834bd3b93d
Refactor in Python of Barnett provider
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Co-authored-by: Shirley Hayati <sahayati@ucdavis.edu>
Co-authored-by: JulioV <JulioV@users.noreply.github.com>
2021-08-04 15:33:02 -04:00
7f1c502ea0
Fixed bug: Added local_segment column if no data left after filtered
2021-08-04 11:06:31 -04:00
b52059b027
Ensure date/time format is maintained
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Within the 'determine which is home' for loop, 'xx' is the midpoint of two datetime objects. When the midpoint is calculated to be midnight, only the date is returned. This can be replicated with:
mydates <- as.POSIXct("2018-01-01 00:00:00", tz = "UTC")
mydates
[1] "2018-01-01 UTC"
This results in 'hourofday' being NA as an hour cannot be found. By adding the suggested format wrapper, the time is maintained and 'hourofday' can be determined. It can then successfully be applied to the embedded if-statement within the loop.
mydates <- format(as.POSIXct("2018-01-01 00:00:00", tz = "UTC"), "%Y-%m-%d %H:%M:%S")
mydates
[1] "01-01-2018 00:00:00"
2021-07-23 10:12:11 -04:00
5a465873c4
Tested fitbit heartrate intraday feature
2021-07-21 10:24:02 -04:00
6fa1875bf3
Add app foreground episode count
2021-07-01 16:20:16 -04:00
bc5c0c9a4f
Fix app episode length bug
2021-07-01 16:20:16 -04:00
065a926a87
Change own to custom categories name
2021-07-01 16:20:16 -04:00
e74c745f86
Add own categories to app foreground features
2021-07-01 16:20:16 -04:00
5892b6d838
Fix create_participants_files.R to handle numeric PIDs
2021-07-01 16:20:16 -04:00
97ef8a8368
Set color range and avoid SettingWithCopyWarning
2021-06-29 09:50:19 -04:00
1c57320ab3
Update segment labels and fix the bug when we do not have any labels for event segments
2021-06-29 09:49:24 -04:00
cefcb0635b
Update heatmap of recorded phone sensors
2021-06-29 09:49:24 -04:00
bc06477d89
Update heatmap of sensor row count
2021-06-29 09:49:24 -04:00
e98a8ff7ca
Update histogram of phone data yield
2021-06-29 09:49:24 -04:00
f436f1f530
Update heatmap of correlation matrix
2021-06-29 09:49:23 -04:00
4d37696158
Update heatmaps of overall data yield
2021-06-29 09:48:30 -04:00
f374c67bd5
Bug fixed: Added unknown activity case
2021-06-23 19:04:55 -04:00
3e4d167adc
Bug fixed: sort bt_address alphabetically before picking the most frequent bt_address
2021-06-22 17:40:00 -04:00
f248b6c97d
Fix bugs of Fitbit mutation scripts
2021-06-11 18:18:33 -04:00
4b8698a4c6
adding app_episode with the changes as mentioned in the comments
2021-06-10 14:17:56 -04:00
65d5cb7bd4
Bug fixed: countscansmostuniquedevice stays the same for all time segments
2021-06-10 10:49:22 -04:00
e123a14082
Improve aware_csv msg when CSV files don't exist
2021-06-01 10:57:17 -04:00
9687081fbe
Refactor the rule phone_locations_add_doryab_extra_columns
2021-05-28 09:48:36 -04:00
0d6f51be8b
Refactor location features from Doryab provider & add a new strategy to infer home location & fix bugs
2021-05-26 17:36:52 -04:00
32472461ec
- Fix bug when no phone data yield is needed to process location data
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- Remove location rows with the same timestamp based on their accuracy
2021-05-26 14:04:29 -04:00
9b21196f35
Fixed `expected_minutes` to account for different time segments. ( #136 )
2021-05-26 11:44:48 -04:00
edf71e055d
Add the EXCLUDE_SLEEP module for steps intraday features
2021-05-21 15:23:21 -04:00
5e451f99b0
Added phone keyboard features including docs/tests ( #134 )
2021-05-21 11:45:27 -04:00
e9cd9c94d7
Fix PID matching when joining data from participants
2021-05-11 16:49:04 -04:00
32818a4802
Fix parse of pids with more than 1 devices
2021-05-11 16:42:20 -04:00
809845143f
Test & fix bugs of sleep intraday features
2021-04-27 14:40:14 -04:00
7c7f34ec45
Test & fix bugs of sleep summary features
2021-04-27 14:40:14 -04:00
50fe09cfac
Update data streams mutation of fitbit data
2021-04-27 14:40:14 -04:00
66d9a9d640
Update params & docs of sleep features
2021-04-27 14:33:19 -04:00
4beafd233d
Fix crash when scraping data for an app that does not exist
2021-04-22 14:28:52 -04:00
ea8094e028
Fix length of periodic segments on days with DLS
2021-04-22 11:32:10 -04:00
9c56422529
Add calories intraday features
2021-04-20 12:00:38 -04:00
00a3335623
Add device_id column for sleep intraday episodes
2021-04-08 11:21:28 -04:00
286d317af4
Fix crash when there are no periodic segments to assign
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This includes a simplification of how periodic segments are computed based on all local dates in the data independently of their time zones
2021-04-07 12:03:25 -04:00
9551669d47
Fix periodic segments bug when there are no segments to assign
2021-04-06 20:29:30 -04:00
78173c54ab
Convert date time object to string in assign_tz_code() function
2021-04-06 23:28:53 +00:00
1025e6d9d8
Fix datetime labels of event segments across multiple tzs
2021-04-06 13:58:58 -04:00
8909876cff
Add local_segment column for phone data yield features
2021-04-05 21:13:36 +00:00
68125dc1bf
Fix the bug of phone data yield features when the input is empty
2021-04-05 20:57:05 +00:00
46f5e24814
Fix Fitbit tz inference from phone data
2021-04-05 11:51:57 -04:00
636b64c61a
Revert "Added more keyboard features."
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This reverts commit 94c72e3172
2021-04-05 11:25:00 -04:00
68e12a2563
Fix bugs of bluetooth feature extraction when number of unique bt_address is 2
2021-04-05 14:09:50 +00:00
8414977331
Fix the bug of utils.py when one participant have multi timezones
2021-04-03 21:20:10 -04:00
94c72e3172
Added more keyboard features.
2021-04-01 20:54:13 -04:00
1ea5b74eff
Fix the bug of utils.py when one participant have multi timezones
2021-03-31 19:34:14 -04:00
136dfef56b
Fix the bug of Analysis Workflows while parsing targets with updated segments
2021-03-30 16:41:50 -04:00
99dae079d5
Add iOS BT and Wifi visible to formats for old devices
2021-03-30 15:32:50 -04:00
30ad3cd586
Validate participant files without device ids
2021-03-28 15:29:08 -04:00
87fbbbe402
Refactor and simplify time segments
2021-03-28 15:29:07 -04:00
c48c1c8f24
Optimize Barnett's computation multi-day segments
2021-03-28 15:29:07 -04:00
d0858f8833
Fix overlapping periodic time segments
2021-03-28 15:29:07 -04:00
e177aa6386
Update create participant files section
2021-03-25 11:39:31 -04:00
a5eb535126
Update visualizations docs & add time flag for heatmap of overall data yield
2021-03-23 21:40:55 -04:00
cfc5039918
Fixed the empty dataframe case in infer_home_locations.py and added array condition in doryab location
2021-03-19 11:15:57 -04:00
294d84277d
Fix bug of sleep intraday PRICE provider when the dataframe of a segment is empty
2021-03-17 15:21:31 -04:00
771c14a928
Improve mysql containers error messages
2021-03-16 20:02:44 -04:00
6e234f7951
Fix warn instead of stop when there are not device ids
2021-03-16 20:02:16 -04:00
4c2f60fffd
Fix bugs in readable datetime and screen episodes
2021-03-16 20:01:43 -04:00
bb737237d0
Fixes for aware_influxdb
2021-03-16 11:26:46 -04:00
4528ab3641
Replace SRC LANGUAGE and FOLDER with SCRIPT
2021-03-14 22:14:13 -04:00
f4b2bd1fb2
Cleanup data/
2021-03-14 13:36:22 -04:00
42cee67664
Add aware_influxdb in beta
2021-03-14 13:33:43 -04:00
3d4a04effe
Refactor testing
2021-03-14 00:09:08 -05:00
2b6447105a
Migrate analysis example to new data stream
2021-03-12 19:52:34 -05:00
fae0c2ac05
Swap TABLE for CONTAINER
2021-03-12 18:14:49 -05:00
d529490999
Migrate fitbit features to new data stream
2021-03-12 12:38:36 -05:00
6e898beca5
Add aware_csv
2021-03-11 19:32:11 -05:00
13174b0c2a
Fix a bug when fitbit data is empty
2021-03-11 14:51:16 -05:00
2ee45995f2
Update config docs and create participant files script
2021-03-11 14:40:33 -05:00
1e66dad838
Fix bug in empatica_zip container script
2021-03-11 14:39:26 -05:00
a79997e0ac
Add empatica_zip docs
2021-03-11 14:39:26 -05:00
d48194fc07
Add fitbitparsed_csv
2021-03-11 14:39:26 -05:00
b97b70e3a1
Add fitbitjson_csv
2021-03-11 14:39:26 -05:00
470f4276af
Add fitbitparsed_mysql
2021-03-11 14:39:26 -05:00
1b0ee4bbf0
Add sleep intraday to fitbitjson_mysql
2021-03-11 14:39:20 -05:00
a420f5ef92
Add sleep summary to fitbitjson_mysql
2021-03-11 14:37:22 -05:00
93baff9f83
Migrate phone keyboard sensor to new data stream
2021-03-11 14:37:22 -05:00
35968e2fd0
Migrate phone log sensor to new data stream
2021-03-11 14:37:22 -05:00
091f9c048a
Migrate phone apps notifications sensor to new data stream
2021-03-11 14:37:22 -05:00
b49dab0949
Migrate phone apps crashes sensor to new data stream
2021-03-11 14:37:22 -05:00
47e1b33816
Add hr intraday to fitbitjson_mysql
2021-03-11 14:37:22 -05:00
47f449555a
Add hr summary to fitbitjson_mysql
2021-03-11 14:37:22 -05:00
72f6b2d621
Add steps intraday to fitbitjson_mysql
2021-03-11 14:37:22 -05:00
9a276c1c66
Add steps summary to jsonfitbit_mysql
2021-03-11 14:37:22 -05:00
13290cd444
Migrate phone wifi visible sensor to new data stream
2021-03-11 14:36:52 -05:00
d42c6e9c91
Migrate phone wifi connected sensor to new data stream
2021-03-11 14:35:34 -05:00
4825962361
Migrate phone screen sensor to new data stream
2021-03-11 14:35:34 -05:00
bd4f647d37
Migrate phone messages sensor to new data stream
2021-03-11 14:35:34 -05:00
3a65b3864d
Migrate phone locations sensor to new data stream
2021-03-11 14:35:34 -05:00
7a50a52a9d
Migrate phone light sensor to new data stream
2021-03-11 14:35:34 -05:00
c1682d8cd3
Migrate phone calls sensor to new data stream
2021-03-11 14:35:34 -05:00
0e96f39599
Migrate phone bluetooth sensor to new data stream
2021-03-11 14:35:34 -05:00
6d06d2b1eb
Update MUTATION structure code & docs for AR, Apps foreground, and battery sensors
2021-03-11 14:35:34 -05:00
6970954358
Change MUTATION structure
2021-03-11 14:35:34 -05:00
58ef276179
Add stream_parameters arg to phone and empatica mutation scripts
2021-03-11 14:35:34 -05:00
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