Meng Li
|
d529490999
|
Migrate fitbit features to new data stream
|
2021-03-12 12:38:36 -05:00 |
JulioV
|
1b8453bec4
|
Remove unused params from config.yaml
|
2021-03-11 14:57:34 -05:00 |
|
JulioV
|
2ee45995f2
|
Update config docs and create participant files script
|
2021-03-11 14:40:33 -05:00 |
|
JulioV
|
a420f5ef92
|
Add sleep summary to fitbitjson_mysql
|
2021-03-11 14:37:22 -05:00 |
|
Meng Li
|
35968e2fd0
|
Migrate phone log sensor to new data stream
|
2021-03-11 14:37:22 -05:00 |
|
JulioV
|
47e1b33816
|
Add hr intraday to fitbitjson_mysql
|
2021-03-11 14:37:22 -05:00 |
|
JulioV
|
47f449555a
|
Add hr summary to fitbitjson_mysql
|
2021-03-11 14:37:22 -05:00 |
|
JulioV
|
72f6b2d621
|
Add steps intraday to fitbitjson_mysql
|
2021-03-11 14:37:22 -05:00 |
|
Meng Li
|
4825962361
|
Migrate phone screen sensor to new data stream
|
2021-03-11 14:35:34 -05:00 |
|
Meng Li
|
c1682d8cd3
|
Migrate phone calls sensor to new data stream
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
6970954358
|
Change MUTATION structure
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
1063b4ca65
|
Add steps summary to fitbitjson_mysql
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
8c79cfc56f
|
Fix OS specific dependcies
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
41711fcdb7
|
Rename download_data add support for py containers
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
f65e3c8b1a
|
Migrate empatica sensors to new data stream
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
fb054b539f
|
Add support for multiple time zones
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
6c51c6c239
|
Move phone_conversation to aware_mysql stream
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
ab1a3dbf79
|
Move phone_activity_recognition to aware_mysql stream
|
2021-03-11 14:35:34 -05:00 |
|
JulioV
|
dc11cb593d
|
Add support for smartphone sources and schemas.
Initial support for accelerometer
Update docs for automatically create participants
Update docs for initial multiple time zones
|
2021-03-11 14:35:33 -05:00 |
|
Meng Li
|
8377c12efb
|
Add sleep intraday features with RAPIDS provider
|
2021-02-26 17:47:01 -05:00 |
nikunjgoel95
|
3d6caea6c4
|
Added the timeathome feature using infer_home_location.py as interim file.
|
2021-02-24 16:57:25 -05:00 |
|
JulioV
|
2e46f56111
|
Empatica zips must be placed in pid folder and small fixes
|
2021-02-21 17:32:41 -05:00 |
|
JulioV
|
4b9857562b
|
Add support for zip input files
|
2021-02-21 17:32:41 -05:00 |
|
JulioV
|
8c726f5d4f
|
Start empatica support
|
2021-02-21 17:32:41 -05:00 |
|
Meng Li
|
b67f990816
|
Add new `FITBIT_DATA_YIELD` `RAPIDS` provider
|
2021-02-02 18:30:21 -05:00 |
|
JulioV
|
4c1e311135
|
Add error msg for invalid phone data yield sensors
|
2021-01-14 14:31:40 -05:00 |
|
JulioV
|
585bf7bc5d
|
Add code so new feature providers can be added for the new four sensors
|
2021-01-14 14:31:40 -05:00 |
|
JulioV
|
8fd1d9dc29
|
Add four new sensors without providers
|
2021-01-14 14:31:40 -05:00 |
|
JulioV
|
51c7739bfc
|
Revert "Start support for phone_keyboard"
This reverts commit dd95b4f941.
|
2020-12-20 16:29:40 -05:00 |
|
JulioV
|
41f19ed781
|
Merge branch 'hotfix/v0.2.3' into develop
|
2020-12-18 11:27:39 -05:00 |
|
JulioV
|
1b65f11b89
|
Fix participant IDS in the example analysis workflow
|
2020-12-18 11:27:04 -05:00 |
|
JulioV
|
dd95b4f941
|
Start support for phone_keyboard
|
2020-12-14 13:42:22 -05:00 |
|
Meng Li
|
58ed986a61
|
Update PIDS in example_config.yaml
|
2020-12-04 18:45:16 -05:00 |
|
Meng Li
|
9a0e57301b
|
Update 4 plots for time_segments
|
2020-12-03 21:00:32 -05:00 |
|
JulioV
|
88743b9a14
|
Update rule to create analysis workflow participant files
|
2020-12-03 12:48:32 -05:00 |
|
JulioV
|
614e759551
|
Refactor day segments to time segments
|
2020-12-02 18:41:03 -05:00 |
|
Meng Li
|
0bd43c139c
|
Update plot#1: histogram_phone_data_yield
|
2020-12-01 14:21:33 -05:00 |
|
Meng Li
|
70991d6667
|
Add dates filter while parsing fitbit data
|
2020-11-30 12:34:14 -05:00 |
|
Meng Li
|
5178be585d
|
Rename modeling.py to modelling.py & Update example_config.yaml
|
2020-11-25 22:35:38 -05:00 |
|
JulioV
|
5f51c94ac6
|
Separate device data configuration and update docs
|
2020-11-25 19:42:11 -05:00 |
|
Meng Li
|
b4a512faf3
|
Add analysis example workflow
|
2020-11-25 16:34:05 -05:00 |
|
JulioV
|
ced3305ddb
|
Update R feature scripts to add sensor and provider names automatically
|
2020-11-25 14:49:42 -05:00 |
|
JulioV
|
f02ca2624d
|
Add phone yield sensor
|
2020-11-24 19:12:16 -05:00 |
|
Meng Li
|
deba6b9e4f
|
Update sleep summary features for segments
|
2020-11-23 12:01:00 -05:00 |
|
Meng Li
|
a71efd6b85
|
Split FITBIT_STEPS into FITBIT_STEPS_SUMMARY and FITBIT_STEPS_INTRADAY
|
2020-11-11 21:16:48 -05:00 |
|
Meng Li
|
b7e22b7440
|
Fix fitbit_parse_heartrate rule's table parameter
|
2020-11-11 20:23:41 -05:00 |
|
Meng Li
|
9fc36f67e2
|
Split FITBIT_HEARTRATE into FITBIT_HEARTRATE_SUMMARY and FITBIT_HEARTRATE_INTRADAY
|
2020-11-11 17:27:46 -05:00 |
|
JulioV
|
6ac4c05772
|
Merge branch 'day_segments' of https://github.com/carissalow/rapids into day_segments
|
2020-11-06 17:18:02 -05:00 |
|
JulioV
|
2aa44fc504
|
Change SENSOR_DATA to DEVICE_DATA
|
2020-11-04 17:16:46 -05:00 |
|
Meng Li
|
82873c285d
|
Make sure feature rules of all sensors support both Python and R scripts
|
2020-11-04 14:05:25 -05:00 |
|
Meng Li
|
39632c66f5
|
Update steps features for segments
|
2020-10-30 18:57:04 -04:00 |
|
Meng Li
|
ed7585c2bf
|
Update heartrate features for segments
|
2020-10-27 17:55:57 -04:00 |
|
JulioV
|
d5931c75d8
|
Refactor script to create participants files
|
2020-10-27 17:13:16 -04:00 |
|
Meng Li
|
c8176b2d90
|
Fix MissingInputException issue of download_fitbit_data rule
|
2020-10-27 14:59:47 -04:00 |
|
Meng Li
|
2601ccde87
|
Fix minor bug of download_fitbit_data rule
|
2020-10-27 13:40:10 -04:00 |
|
JulioV
|
b986599226
|
Add support to read fitbit data from csv files
|
2020-10-26 17:17:53 -04:00 |
|
JulioV
|
234588c94d
|
Expose episode threshold between rows parameter
|
2020-10-26 15:28:19 -04:00 |
|
JulioV
|
1d04aa6807
|
Add check for non-overlapping event day segments
|
2020-10-23 12:15:26 -04:00 |
|
JulioV
|
47adb8bc4b
|
Add tz support to fitbit
|
2020-10-22 14:38:40 -04:00 |
|
JulioV
|
cff83a7ceb
|
Implement parse fitbit data
|
2020-10-22 13:08:52 -04:00 |
|
JulioV
|
c266f6dd10
|
Update participant files structure and fitbit download rule
|
2020-10-20 19:12:01 -04:00 |
|
JulioV
|
24bf62a7ab
|
Update file names
|
2020-10-19 15:07:12 -04:00 |
|
Meng Li
|
29dcd1f284
|
Add accelerometer features of RAPIDS provider
|
2020-10-13 11:42:36 -04:00 |
|
Meng Li
|
236b1cd809
|
Update AR module for segments; Refactor input format
|
2020-10-07 18:11:06 -04:00 |
|
JulioV
|
6b1e006b82
|
Refactor fused location resampling
|
2020-10-07 11:51:31 -04:00 |
|
Meng Li
|
f1717e59e7
|
Update screen&battery episodes features with different segment format
|
2020-09-29 17:13:34 -04:00 |
|
JulioV
|
0dafdd1340
|
Redo resample episodes in R, new battery episodes
|
2020-09-29 15:18:48 -04:00 |
|
JulioV
|
303d1472ed
|
Change how we compute AR episodes
|
2020-09-22 17:32:51 -04:00 |
|
JulioV
|
a851a460e4
|
Change the way we compute battery episodes
|
2020-09-22 16:53:51 -04:00 |
|
Meng Li
|
f806cb44ac
|
Fix the bug of screen duration features for different segments
|
2020-09-18 20:25:29 -04:00 |
|
JulioV
|
4dc8d38c66
|
Optimise assign to day segment
|
2020-09-16 14:54:20 -04:00 |
|
JulioV
|
3c45f6b152
|
Refactor assign to day segment
|
2020-09-14 14:21:36 -04:00 |
|
JulioV
|
98ebf9bd13
|
Migrate conversation to new file structure
|
2020-09-01 17:07:07 -04:00 |
|
JulioV
|
8d87f6e497
|
Migrate app foreground to new file structure
|
2020-09-01 15:25:35 -04:00 |
|
JulioV
|
e643881058
|
Migrate light to new file structure
|
2020-09-01 12:01:24 -04:00 |
|
JulioV
|
eda58d9d2c
|
Migrate wifi to new file structure
|
2020-08-31 18:51:06 -04:00 |
|
JulioV
|
77d9d8f025
|
Migrate bluetooth to new file structure
|
2020-08-31 17:08:26 -04:00 |
|
JulioV
|
132311da77
|
Migrate messages to new file structure
|
2020-08-31 13:34:15 -04:00 |
|
JulioV
|
e269062439
|
Migrate calls to new provider file structure
|
2020-08-28 17:50:49 -04:00 |
|
JulioV
|
011b9736d5
|
Refactor the function to fetch provider features
|
2020-08-28 17:40:23 -04:00 |
|
JulioV
|
b0f1477d7e
|
Migrate location providers to new file structure and segments
|
2020-08-28 13:53:00 -04:00 |
|
JulioV
|
14d2d694ce
|
Migrate messages to new segments
|
2020-08-26 13:01:58 -04:00 |
|
JulioV
|
31ec5b0da4
|
Finalise new day segment structure with calls as example
|
2020-08-26 12:09:53 -04:00 |
|
JulioV
|
026d056378
|
Simplify window workflow
|
2020-08-20 14:51:22 -04:00 |
|
JulioV
|
a0b5b5982b
|
Setup rules and files to support multiple
|
2020-08-20 14:45:09 -04:00 |
|
Meng Li
|
00385dc54d
|
Discard useless parameters and related code of example
|
2020-08-17 10:48:15 -04:00 |
|
JulioV
|
b83f8ead44
|
Refactor snakefiles to smk files and create common.smk
|
2020-08-11 18:45:50 -04:00 |
|
JulioV
|
3f48a47a14
|
Fix optional input files for phone sensed bins
|
2020-08-11 18:02:52 -04:00 |
|
JulioV
|
08ce250839
|
Unify conversation timestamp for ios
|
2020-08-11 16:18:06 -04:00 |
|
nikunjgoel95
|
df7a52cd6c
|
Added Sampling Frequency to Doryab Location Features.
|
2020-08-05 13:02:34 -04:00 |
|
Meng Li
|
973e1669fa
|
Move baselines into a folder; rename column of "num_of_participants" with "num_of_rows" in modeling.py
|
2020-08-05 07:51:35 -04:00 |
|
Meng Li
|
0b65cc0546
|
Add example_profile
|
2020-08-03 17:30:15 -04:00 |
|
Meng Li
|
c2b25a146d
|
Replace sensor name with table name in heatmap_days_by_sensors section
|
2020-08-03 15:19:45 -04:00 |
|
Meng Li
|
e13b89b125
|
Add restore_sql_file rule; notsummarised module; diff platforms for heatmap_days_by_sensors
|
2020-08-03 13:09:16 -04:00 |
|
Meng Li
|
21c3251066
|
Delete mystudy.snakefile and add all rules to models.snakefile
|
2020-07-29 15:25:26 -04:00 |
|
Meng Li
|
c498b8d2df
|
Add hours and bins thresholds for analysis section
|
2020-07-27 22:59:32 -04:00 |
|
Meng Li
|
93157db210
|
Data cleaning section: replace "day_type" with "day_idx"
|
2020-07-27 18:27:36 -04:00 |
|
Meng Li
|
af6678c70c
|
Update visualization section: add MIN_VALID_BINS_PER_HOUR
|
2020-07-26 20:11:25 -04:00 |
|
JulioV
|
388f09a003
|
Add missing wifi table
|
2020-07-24 16:35:41 -04:00 |
|
Meng Li
|
b3aa4d82e1
|
Overall compliance heatmap: shows all dates for all participants (only supports last certain dates previously)
|
2020-07-24 12:58:48 -04:00 |