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RAPIDS
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Virtual Environments
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RAPIDS
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carissalow/rapids
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Setup
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Setup
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File Structure
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Installation
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Configuration
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Execution
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Example Workflows
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Example Workflows
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Minimal
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Analysis
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Behavioral Features
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Behavioral Features
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Introduction
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Phone
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Phone
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Phone Accelerometer
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Phone Activity Recognition
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Phone Applications Foreground
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Phone Battery
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< a href = "../../features/phone-bluetooth/" class = "md-nav__link" >
Phone Bluetooth
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< a href = "../../features/phone-calls/" class = "md-nav__link" >
Phone Calls
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Phone Conversation
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Phone Data Yield
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Phone Light
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Phone Locations
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Phone Messages
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Phone Screen
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Phone WiFI Connected
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Phone WiFI Visible
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Fitbit
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Fitbit
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Fitbit Heart Rate Summary
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Fitbit Heart Rate Intraday
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Fitbit Sleep Summary
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Fitbit Steps Summary
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Fitbit Steps Intraday
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Add New Features
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Visualizations
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< h1 > Virtual Environments< / h1 >
< h2 id = "python-virtual-environment" > Python Virtual Environment< a class = "headerlink" href = "#python-virtual-environment" title = "Permanent link" > ¶ < / a > < / h2 >
< h3 id = "add-new-packages" > Add new packages< a class = "headerlink" href = "#add-new-packages" title = "Permanent link" > ¶ < / a > < / h3 >
< p > Try to install any new package using < code > conda install -c CHANNEL PACKAGE_NAME< / code > (you can use < code > pip< / code > if the package is only available there). Make sure your Python virtual environment is active (< code > conda activate YOUR_ENV< / code > ).< / p >
< h3 id = "remove-packages" > Remove packages< a class = "headerlink" href = "#remove-packages" title = "Permanent link" > ¶ < / a > < / h3 >
< p > Uninstall packages using the same manager you used to install them < code > conda remove PACKAGE_NAME< / code > or < code > pip uninstall PACKAGE_NAME< / code > < / p >
< h3 id = "update-your-conda-environmentyaml" > Update your conda < code > environment.yaml< / code > < a class = "headerlink" href = "#update-your-conda-environmentyaml" title = "Permanent link" > ¶ < / a > < / h3 >
< p > After installing or removing a package you can use the following command in your terminal to update your < code > environment.yaml< / code > before publishing your pipeline. Note that we ignore the package version for < code > libfortran< / code > to keep compatibility with Linux:
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< div class = "highlight" > < pre > < span > < / span > < code > conda env < span class = "nb" > export< / span > --no-builds < span class = "p" > |< / span > sed < span class = "s1" > ' s/^.*libgfortran.*$/ - libgfortran/' < / span > > environment.yml
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< / code > < / pre > < / div > < / p >
< h2 id = "r-virtual-environment" > R Virtual Environment< a class = "headerlink" href = "#r-virtual-environment" title = "Permanent link" > ¶ < / a > < / h2 >
< h3 id = "add-new-packages_1" > Add new packages< a class = "headerlink" href = "#add-new-packages_1" title = "Permanent link" > ¶ < / a > < / h3 >
< ol >
< li > Open your terminal and navigate to RAPIDS’ root folder< / li >
< li > Run < code > R< / code > to open an R interactive session< / li >
< li > Run < code > renv::install("PACKAGE_NAME")< / code > < / li >
< / ol >
< h3 id = "remove-packages_1" > Remove packages< a class = "headerlink" href = "#remove-packages_1" title = "Permanent link" > ¶ < / a > < / h3 >
< ol >
< li > Open your terminal and navigate to RAPIDS’ root folder< / li >
< li > Run < code > R< / code > to open an R interactive session< / li >
< li > Run < code > renv::remove("PACKAGE_NAME")< / code > < / li >
< / ol >
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< p > After installing or removing a package you can use the following command in your terminal to update your < code > renv.lock< / code > before publishing your pipeline.< / p >
< ol >
< li > Open your terminal and navigate to RAPIDS’ root folder< / li >
< li > Run < code > R< / code > to open an R interactive session< / li >
< li > Run < code > renv::snapshot()< / code > (renv will ask you to confirm any updates to this file)< / li >
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