JulioV
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72f6b2d621
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Add steps intraday to fitbitjson_mysql
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2021-03-11 14:37:22 -05:00 |
Meng Li
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4825962361
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Migrate phone screen sensor to new data stream
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2021-03-11 14:35:34 -05:00 |
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Meng Li
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c1682d8cd3
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Migrate phone calls sensor to new data stream
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2021-03-11 14:35:34 -05:00 |
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JulioV
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6970954358
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Change MUTATION structure
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2021-03-11 14:35:34 -05:00 |
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JulioV
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1063b4ca65
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Add steps summary to fitbitjson_mysql
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2021-03-11 14:35:34 -05:00 |
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JulioV
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8c79cfc56f
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Fix OS specific dependcies
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2021-03-11 14:35:34 -05:00 |
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JulioV
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41711fcdb7
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Rename download_data add support for py containers
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2021-03-11 14:35:34 -05:00 |
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JulioV
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f65e3c8b1a
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Migrate empatica sensors to new data stream
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2021-03-11 14:35:34 -05:00 |
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JulioV
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fb054b539f
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Add support for multiple time zones
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2021-03-11 14:35:34 -05:00 |
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JulioV
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6c51c6c239
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Move phone_conversation to aware_mysql stream
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2021-03-11 14:35:34 -05:00 |
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JulioV
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ab1a3dbf79
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Move phone_activity_recognition to aware_mysql stream
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2021-03-11 14:35:34 -05:00 |
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JulioV
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dc11cb593d
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Add support for smartphone sources and schemas.
Initial support for accelerometer
Update docs for automatically create participants
Update docs for initial multiple time zones
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2021-03-11 14:35:33 -05:00 |
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Meng Li
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8377c12efb
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Add sleep intraday features with RAPIDS provider
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2021-02-26 17:47:01 -05:00 |
nikunjgoel95
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3d6caea6c4
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Added the timeathome feature using infer_home_location.py as interim file.
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2021-02-24 16:57:25 -05:00 |
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JulioV
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2e46f56111
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Empatica zips must be placed in pid folder and small fixes
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2021-02-21 17:32:41 -05:00 |
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JulioV
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4b9857562b
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Add support for zip input files
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2021-02-21 17:32:41 -05:00 |
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JulioV
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8c726f5d4f
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Start empatica support
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2021-02-21 17:32:41 -05:00 |
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Meng Li
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b67f990816
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Add new `FITBIT_DATA_YIELD` `RAPIDS` provider
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2021-02-02 18:30:21 -05:00 |
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JulioV
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4c1e311135
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Add error msg for invalid phone data yield sensors
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2021-01-14 14:31:40 -05:00 |
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JulioV
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585bf7bc5d
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Add code so new feature providers can be added for the new four sensors
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2021-01-14 14:31:40 -05:00 |
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JulioV
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8fd1d9dc29
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Add four new sensors without providers
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2021-01-14 14:31:40 -05:00 |
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JulioV
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51c7739bfc
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Revert "Start support for phone_keyboard"
This reverts commit dd95b4f941.
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2020-12-20 16:29:40 -05:00 |
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JulioV
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41f19ed781
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Merge branch 'hotfix/v0.2.3' into develop
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2020-12-18 11:27:39 -05:00 |
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JulioV
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1b65f11b89
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Fix participant IDS in the example analysis workflow
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2020-12-18 11:27:04 -05:00 |
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JulioV
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dd95b4f941
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Start support for phone_keyboard
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2020-12-14 13:42:22 -05:00 |
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Meng Li
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58ed986a61
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Update PIDS in example_config.yaml
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2020-12-04 18:45:16 -05:00 |
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Meng Li
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9a0e57301b
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Update 4 plots for time_segments
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2020-12-03 21:00:32 -05:00 |
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JulioV
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88743b9a14
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Update rule to create analysis workflow participant files
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2020-12-03 12:48:32 -05:00 |
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JulioV
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614e759551
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Refactor day segments to time segments
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2020-12-02 18:41:03 -05:00 |
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Meng Li
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0bd43c139c
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Update plot#1: histogram_phone_data_yield
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2020-12-01 14:21:33 -05:00 |
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Meng Li
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70991d6667
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Add dates filter while parsing fitbit data
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2020-11-30 12:34:14 -05:00 |
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Meng Li
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5178be585d
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Rename modeling.py to modelling.py & Update example_config.yaml
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2020-11-25 22:35:38 -05:00 |
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JulioV
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5f51c94ac6
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Separate device data configuration and update docs
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2020-11-25 19:42:11 -05:00 |
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Meng Li
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b4a512faf3
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Add analysis example workflow
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2020-11-25 16:34:05 -05:00 |
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JulioV
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ced3305ddb
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Update R feature scripts to add sensor and provider names automatically
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2020-11-25 14:49:42 -05:00 |
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JulioV
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f02ca2624d
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Add phone yield sensor
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2020-11-24 19:12:16 -05:00 |
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Meng Li
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deba6b9e4f
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Update sleep summary features for segments
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2020-11-23 12:01:00 -05:00 |
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Meng Li
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a71efd6b85
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Split FITBIT_STEPS into FITBIT_STEPS_SUMMARY and FITBIT_STEPS_INTRADAY
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2020-11-11 21:16:48 -05:00 |
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Meng Li
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b7e22b7440
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Fix fitbit_parse_heartrate rule's table parameter
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2020-11-11 20:23:41 -05:00 |
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Meng Li
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9fc36f67e2
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Split FITBIT_HEARTRATE into FITBIT_HEARTRATE_SUMMARY and FITBIT_HEARTRATE_INTRADAY
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2020-11-11 17:27:46 -05:00 |
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JulioV
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6ac4c05772
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Merge branch 'day_segments' of https://github.com/carissalow/rapids into day_segments
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2020-11-06 17:18:02 -05:00 |
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JulioV
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2aa44fc504
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Change SENSOR_DATA to DEVICE_DATA
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2020-11-04 17:16:46 -05:00 |
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Meng Li
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82873c285d
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Make sure feature rules of all sensors support both Python and R scripts
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2020-11-04 14:05:25 -05:00 |
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Meng Li
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39632c66f5
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Update steps features for segments
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2020-10-30 18:57:04 -04:00 |
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Meng Li
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ed7585c2bf
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Update heartrate features for segments
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2020-10-27 17:55:57 -04:00 |
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JulioV
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d5931c75d8
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Refactor script to create participants files
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2020-10-27 17:13:16 -04:00 |
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Meng Li
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c8176b2d90
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Fix MissingInputException issue of download_fitbit_data rule
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2020-10-27 14:59:47 -04:00 |
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Meng Li
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2601ccde87
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Fix minor bug of download_fitbit_data rule
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2020-10-27 13:40:10 -04:00 |
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JulioV
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b986599226
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Add support to read fitbit data from csv files
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2020-10-26 17:17:53 -04:00 |
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JulioV
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234588c94d
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Expose episode threshold between rows parameter
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2020-10-26 15:28:19 -04:00 |
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JulioV
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1d04aa6807
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Add check for non-overlapping event day segments
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2020-10-23 12:15:26 -04:00 |
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JulioV
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47adb8bc4b
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Add tz support to fitbit
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2020-10-22 14:38:40 -04:00 |
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JulioV
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cff83a7ceb
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Implement parse fitbit data
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2020-10-22 13:08:52 -04:00 |
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JulioV
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c266f6dd10
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Update participant files structure and fitbit download rule
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2020-10-20 19:12:01 -04:00 |
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JulioV
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24bf62a7ab
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Update file names
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2020-10-19 15:07:12 -04:00 |
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Meng Li
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29dcd1f284
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Add accelerometer features of RAPIDS provider
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2020-10-13 11:42:36 -04:00 |
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Meng Li
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236b1cd809
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Update AR module for segments; Refactor input format
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2020-10-07 18:11:06 -04:00 |
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JulioV
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6b1e006b82
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Refactor fused location resampling
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2020-10-07 11:51:31 -04:00 |
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Meng Li
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f1717e59e7
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Update screen&battery episodes features with different segment format
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2020-09-29 17:13:34 -04:00 |
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JulioV
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0dafdd1340
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Redo resample episodes in R, new battery episodes
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2020-09-29 15:18:48 -04:00 |
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JulioV
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303d1472ed
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Change how we compute AR episodes
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2020-09-22 17:32:51 -04:00 |
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JulioV
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a851a460e4
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Change the way we compute battery episodes
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2020-09-22 16:53:51 -04:00 |
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Meng Li
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f806cb44ac
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Fix the bug of screen duration features for different segments
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2020-09-18 20:25:29 -04:00 |
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JulioV
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4dc8d38c66
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Optimise assign to day segment
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2020-09-16 14:54:20 -04:00 |
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JulioV
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3c45f6b152
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Refactor assign to day segment
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2020-09-14 14:21:36 -04:00 |
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JulioV
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98ebf9bd13
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Migrate conversation to new file structure
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2020-09-01 17:07:07 -04:00 |
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JulioV
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8d87f6e497
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Migrate app foreground to new file structure
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2020-09-01 15:25:35 -04:00 |
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JulioV
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e643881058
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Migrate light to new file structure
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2020-09-01 12:01:24 -04:00 |
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JulioV
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eda58d9d2c
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Migrate wifi to new file structure
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2020-08-31 18:51:06 -04:00 |
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JulioV
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77d9d8f025
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Migrate bluetooth to new file structure
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2020-08-31 17:08:26 -04:00 |
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JulioV
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132311da77
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Migrate messages to new file structure
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2020-08-31 13:34:15 -04:00 |
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JulioV
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e269062439
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Migrate calls to new provider file structure
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2020-08-28 17:50:49 -04:00 |
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JulioV
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011b9736d5
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Refactor the function to fetch provider features
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2020-08-28 17:40:23 -04:00 |
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JulioV
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b0f1477d7e
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Migrate location providers to new file structure and segments
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2020-08-28 13:53:00 -04:00 |
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JulioV
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14d2d694ce
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Migrate messages to new segments
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2020-08-26 13:01:58 -04:00 |
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JulioV
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31ec5b0da4
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Finalise new day segment structure with calls as example
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2020-08-26 12:09:53 -04:00 |
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JulioV
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026d056378
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Simplify window workflow
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2020-08-20 14:51:22 -04:00 |
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JulioV
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a0b5b5982b
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Setup rules and files to support multiple
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2020-08-20 14:45:09 -04:00 |
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Meng Li
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00385dc54d
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Discard useless parameters and related code of example
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2020-08-17 10:48:15 -04:00 |
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JulioV
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b83f8ead44
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Refactor snakefiles to smk files and create common.smk
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2020-08-11 18:45:50 -04:00 |
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JulioV
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3f48a47a14
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Fix optional input files for phone sensed bins
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2020-08-11 18:02:52 -04:00 |
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JulioV
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08ce250839
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Unify conversation timestamp for ios
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2020-08-11 16:18:06 -04:00 |
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nikunjgoel95
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df7a52cd6c
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Added Sampling Frequency to Doryab Location Features.
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2020-08-05 13:02:34 -04:00 |
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Meng Li
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973e1669fa
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Move baselines into a folder; rename column of "num_of_participants" with "num_of_rows" in modeling.py
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2020-08-05 07:51:35 -04:00 |
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Meng Li
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0b65cc0546
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Add example_profile
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2020-08-03 17:30:15 -04:00 |
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Meng Li
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c2b25a146d
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Replace sensor name with table name in heatmap_days_by_sensors section
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2020-08-03 15:19:45 -04:00 |
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Meng Li
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e13b89b125
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Add restore_sql_file rule; notsummarised module; diff platforms for heatmap_days_by_sensors
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2020-08-03 13:09:16 -04:00 |
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Meng Li
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21c3251066
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Delete mystudy.snakefile and add all rules to models.snakefile
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2020-07-29 15:25:26 -04:00 |
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Meng Li
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c498b8d2df
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Add hours and bins thresholds for analysis section
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2020-07-27 22:59:32 -04:00 |
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Meng Li
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93157db210
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Data cleaning section: replace "day_type" with "day_idx"
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2020-07-27 18:27:36 -04:00 |
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Meng Li
|
af6678c70c
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Update visualization section: add MIN_VALID_BINS_PER_HOUR
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2020-07-26 20:11:25 -04:00 |
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JulioV
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388f09a003
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Add missing wifi table
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2020-07-24 16:35:41 -04:00 |
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Meng Li
|
b3aa4d82e1
|
Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously)
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2020-07-24 12:58:48 -04:00 |
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JulioV
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5f771618ae
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Add screen episode filter parameters
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2020-07-23 14:38:59 -04:00 |
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nikunjgoel95
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faad8f5a8f
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Added minutes of data in a day/epoch.
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2020-07-23 14:23:32 -04:00 |
|
Meng Li
|
b0354393ae
|
Add "corr_method" param to heatmap_features_correlations.py
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2020-07-22 20:00:14 -04:00 |
|
Meng Li
|
c135b6ef78
|
Add visualization for data exploration
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2020-07-22 16:47:32 -04:00 |
|
Meng Li
|
124843f96e
|
Make phone_valid_sensed_days rule works for different min_valid_hours_per_day thresholds
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2020-07-21 20:41:24 -04:00 |
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nikunjgoel95
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0ada1292ed
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Added maximum_gap_allowed parameter
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2020-07-21 18:56:43 -04:00 |
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nikunjgoel95
|
024ae1a549
|
Added Doryab's location features to rapids.
Co-authored-by: JulioV <juliovhz@gmail.com>
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2020-07-16 14:26:43 -04:00 |