Commit Graph

1257 Commits (5532043b1f4e4f71ddab9e140c503d44712f07b6)

Author SHA1 Message Date
Primoz 5532043b1f Patching IBI with BVP - completed. 2022-05-25 19:39:47 +00:00
Primoz bb62497ba6 Patching IBI with BVP - selecting appropriate pipeline entry point. WIP 2022-05-24 11:07:18 +00:00
Primoz 2a8f58f5c8 Patching IBI with BVP. WIP 2022-05-20 13:18:45 +00:00
Primoz 1471c86c62 Cr-features version update in rapids venv. 2022-05-13 13:37:12 +00:00
Primoz 6864cfe775 Changes after thorough testing with available data. 2022-05-13 13:35:34 +00:00
Primoz c1564f0cae Changed wrapper method calculate_feature to its newest version (for TEMP and ACC). 2022-05-11 14:21:21 +00:00
Primoz 31e36e7400 Alternating Second order and full segment features corresponding to config settings. 2022-05-11 08:50:15 +00:00
Primoz 9cf9e1fe14 Testing and modifying the code with different E4 data. 2022-05-10 11:36:49 +00:00
Primoz f62a1302dd Cr-features corrections for ACC and TEMP sensors 2022-05-09 11:01:52 +00:00
Primoz 5638367999 Implementation of the second order features. 2022-04-25 13:07:03 +00:00
Primoz 66451160e9 Calculating HRV features with IBI.csv. 2022-04-20 10:44:51 +00:00
= 8c8fe1fec7 Modifications, mostly imports, after changes in cr-features module. 2022-04-19 13:24:46 +00:00
= 075c64d1e5 HRV: changed wrapper calcFeat method with specialized one. 2022-04-14 11:51:53 +00:00
= 3c058e4463 Add option to calculate features within windows and store it in CSV (all sensors). 2022-04-13 13:18:23 +00:00
= 74cf4ada1c Cr-feat window length for all empaticas sensors. 2022-04-12 14:00:44 +00:00
= 1c42347b9b Small changes. 2022-04-04 12:19:33 +00:00
Primoz c050174ca3 Various minimal changes. 2022-03-31 09:16:00 +00:00
Primoz f9e40711e7 Modified README for RAPIDS-CalculatingFeatures integration. 2022-03-30 16:17:07 +00:00
Primoz a357138f6e Added CF for HRV and shortened test data 2022-03-30 15:01:24 +00:00
Primoz 470993eeb0 Modification of getSampleRate method for all CF scripts. 2022-03-30 15:00:11 +00:00
= ab0b9227d7 Added ACC calculated features and shorter version of ACC data. 2022-03-29 09:41:51 +00:00
= a9244a60fc Corrections for TEMP cf src script. 2022-03-28 14:26:37 +00:00
= 8b76c96e47 Cleaning existing CF mains' and preparing src script for ACC. 2022-03-28 14:18:29 +00:00
= ca59a54d8f Get a sample rate from two sequential timestamps. 2022-03-28 13:50:08 +00:00
= 393dab72f5 Added components for the temperature features extraction. 2022-03-28 12:37:02 +00:00
Primoz 1902d02a86 Updating conda env. 2022-03-25 16:27:28 +00:00
Primoz f389ac9d89 Delete CF features folder 2022-03-25 16:24:52 +00:00
Primoz 191e53e543 Added cf provider for EDA feature processing. 2022-03-23 15:13:53 +00:00
Primoz d3a3f01f29 Preparation for the EDA features integration from CF. 2022-03-22 15:36:52 +00:00
Primoz 2da0911d4c Skeleton file main.py for EDA CalcFt. integration. 2022-03-22 12:48:43 +00:00
Primoz bd5a811256 Shortening input CSVs' and added test for ACC. 2022-03-21 12:00:57 +00:00
Primoz d1c59de2e9 Add folder structure for CF testing and EDA test. 2022-03-21 10:40:18 +00:00
Primoz a80f7c0cc4 Change of the relative import statements. 2022-03-21 10:38:15 +00:00
Primoz d63158c199 Build calc features lib and related packages. 2022-03-21 08:28:28 +00:00
Primoz 3f8e1cc252 Empatica features calculations with an example ZIP 2022-03-16 15:03:32 +00:00
Primoz dc2b462145 Reseting files to defaults - for Minimal Working Example 2022-03-16 13:30:19 +00:00
Primoz 50358978cc Testing Git integration on PC 2022-03-15 12:49:51 +00:00
Primoz 86c6312574 Added .devcontainer to gitignore 2022-03-14 18:36:10 +00:00
junos d8e9a309f7 Rename features and write baseline_interim. 2022-03-08 15:10:36 +01:00
junos a3a4f04ffe Setting with : produces NaNs. 2022-03-01 12:02:57 +01:00
junos aedb8b6785 Write questionnaire data to data/interim. 2022-03-01 12:02:36 +01:00
junos b5a6317f4b Calculate JCQ control and demand control ratio.
Include norms and corresponding quartile.
2022-02-28 18:51:47 +01:00
junos 2fed962644 Calculate JCQ demand score.
Hardcode question IDs to be reversed.
2022-02-28 18:30:41 +01:00
junos 30ac8b1cd5 Start calculating demand control features. 2022-02-23 19:08:10 +01:00
junos 9a74e74d08 Add the baseline features rule to snakefile.
Correct age calculation for a single value instead of dataframe.
2022-02-23 18:15:26 +01:00
junos 07da6be398 Add age, gender, and language as features.
Move calculation of age from merge_baseline_data.py to baseline_features.py.
2022-02-23 18:05:23 +01:00
junos 176367631b Prepare baseline feature rule. 2022-02-23 11:09:33 +01:00
junos bf9c764c97 Split baseline data to participants.
And some csv I/O settings.
2022-02-04 18:37:57 +01:00
junos 16e608db74 First merge baseline datasets. 2022-02-04 18:21:42 +01:00
junos 204f6f50b0 Read the relevant files. 2022-02-04 18:06:02 +01:00