Commit Graph

68 Commits (2a8f58f5c86aadbb08a9869127e8e9a140fcf7a1)

Author SHA1 Message Date
Primoz 2a8f58f5c8 Patching IBI with BVP. WIP 2022-05-20 13:18:45 +00:00
Primoz 31e36e7400 Alternating Second order and full segment features corresponding to config settings. 2022-05-11 08:50:15 +00:00
Primoz 5638367999 Implementation of the second order features. 2022-04-25 13:07:03 +00:00
= 3c058e4463 Add option to calculate features within windows and store it in CSV (all sensors). 2022-04-13 13:18:23 +00:00
Meng Li 5bad3eb8b5
Data cleaning (#166)
* Refactor data cleaning module: move it from example workflow to main directory

* Replace NAs with 0 in selected event-based features

* Add one step to drop highly correlated features

Co-authored-by: Weiyu <weiyuhuang7@gmail.com>
2021-11-19 10:34:36 -05:00
Meng Li f340b89c58 Temporary revert PHONE_LOCATIONS BARNETT provider to use R script 2021-09-23 18:16:13 -04:00
Meng Li a3fb718aea Refactor PHONE_LOCATIONS DORYAB provider to compute features based on location episodes 2021-09-23 17:40:06 -04:00
Meng Li a8a178486b Refactor PHONE_CALLS RAPIDS provider to compute features based on call episodes or events 2021-09-15 10:28:37 -04:00
JulioV 834bd3b93d Refactor in Python of Barnett provider
Co-authored-by: Shirley Hayati <sahayati@ucdavis.edu>
Co-authored-by: JulioV <JulioV@users.noreply.github.com>
2021-08-04 15:33:02 -04:00
kirtirajk 4b8698a4c6 adding app_episode with the changes as mentioned in the comments 2021-06-10 14:17:56 -04:00
Meng Li 9687081fbe Refactor the rule phone_locations_add_doryab_extra_columns 2021-05-28 09:48:36 -04:00
Meng Li 0d6f51be8b Refactor location features from Doryab provider & add a new strategy to infer home location & fix bugs 2021-05-26 17:36:52 -04:00
Meng Li edf71e055d Add the EXCLUDE_SLEEP module for steps intraday features 2021-05-21 15:23:21 -04:00
JulioV 9c56422529 Add calories intraday features 2021-04-20 12:00:38 -04:00
JulioV c48c1c8f24 Optimize Barnett's computation multi-day segments 2021-03-28 15:29:07 -04:00
Meng Li d529490999 Migrate fitbit features to new data stream 2021-03-12 12:38:36 -05:00
JulioV a420f5ef92 Add sleep summary to fitbitjson_mysql 2021-03-11 14:37:22 -05:00
Meng Li 35968e2fd0 Migrate phone log sensor to new data stream 2021-03-11 14:37:22 -05:00
JulioV 47e1b33816 Add hr intraday to fitbitjson_mysql 2021-03-11 14:37:22 -05:00
JulioV 47f449555a Add hr summary to fitbitjson_mysql 2021-03-11 14:37:22 -05:00
JulioV 72f6b2d621 Add steps intraday to fitbitjson_mysql 2021-03-11 14:37:22 -05:00
Meng Li 4825962361 Migrate phone screen sensor to new data stream 2021-03-11 14:35:34 -05:00
Meng Li c1682d8cd3 Migrate phone calls sensor to new data stream 2021-03-11 14:35:34 -05:00
JulioV 1063b4ca65 Add steps summary to fitbitjson_mysql 2021-03-11 14:35:34 -05:00
JulioV 6c51c6c239 Move phone_conversation to aware_mysql stream 2021-03-11 14:35:34 -05:00
JulioV ab1a3dbf79 Move phone_activity_recognition to aware_mysql stream 2021-03-11 14:35:34 -05:00
Meng Li 8377c12efb Add sleep intraday features with RAPIDS provider 2021-02-26 17:47:01 -05:00
nikunjgoel95 3d6caea6c4 Added the timeathome feature using infer_home_location.py as interim file. 2021-02-24 16:57:25 -05:00
JulioV 8c726f5d4f Start empatica support 2021-02-21 17:32:41 -05:00
Meng Li b67f990816 Add new `FITBIT_DATA_YIELD` `RAPIDS` provider 2021-02-02 18:30:21 -05:00
JulioV 585bf7bc5d Add code so new feature providers can be added for the new four sensors 2021-01-14 14:31:40 -05:00
JulioV 51c7739bfc Revert "Start support for phone_keyboard"
This reverts commit dd95b4f941.
2020-12-20 16:29:40 -05:00
JulioV dd95b4f941 Start support for phone_keyboard 2020-12-14 13:42:22 -05:00
JulioV 614e759551 Refactor day segments to time segments 2020-12-02 18:41:03 -05:00
Meng Li b4a512faf3 Add analysis example workflow 2020-11-25 16:34:05 -05:00
JulioV f02ca2624d Add phone yield sensor 2020-11-24 19:12:16 -05:00
Meng Li deba6b9e4f Update sleep summary features for segments 2020-11-23 12:01:00 -05:00
Meng Li a71efd6b85 Split FITBIT_STEPS into FITBIT_STEPS_SUMMARY and FITBIT_STEPS_INTRADAY 2020-11-11 21:16:48 -05:00
Meng Li 9fc36f67e2 Split FITBIT_HEARTRATE into FITBIT_HEARTRATE_SUMMARY and FITBIT_HEARTRATE_INTRADAY 2020-11-11 17:27:46 -05:00
Meng Li 82873c285d Make sure feature rules of all sensors support both Python and R scripts 2020-11-04 14:05:25 -05:00
Meng Li 39632c66f5 Update steps features for segments 2020-10-30 18:57:04 -04:00
Meng Li ed7585c2bf Update heartrate features for segments 2020-10-27 17:55:57 -04:00
JulioV 234588c94d Expose episode threshold between rows parameter 2020-10-26 15:28:19 -04:00
JulioV c266f6dd10 Update participant files structure and fitbit download rule 2020-10-20 19:12:01 -04:00
JulioV 24bf62a7ab Update file names 2020-10-19 15:07:12 -04:00
Meng Li 29dcd1f284 Add accelerometer features of RAPIDS provider 2020-10-13 11:42:36 -04:00
Meng Li 236b1cd809 Update AR module for segments; Refactor input format 2020-10-07 18:11:06 -04:00
JulioV 6b1e006b82 Refactor fused location resampling 2020-10-07 11:51:31 -04:00
Meng Li f1717e59e7 Update screen&battery episodes features with different segment format 2020-09-29 17:13:34 -04:00
JulioV 0dafdd1340 Redo resample episodes in R, new battery episodes 2020-09-29 15:18:48 -04:00