor location features from Doryab provider & add a new strategy to infer home location & fix bugs
2021-05-26 17:36:52 -04:00
edf71e055d
Add the EXCLUDE_SLEEP module for steps intraday features
2021-05-21 15:23:21 -04:00
5e451f99b0
Added phone keyboard features including docs/tests ( #134 )
2021-05-21 11:45:27 -04:00
809845143f
Test & fix bugs of sleep intraday features
2021-04-27 14:40:14 -04:00
66d9a9d640
Update params & docs of sleep features
2021-04-27 14:33:19 -04:00
1fa9481933
Rlease v1.1.0
2021-04-20 15:14:29 -04:00
9c56422529
Add calories intraday features
2021-04-20 12:00:38 -04:00
636b64c61a
Revert "Added more keyboard features."
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This reverts commit 94c72e3172
2021-04-05 11:25:00 -04:00
94c72e3172
Added more keyboard features.
2021-04-01 20:54:13 -04:00
e177aa6386
Update create participant files section
2021-03-25 11:39:31 -04:00
a5eb535126
Update visualizations docs & add time flag for heatmap of overall data yield
2021-03-23 21:40:55 -04:00
c7e834d654
Update default value for DBSCAN_EPS
2021-03-19 12:04:12 -04:00
4528ab3641
Replace SRC LANGUAGE and FOLDER with SCRIPT
2021-03-14 22:14:13 -04:00
42cee67664
Add aware_influxdb in beta
2021-03-14 13:33:43 -04:00
3ee8199574
Update docs
2021-03-14 11:42:29 -04:00
fae0c2ac05
Swap TABLE for CONTAINER
2021-03-12 18:14:49 -05:00
8e9a3bf4c5
Update location accuracy default
2021-03-12 17:18:08 -05:00
6e898beca5
Add aware_csv
2021-03-11 19:32:11 -05:00
1b8453bec4
Remove unused params from config.yaml
2021-03-11 14:57:34 -05:00
13174b0c2a
Fix a bug when fitbit data is empty
2021-03-11 14:51:16 -05:00
2ee45995f2
Update config docs and create participant files script
2021-03-11 14:40:33 -05:00
a79997e0ac
Add empatica_zip docs
2021-03-11 14:39:26 -05:00
d48194fc07
Add fitbitparsed_csv
2021-03-11 14:39:26 -05:00
junos
Meng Li
JulioV
kirtirajk
Nikunj Goel