Primoz
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9ea39dc557
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Standardization as a Snakefile's rule enabled for all E4 sensors.
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2022-06-13 18:17:30 +00:00 |
|
Primoz
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402059871f
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Making standardization as a rule. WIP: done only for BVP.
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2022-06-13 14:12:03 +00:00 |
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Primoz
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094743244d
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Added SO feature for sum all rows that are non zero for BVP and IBI sensors.
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2022-06-13 10:51:22 +00:00 |
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primoz
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e1d7607de4
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Extraction of additional SO features. Min/max has been changed to nsmallest/nlargest means.
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2022-06-10 12:34:48 +00:00 |
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primoz
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f371249b99
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First order features standardization WIP
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2022-06-09 13:35:15 +00:00 |
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primoz
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64e41cfa35
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Second order features standardization in config.yaml.
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2022-06-07 10:39:48 +00:00 |
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primoz
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2c7ac21465
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Added standardization on SO features.
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2022-06-06 13:51:15 +00:00 |
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primoz
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2acf6ff9fb
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Exception handling in case of empty ibi. Changes of the method EDA uses in main.py. Other small corrections.
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2022-06-03 12:34:36 +00:00 |
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primoz
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d300f0f8f0
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Fixed RAPIDS bug: error when IBI.csv is empty.
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2022-06-02 11:43:49 +00:00 |
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Primoz
|
fbf6a77dfc
|
Small misc changes
|
2022-06-02 06:41:53 +00:00 |
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Primoz
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5532043b1f
|
Patching IBI with BVP - completed.
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2022-05-25 19:39:47 +00:00 |
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Primoz
|
bb62497ba6
|
Patching IBI with BVP - selecting appropriate pipeline entry point. WIP
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2022-05-24 11:07:18 +00:00 |
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Primoz
|
2a8f58f5c8
|
Patching IBI with BVP. WIP
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2022-05-20 13:18:45 +00:00 |
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Primoz
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1471c86c62
|
Cr-features version update in rapids venv.
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2022-05-13 13:37:12 +00:00 |
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Primoz
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6864cfe775
|
Changes after thorough testing with available data.
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2022-05-13 13:35:34 +00:00 |
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Primoz
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c1564f0cae
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Changed wrapper method calculate_feature to its newest version (for TEMP and ACC).
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2022-05-11 14:21:21 +00:00 |
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Primoz
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31e36e7400
|
Alternating Second order and full segment features corresponding to config settings.
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2022-05-11 08:50:15 +00:00 |
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Primoz
|
9cf9e1fe14
|
Testing and modifying the code with different E4 data.
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2022-05-10 11:36:49 +00:00 |
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Primoz
|
f62a1302dd
|
Cr-features corrections for ACC and TEMP sensors
|
2022-05-09 11:01:52 +00:00 |
|
Primoz
|
5638367999
|
Implementation of the second order features.
|
2022-04-25 13:07:03 +00:00 |
|
Primoz
|
66451160e9
|
Calculating HRV features with IBI.csv.
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2022-04-20 10:44:51 +00:00 |
=
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8c8fe1fec7
|
Modifications, mostly imports, after changes in cr-features module.
|
2022-04-19 13:24:46 +00:00 |
|
=
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075c64d1e5
|
HRV: changed wrapper calcFeat method with specialized one.
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2022-04-14 11:51:53 +00:00 |
|
=
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3c058e4463
|
Add option to calculate features within windows and store it in CSV (all sensors).
|
2022-04-13 13:18:23 +00:00 |
|
=
|
74cf4ada1c
|
Cr-feat window length for all empaticas sensors.
|
2022-04-12 14:00:44 +00:00 |
|
=
|
1c42347b9b
|
Small changes.
|
2022-04-04 12:19:33 +00:00 |
|
Primoz
|
c050174ca3
|
Various minimal changes.
|
2022-03-31 09:16:00 +00:00 |
|
Primoz
|
f9e40711e7
|
Modified README for RAPIDS-CalculatingFeatures integration.
|
2022-03-30 16:17:07 +00:00 |
|
Primoz
|
a357138f6e
|
Added CF for HRV and shortened test data
|
2022-03-30 15:01:24 +00:00 |
|
Primoz
|
470993eeb0
|
Modification of getSampleRate method for all CF scripts.
|
2022-03-30 15:00:11 +00:00 |
|
=
|
ab0b9227d7
|
Added ACC calculated features and shorter version of ACC data.
|
2022-03-29 09:41:51 +00:00 |
|
=
|
a9244a60fc
|
Corrections for TEMP cf src script.
|
2022-03-28 14:26:37 +00:00 |
|
=
|
8b76c96e47
|
Cleaning existing CF mains' and preparing src script for ACC.
|
2022-03-28 14:18:29 +00:00 |
|
=
|
ca59a54d8f
|
Get a sample rate from two sequential timestamps.
|
2022-03-28 13:50:08 +00:00 |
|
=
|
393dab72f5
|
Added components for the temperature features extraction.
|
2022-03-28 12:37:02 +00:00 |
|
Primoz
|
1902d02a86
|
Updating conda env.
|
2022-03-25 16:27:28 +00:00 |
|
Primoz
|
f389ac9d89
|
Delete CF features folder
|
2022-03-25 16:24:52 +00:00 |
|
Primoz
|
191e53e543
|
Added cf provider for EDA feature processing.
|
2022-03-23 15:13:53 +00:00 |
|
Primoz
|
d3a3f01f29
|
Preparation for the EDA features integration from CF.
|
2022-03-22 15:36:52 +00:00 |
|
Primoz
|
2da0911d4c
|
Skeleton file main.py for EDA CalcFt. integration.
|
2022-03-22 12:48:43 +00:00 |
|
Primoz
|
bd5a811256
|
Shortening input CSVs' and added test for ACC.
|
2022-03-21 12:00:57 +00:00 |
|
Primoz
|
d1c59de2e9
|
Add folder structure for CF testing and EDA test.
|
2022-03-21 10:40:18 +00:00 |
|
Primoz
|
a80f7c0cc4
|
Change of the relative import statements.
|
2022-03-21 10:38:15 +00:00 |
|
Primoz
|
d63158c199
|
Build calc features lib and related packages.
|
2022-03-21 08:28:28 +00:00 |
|
Primoz
|
3f8e1cc252
|
Empatica features calculations with an example ZIP
|
2022-03-16 15:03:32 +00:00 |
|
Primoz
|
dc2b462145
|
Reseting files to defaults - for Minimal Working Example
|
2022-03-16 13:30:19 +00:00 |
|
Primoz
|
50358978cc
|
Testing Git integration on PC
|
2022-03-15 12:49:51 +00:00 |
|
Primoz
|
86c6312574
|
Added .devcontainer to gitignore
|
2022-03-14 18:36:10 +00:00 |
junos
|
d8e9a309f7
|
Rename features and write baseline_interim.
|
2022-03-08 15:10:36 +01:00 |
|
junos
|
a3a4f04ffe
|
Setting with : produces NaNs.
|
2022-03-01 12:02:57 +01:00 |