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<!doctype html>
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<html lang="en" class="no-js">
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<head>
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<meta charset="utf-8">
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<meta name="viewport" content="width=device-width,initial-scale=1">
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<link rel="shortcut icon" href="/assets/images/favicon.png">
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<meta name="generator" content="mkdocs-1.1.2, mkdocs-material-6.1.4+insiders-1.9.0">
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<title>RAPIDS</title>
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<link rel="stylesheet" href="/assets/stylesheets/main.a2a6bca7.min.css">
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<link rel="stylesheet" href="/assets/stylesheets/palette.c308bc62.min.css">
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<link href="https://fonts.gstatic.com" rel="preconnect" crossorigin>
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<link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Roboto:300,400,400i,700%7CRoboto+Mono&display=fallback">
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<style>body,input{font-family:"Roboto",-apple-system,BlinkMacSystemFont,Helvetica,Arial,sans-serif}code,kbd,pre{font-family:"Roboto Mono",SFMono-Regular,Consolas,Menlo,monospace}</style>
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<link rel="stylesheet" href="/stylesheets/extra.css">
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</head>
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<body dir="ltr" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue">
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<script>var palette=JSON.parse(localStorage.getItem("__palette")||"{}");if(void 0!==palette.color)for(var key in palette.color)document.body.setAttribute("data-md-color-"+key,palette.color[key])</script>
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<input class="md-toggle" data-md-toggle="drawer" type="checkbox" id="__drawer" autocomplete="off">
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<input class="md-toggle" data-md-toggle="search" type="checkbox" id="__search" autocomplete="off">
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<label class="md-overlay" for="__drawer"></label>
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<div data-md-component="skip">
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</div>
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<div data-md-component="announce">
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</div>
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<header class="md-header" data-md-component="header">
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<nav class="md-header-nav md-grid" aria-label="Header">
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<a href="/." title="RAPIDS" class="md-header-nav__button md-logo" aria-label="RAPIDS">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
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</a>
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<label class="md-header-nav__button md-icon" for="__drawer">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M3 6h18v2H3V6m0 5h18v2H3v-2m0 5h18v2H3v-2z"/></svg>
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</label>
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<div class="md-header-nav__title" data-md-component="header-title">
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<div class="md-header-nav__ellipsis">
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<div class="md-header-nav__topic">
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<span class="md-ellipsis">
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RAPIDS
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</span>
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</div>
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<div class="md-header-nav__topic" data-md-component="header-topic">
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<span class="md-ellipsis">
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</span>
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</div>
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</div>
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</div>
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<div class="md-header-nav__options">
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<button class="md-header-nav__button md-icon" title="Switch to light mode" aria-label="Switch to light mode" data-md-option="palette" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M17 7H7a5 5 0 00-5 5 5 5 0 005 5h10a5 5 0 005-5 5 5 0 00-5-5m0 8a3 3 0 01-3-3 3 3 0 013-3 3 3 0 013 3 3 3 0 01-3 3z"/></svg>
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</button>
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<button class="md-header-nav__button md-icon" title="Switch to dark mode" aria-label="Switch to dark mode" data-md-option="palette" data-md-color-scheme="slate" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M7 10a2 2 0 012 2 2 2 0 01-2 2 2 2 0 01-2-2 2 2 0 012-2m10-3a5 5 0 015 5 5 5 0 01-5 5H7a5 5 0 01-5-5 5 5 0 015-5h10M7 9a3 3 0 00-3 3 3 3 0 003 3h10a3 3 0 003-3 3 3 0 00-3-3H7z"/></svg>
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</button>
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</div>
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<label class="md-header-nav__button md-icon" for="__search">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
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</label>
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<div class="md-search" data-md-component="search" role="dialog">
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<label class="md-search__overlay" for="__search"></label>
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<div class="md-search__inner" role="search">
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<form class="md-search__form" name="search">
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<input type="text" class="md-search__input" name="query" aria-label="Search" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false" data-md-component="search-query" data-md-state="active">
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<label class="md-search__icon md-icon" for="__search">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
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</label>
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<button type="reset" class="md-search__icon md-icon" aria-label="Clear" data-md-component="search-reset" tabindex="-1">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 6.41L17.59 5 12 10.59 6.41 5 5 6.41 10.59 12 5 17.59 6.41 19 12 13.41 17.59 19 19 17.59 13.41 12 19 6.41z"/></svg>
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</button>
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<div class="md-search__suggest" data-md-component="search-suggest"></div>
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</form>
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<div class="md-search__output">
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<div class="md-search__scrollwrap" data-md-scrollfix>
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<div class="md-search-result" data-md-component="search-result">
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<div class="md-search-result__meta">
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Initializing search
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</div>
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<ol class="md-search-result__list"></ol>
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</div>
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</div>
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</div>
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</div>
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</div>
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||||
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<div class="md-header-nav__source">
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<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
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<div class="md-source__icon md-icon">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
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</div>
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<div class="md-source__repository">
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carissalow/rapids
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</div>
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</a>
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</div>
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</nav>
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</header>
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<div class="md-container" data-md-component="container">
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<main class="md-main" data-md-component="main">
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<div class="md-main__inner md-grid">
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<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
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<div class="md-sidebar__scrollwrap">
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<div class="md-sidebar__inner">
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<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
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<label class="md-nav__title" for="__drawer">
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<a href="/." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
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||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
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||||
</a>
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||||
RAPIDS
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</label>
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||||
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||||
<div class="md-nav__source">
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||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
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</div>
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||||
<div class="md-source__repository">
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carissalow/rapids
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</div>
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</a>
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</div>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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||||
<a href="/." class="md-nav__link">
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Home
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</a>
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</li>
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" >
|
||||
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||||
<label class="md-nav__link" for="nav-2">
|
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Setup
|
||||
<span class="md-nav__icon md-icon"></span>
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</label>
|
||||
<nav class="md-nav" aria-label="Setup" data-md-level="1">
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<label class="md-nav__title" for="nav-2">
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<span class="md-nav__icon md-icon"></span>
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Setup
|
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</label>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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<a href="/file-structure/" class="md-nav__link">
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File Structure
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</a>
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</li>
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<li class="md-nav__item">
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<a href="/setup/installation/" class="md-nav__link">
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Installation
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</a>
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</li>
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||||
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||||
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||||
<li class="md-nav__item">
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||||
<a href="/setup/configuration/" class="md-nav__link">
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Initial Configuration
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||||
</a>
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</li>
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||||
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||||
|
||||
|
||||
|
||||
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||||
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||||
<li class="md-nav__item">
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||||
<a href="/setup/execution/" class="md-nav__link">
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||||
Execution
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||||
</a>
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</li>
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||||
|
||||
|
||||
</ul>
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</nav>
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</li>
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||||
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||||
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||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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||||
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||||
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||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
|
||||
|
||||
<label class="md-nav__link" for="nav-3">
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||||
Example Workflows
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-3">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
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||||
|
||||
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||||
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||||
<li class="md-nav__item">
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||||
<a href="/workflow-examples/minimal/" class="md-nav__link">
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||||
Minimal
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||||
</a>
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||||
</li>
|
||||
|
||||
|
||||
</ul>
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||||
</nav>
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||||
</li>
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||||
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||||
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||||
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||||
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||||
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||||
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||||
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||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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||||
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||||
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||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4">
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||||
Behavioral Features
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||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-4">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
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||||
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||||
<li class="md-nav__item">
|
||||
<a href="/features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-5" type="checkbox" id="nav-5" >
|
||||
|
||||
<label class="md-nav__link" for="nav-5">
|
||||
Developers
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Developers" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-5">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Developers
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/developers/remote-support/" class="md-nav__link">
|
||||
Remote Support
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/developers/virtual-environments/" class="md-nav__link">
|
||||
Virtual Environments
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/developers/documentation/" class="md-nav__link">
|
||||
Documentation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/developers/testing/" class="md-nav__link">
|
||||
Testing
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/developers/test-cases/" class="md-nav__link">
|
||||
Test cases
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-6" type="checkbox" id="nav-6" >
|
||||
|
||||
<label class="md-nav__link" for="nav-6">
|
||||
Others
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Others" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-6">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Others
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/faq/" class="md-nav__link">
|
||||
Frequently Asked Questions
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/team/" class="md-nav__link">
|
||||
Team
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="/citation/" class="md-nav__link">
|
||||
Citation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
<div class="md-content">
|
||||
<article class="md-content__inner md-typeset">
|
||||
|
||||
<h1>404 - Not found</h1>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</article>
|
||||
</div>
|
||||
</div>
|
||||
</main>
|
||||
|
||||
|
||||
<footer class="md-footer">
|
||||
|
||||
<div class="md-footer-meta md-typeset">
|
||||
<div class="md-footer-meta__inner md-grid">
|
||||
<div class="md-footer-copyright">
|
||||
|
||||
<div class="md-footer-copyright__highlight">
|
||||
Released under AGPL
|
||||
</div>
|
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|
||||
|
||||
Made with
|
||||
<a href="https://squidfunk.github.io/mkdocs-material-insiders/" target="_blank" rel="noopener">
|
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Material for MkDocs Insiders
|
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</a>
|
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|
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</div>
|
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|
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<div class="md-footer-social">
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<a href="https://twitter.com/julio_ui" target="_blank" rel="noopener" title="twitter.com" class="md-footer-social__link">
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|
||||
</a>
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||||
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</div>
|
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|
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</div>
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</div>
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</footer>
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</div>
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<script src="/assets/javascripts/vendor.12f39d2a.min.js"></script>
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<script src="/assets/javascripts/bundle.d371fdb2.min.js"></script><script id="__lang" type="application/json">{"clipboard.copy": "Copy to clipboard", "clipboard.copied": "Copied to clipboard", "search.config.lang": "en", "search.config.pipeline": "trimmer, stopWordFilter", "search.config.separator": "[\\s\\-]+", "search.placeholder": "Search", "search.result.placeholder": "Type to start searching", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.term.missing": "Missing"}</script>
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<script>
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app = initialize({
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base: "/",
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features: ['navigation.sections', 'search.suggest', 'search.highlight'],
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search: Object.assign({
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worker: "/assets/javascripts/worker/search.0f64ce30.min.js"
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}, typeof search !== "undefined" && search),
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version: {'method': 'mike'}
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})
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</script>
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<script src="/javascripts/config.js"></script>
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<script src="https://polyfill.io/v3/polyfill.min.js?features=es6"></script>
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<script src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
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</body>
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</html>
|
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|
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www.rapids.science
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@ -0,0 +1,18 @@
|
|||
/*!
|
||||
* Lunr languages, `Danish` language
|
||||
* https://github.com/MihaiValentin/lunr-languages
|
||||
*
|
||||
* Copyright 2014, Mihai Valentin
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
/*!
|
||||
* based on
|
||||
* Snowball JavaScript Library v0.3
|
||||
* http://code.google.com/p/urim/
|
||||
* http://snowball.tartarus.org/
|
||||
*
|
||||
* Copyright 2010, Oleg Mazko
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
|
||||
!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.da=function(){this.pipeline.reset(),this.pipeline.add(e.da.trimmer,e.da.stopWordFilter,e.da.stemmer),this.searchPipeline&&(this.searchPipeline.reset(),this.searchPipeline.add(e.da.stemmer))},e.da.wordCharacters="A-Za-zªºÀ-ÖØ-öø-ʸˠ-ˤᴀ-ᴥᴬ-ᵜᵢ-ᵥᵫ-ᵷᵹ-ᶾḀ-ỿⁱⁿₐ-ₜKÅℲⅎⅠ-ↈⱠ-ⱿꜢ-ꞇꞋ-ꞭꞰ-ꞷꟷ-ꟿꬰ-ꭚꭜ-ꭤff-stA-Za-z",e.da.trimmer=e.trimmerSupport.generateTrimmer(e.da.wordCharacters),e.Pipeline.registerFunction(e.da.trimmer,"trimmer-da"),e.da.stemmer=function(){var r=e.stemmerSupport.Among,i=e.stemmerSupport.SnowballProgram,n=new function(){function e(){var e,r=f.cursor+3;if(d=f.limit,0<=r&&r<=f.limit){for(a=r;;){if(e=f.cursor,f.in_grouping(w,97,248)){f.cursor=e;break}if(f.cursor=e,e>=f.limit)return;f.cursor++}for(;!f.out_grouping(w,97,248);){if(f.cursor>=f.limit)return;f.cursor++}d=f.cursor,d<a&&(d=a)}}function n(){var e,r;if(f.cursor>=d&&(r=f.limit_backward,f.limit_backward=d,f.ket=f.cursor,e=f.find_among_b(c,32),f.limit_backward=r,e))switch(f.bra=f.cursor,e){case 1:f.slice_del();break;case 2:f.in_grouping_b(p,97,229)&&f.slice_del()}}function t(){var e,r=f.limit-f.cursor;f.cursor>=d&&(e=f.limit_backward,f.limit_backward=d,f.ket=f.cursor,f.find_among_b(l,4)?(f.bra=f.cursor,f.limit_backward=e,f.cursor=f.limit-r,f.cursor>f.limit_backward&&(f.cursor--,f.bra=f.cursor,f.slice_del())):f.limit_backward=e)}function s(){var e,r,i,n=f.limit-f.cursor;if(f.ket=f.cursor,f.eq_s_b(2,"st")&&(f.bra=f.cursor,f.eq_s_b(2,"ig")&&f.slice_del()),f.cursor=f.limit-n,f.cursor>=d&&(r=f.limit_backward,f.limit_backward=d,f.ket=f.cursor,e=f.find_among_b(m,5),f.limit_backward=r,e))switch(f.bra=f.cursor,e){case 1:f.slice_del(),i=f.limit-f.cursor,t(),f.cursor=f.limit-i;break;case 2:f.slice_from("løs")}}function o(){var e;f.cursor>=d&&(e=f.limit_backward,f.limit_backward=d,f.ket=f.cursor,f.out_grouping_b(w,97,248)?(f.bra=f.cursor,u=f.slice_to(u),f.limit_backward=e,f.eq_v_b(u)&&f.slice_del()):f.limit_backward=e)}var a,d,u,c=[new r("hed",-1,1),new r("ethed",0,1),new r("ered",-1,1),new r("e",-1,1),new r("erede",3,1),new r("ende",3,1),new r("erende",5,1),new r("ene",3,1),new r("erne",3,1),new r("ere",3,1),new r("en",-1,1),new r("heden",10,1),new r("eren",10,1),new r("er",-1,1),new r("heder",13,1),new r("erer",13,1),new r("s",-1,2),new r("heds",16,1),new r("es",16,1),new r("endes",18,1),new r("erendes",19,1),new r("enes",18,1),new r("ernes",18,1),new r("eres",18,1),new r("ens",16,1),new r("hedens",24,1),new r("erens",24,1),new r("ers",16,1),new r("ets",16,1),new r("erets",28,1),new r("et",-1,1),new r("eret",30,1)],l=[new r("gd",-1,-1),new r("dt",-1,-1),new r("gt",-1,-1),new r("kt",-1,-1)],m=[new r("ig",-1,1),new r("lig",0,1),new r("elig",1,1),new r("els",-1,1),new r("løst",-1,2)],w=[17,65,16,1,0,0,0,0,0,0,0,0,0,0,0,0,48,0,128],p=[239,254,42,3,0,0,0,0,0,0,0,0,0,0,0,0,16],f=new i;this.setCurrent=function(e){f.setCurrent(e)},this.getCurrent=function(){return f.getCurrent()},this.stem=function(){var r=f.cursor;return e(),f.limit_backward=r,f.cursor=f.limit,n(),f.cursor=f.limit,t(),f.cursor=f.limit,s(),f.cursor=f.limit,o(),!0}};return function(e){return"function"==typeof e.update?e.update(function(e){return n.setCurrent(e),n.stem(),n.getCurrent()}):(n.setCurrent(e),n.stem(),n.getCurrent())}}(),e.Pipeline.registerFunction(e.da.stemmer,"stemmer-da"),e.da.stopWordFilter=e.generateStopWordFilter("ad af alle alt anden at blev blive bliver da de dem den denne der deres det dette dig din disse dog du efter eller en end er et for fra ham han hans har havde have hende hendes her hos hun hvad hvis hvor i ikke ind jeg jer jo kunne man mange med meget men mig min mine mit mod ned noget nogle nu når og også om op os over på selv sig sin sine sit skal skulle som sådan thi til ud under var vi vil ville vor være været".split(" ")),e.Pipeline.registerFunction(e.da.stopWordFilter,"stopWordFilter-da")}});
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!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");var r="2"==e.version[0];e.ja=function(){this.pipeline.reset(),this.pipeline.add(e.ja.trimmer,e.ja.stopWordFilter,e.ja.stemmer),r?this.tokenizer=e.ja.tokenizer:(e.tokenizer&&(e.tokenizer=e.ja.tokenizer),this.tokenizerFn&&(this.tokenizerFn=e.ja.tokenizer))};var t=new e.TinySegmenter;e.ja.tokenizer=function(i){var n,o,s,p,a,u,m,l,c,f;if(!arguments.length||null==i||void 0==i)return[];if(Array.isArray(i))return i.map(function(t){return r?new e.Token(t.toLowerCase()):t.toLowerCase()});for(o=i.toString().toLowerCase().replace(/^\s+/,""),n=o.length-1;n>=0;n--)if(/\S/.test(o.charAt(n))){o=o.substring(0,n+1);break}for(a=[],s=o.length,c=0,l=0;c<=s;c++)if(u=o.charAt(c),m=c-l,u.match(/\s/)||c==s){if(m>0)for(p=t.segment(o.slice(l,c)).filter(function(e){return!!e}),f=l,n=0;n<p.length;n++)r?a.push(new e.Token(p[n],{position:[f,p[n].length],index:a.length})):a.push(p[n]),f+=p[n].length;l=c+1}return a},e.ja.stemmer=function(){return function(e){return e}}(),e.Pipeline.registerFunction(e.ja.stemmer,"stemmer-ja"),e.ja.wordCharacters="一二三四五六七八九十百千万億兆一-龠々〆ヵヶぁ-んァ-ヴーア-ン゙a-zA-Za-zA-Z0-90-9",e.ja.trimmer=e.trimmerSupport.generateTrimmer(e.ja.wordCharacters),e.Pipeline.registerFunction(e.ja.trimmer,"trimmer-ja"),e.ja.stopWordFilter=e.generateStopWordFilter("これ それ あれ この その あの ここ そこ あそこ こちら どこ だれ なに なん 何 私 貴方 貴方方 我々 私達 あの人 あのかた 彼女 彼 です あります おります います は が の に を で え から まで より も どの と し それで しかし".split(" ")),e.Pipeline.registerFunction(e.ja.stopWordFilter,"stopWordFilter-ja"),e.jp=e.ja,e.Pipeline.registerFunction(e.jp.stemmer,"stemmer-jp"),e.Pipeline.registerFunction(e.jp.trimmer,"trimmer-jp"),e.Pipeline.registerFunction(e.jp.stopWordFilter,"stopWordFilter-jp")}});
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|
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module.exports=require("./lunr.ja");
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|
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!function(e,t){"function"==typeof define&&define.amd?define(t):"object"==typeof exports?module.exports=t():t()(e.lunr)}(this,function(){return function(e){e.multiLanguage=function(){for(var t=Array.prototype.slice.call(arguments),i=t.join("-"),r="",n=[],s=[],p=0;p<t.length;++p)"en"==t[p]?(r+="\\w",n.unshift(e.stopWordFilter),n.push(e.stemmer),s.push(e.stemmer)):(r+=e[t[p]].wordCharacters,e[t[p]].stopWordFilter&&n.unshift(e[t[p]].stopWordFilter),e[t[p]].stemmer&&(n.push(e[t[p]].stemmer),s.push(e[t[p]].stemmer)));var o=e.trimmerSupport.generateTrimmer(r);return e.Pipeline.registerFunction(o,"lunr-multi-trimmer-"+i),n.unshift(o),function(){this.pipeline.reset(),this.pipeline.add.apply(this.pipeline,n),this.searchPipeline&&(this.searchPipeline.reset(),this.searchPipeline.add.apply(this.searchPipeline,s))}}}});
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|
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/*!
|
||||
* Lunr languages, `Norwegian` language
|
||||
* https://github.com/MihaiValentin/lunr-languages
|
||||
*
|
||||
* Copyright 2014, Mihai Valentin
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
/*!
|
||||
* based on
|
||||
* Snowball JavaScript Library v0.3
|
||||
* http://code.google.com/p/urim/
|
||||
* http://snowball.tartarus.org/
|
||||
*
|
||||
* Copyright 2010, Oleg Mazko
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
|
||||
!function(e,r){"function"==typeof define&&define.amd?define(r):"object"==typeof exports?module.exports=r():r()(e.lunr)}(this,function(){return function(e){if(void 0===e)throw new Error("Lunr is not present. Please include / require Lunr before this script.");if(void 0===e.stemmerSupport)throw new Error("Lunr stemmer support is not present. Please include / require Lunr stemmer support before this script.");e.no=function(){this.pipeline.reset(),this.pipeline.add(e.no.trimmer,e.no.stopWordFilter,e.no.stemmer),this.searchPipeline&&(this.searchPipeline.reset(),this.searchPipeline.add(e.no.stemmer))},e.no.wordCharacters="A-Za-zªºÀ-ÖØ-öø-ʸˠ-ˤᴀ-ᴥᴬ-ᵜᵢ-ᵥᵫ-ᵷᵹ-ᶾḀ-ỿⁱⁿₐ-ₜKÅℲⅎⅠ-ↈⱠ-ⱿꜢ-ꞇꞋ-ꞭꞰ-ꞷꟷ-ꟿꬰ-ꭚꭜ-ꭤff-stA-Za-z",e.no.trimmer=e.trimmerSupport.generateTrimmer(e.no.wordCharacters),e.Pipeline.registerFunction(e.no.trimmer,"trimmer-no"),e.no.stemmer=function(){var r=e.stemmerSupport.Among,n=e.stemmerSupport.SnowballProgram,i=new function(){function e(){var e,r=w.cursor+3;if(a=w.limit,0<=r||r<=w.limit){for(s=r;;){if(e=w.cursor,w.in_grouping(d,97,248)){w.cursor=e;break}if(e>=w.limit)return;w.cursor=e+1}for(;!w.out_grouping(d,97,248);){if(w.cursor>=w.limit)return;w.cursor++}a=w.cursor,a<s&&(a=s)}}function i(){var e,r,n;if(w.cursor>=a&&(r=w.limit_backward,w.limit_backward=a,w.ket=w.cursor,e=w.find_among_b(m,29),w.limit_backward=r,e))switch(w.bra=w.cursor,e){case 1:w.slice_del();break;case 2:n=w.limit-w.cursor,w.in_grouping_b(c,98,122)?w.slice_del():(w.cursor=w.limit-n,w.eq_s_b(1,"k")&&w.out_grouping_b(d,97,248)&&w.slice_del());break;case 3:w.slice_from("er")}}function t(){var e,r=w.limit-w.cursor;w.cursor>=a&&(e=w.limit_backward,w.limit_backward=a,w.ket=w.cursor,w.find_among_b(u,2)?(w.bra=w.cursor,w.limit_backward=e,w.cursor=w.limit-r,w.cursor>w.limit_backward&&(w.cursor--,w.bra=w.cursor,w.slice_del())):w.limit_backward=e)}function o(){var e,r;w.cursor>=a&&(r=w.limit_backward,w.limit_backward=a,w.ket=w.cursor,e=w.find_among_b(l,11),e?(w.bra=w.cursor,w.limit_backward=r,1==e&&w.slice_del()):w.limit_backward=r)}var s,a,m=[new r("a",-1,1),new r("e",-1,1),new r("ede",1,1),new r("ande",1,1),new r("ende",1,1),new r("ane",1,1),new r("ene",1,1),new r("hetene",6,1),new r("erte",1,3),new r("en",-1,1),new r("heten",9,1),new r("ar",-1,1),new r("er",-1,1),new r("heter",12,1),new r("s",-1,2),new r("as",14,1),new r("es",14,1),new r("edes",16,1),new r("endes",16,1),new r("enes",16,1),new r("hetenes",19,1),new r("ens",14,1),new r("hetens",21,1),new r("ers",14,1),new r("ets",14,1),new r("et",-1,1),new r("het",25,1),new r("ert",-1,3),new r("ast",-1,1)],u=[new r("dt",-1,-1),new r("vt",-1,-1)],l=[new r("leg",-1,1),new r("eleg",0,1),new r("ig",-1,1),new r("eig",2,1),new r("lig",2,1),new r("elig",4,1),new r("els",-1,1),new r("lov",-1,1),new r("elov",7,1),new r("slov",7,1),new r("hetslov",9,1)],d=[17,65,16,1,0,0,0,0,0,0,0,0,0,0,0,0,48,0,128],c=[119,125,149,1],w=new n;this.setCurrent=function(e){w.setCurrent(e)},this.getCurrent=function(){return w.getCurrent()},this.stem=function(){var r=w.cursor;return e(),w.limit_backward=r,w.cursor=w.limit,i(),w.cursor=w.limit,t(),w.cursor=w.limit,o(),!0}};return function(e){return"function"==typeof e.update?e.update(function(e){return i.setCurrent(e),i.stem(),i.getCurrent()}):(i.setCurrent(e),i.stem(),i.getCurrent())}}(),e.Pipeline.registerFunction(e.no.stemmer,"stemmer-no"),e.no.stopWordFilter=e.generateStopWordFilter("alle at av bare begge ble blei bli blir blitt både båe da de deg dei deim deira deires dem den denne der dere deres det dette di din disse ditt du dykk dykkar då eg ein eit eitt eller elles en enn er et ett etter for fordi fra før ha hadde han hans har hennar henne hennes her hjå ho hoe honom hoss hossen hun hva hvem hver hvilke hvilken hvis hvor hvordan hvorfor i ikke ikkje ikkje ingen ingi inkje inn inni ja jeg kan kom korleis korso kun kunne kva kvar kvarhelst kven kvi kvifor man mange me med medan meg meget mellom men mi min mine mitt mot mykje ned no noe noen noka noko nokon nokor nokre nå når og også om opp oss over på samme seg selv si si sia sidan siden sin sine sitt sjøl skal skulle slik so som som somme somt så sånn til um upp ut uten var vart varte ved vere verte vi vil ville vore vors vort vår være være vært å".split(" ")),e.Pipeline.registerFunction(e.no.stopWordFilter,"stopWordFilter-no")}});
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!function(r,t){"function"==typeof define&&define.amd?define(t):"object"==typeof exports?module.exports=t():t()(r.lunr)}(this,function(){return function(r){r.stemmerSupport={Among:function(r,t,i,s){if(this.toCharArray=function(r){for(var t=r.length,i=new Array(t),s=0;s<t;s++)i[s]=r.charCodeAt(s);return i},!r&&""!=r||!t&&0!=t||!i)throw"Bad Among initialisation: s:"+r+", substring_i: "+t+", result: "+i;this.s_size=r.length,this.s=this.toCharArray(r),this.substring_i=t,this.result=i,this.method=s},SnowballProgram:function(){var r;return{bra:0,ket:0,limit:0,cursor:0,limit_backward:0,setCurrent:function(t){r=t,this.cursor=0,this.limit=t.length,this.limit_backward=0,this.bra=this.cursor,this.ket=this.limit},getCurrent:function(){var t=r;return r=null,t},in_grouping:function(t,i,s){if(this.cursor<this.limit){var e=r.charCodeAt(this.cursor);if(e<=s&&e>=i&&(e-=i,t[e>>3]&1<<(7&e)))return this.cursor++,!0}return!1},in_grouping_b:function(t,i,s){if(this.cursor>this.limit_backward){var e=r.charCodeAt(this.cursor-1);if(e<=s&&e>=i&&(e-=i,t[e>>3]&1<<(7&e)))return this.cursor--,!0}return!1},out_grouping:function(t,i,s){if(this.cursor<this.limit){var e=r.charCodeAt(this.cursor);if(e>s||e<i)return this.cursor++,!0;if(e-=i,!(t[e>>3]&1<<(7&e)))return this.cursor++,!0}return!1},out_grouping_b:function(t,i,s){if(this.cursor>this.limit_backward){var e=r.charCodeAt(this.cursor-1);if(e>s||e<i)return this.cursor--,!0;if(e-=i,!(t[e>>3]&1<<(7&e)))return this.cursor--,!0}return!1},eq_s:function(t,i){if(this.limit-this.cursor<t)return!1;for(var s=0;s<t;s++)if(r.charCodeAt(this.cursor+s)!=i.charCodeAt(s))return!1;return this.cursor+=t,!0},eq_s_b:function(t,i){if(this.cursor-this.limit_backward<t)return!1;for(var s=0;s<t;s++)if(r.charCodeAt(this.cursor-t+s)!=i.charCodeAt(s))return!1;return this.cursor-=t,!0},find_among:function(t,i){for(var s=0,e=i,n=this.cursor,u=this.limit,o=0,h=0,c=!1;;){for(var a=s+(e-s>>1),f=0,l=o<h?o:h,_=t[a],m=l;m<_.s_size;m++){if(n+l==u){f=-1;break}if(f=r.charCodeAt(n+l)-_.s[m])break;l++}if(f<0?(e=a,h=l):(s=a,o=l),e-s<=1){if(s>0||e==s||c)break;c=!0}}for(;;){var _=t[s];if(o>=_.s_size){if(this.cursor=n+_.s_size,!_.method)return _.result;var b=_.method();if(this.cursor=n+_.s_size,b)return _.result}if((s=_.substring_i)<0)return 0}},find_among_b:function(t,i){for(var s=0,e=i,n=this.cursor,u=this.limit_backward,o=0,h=0,c=!1;;){for(var a=s+(e-s>>1),f=0,l=o<h?o:h,_=t[a],m=_.s_size-1-l;m>=0;m--){if(n-l==u){f=-1;break}if(f=r.charCodeAt(n-1-l)-_.s[m])break;l++}if(f<0?(e=a,h=l):(s=a,o=l),e-s<=1){if(s>0||e==s||c)break;c=!0}}for(;;){var _=t[s];if(o>=_.s_size){if(this.cursor=n-_.s_size,!_.method)return _.result;var b=_.method();if(this.cursor=n-_.s_size,b)return _.result}if((s=_.substring_i)<0)return 0}},replace_s:function(t,i,s){var e=s.length-(i-t),n=r.substring(0,t),u=r.substring(i);return r=n+s+u,this.limit+=e,this.cursor>=i?this.cursor+=e:this.cursor>t&&(this.cursor=t),e},slice_check:function(){if(this.bra<0||this.bra>this.ket||this.ket>this.limit||this.limit>r.length)throw"faulty slice operation"},slice_from:function(r){this.slice_check(),this.replace_s(this.bra,this.ket,r)},slice_del:function(){this.slice_from("")},insert:function(r,t,i){var s=this.replace_s(r,t,i);r<=this.bra&&(this.bra+=s),r<=this.ket&&(this.ket+=s)},slice_to:function(){return this.slice_check(),r.substring(this.bra,this.ket)},eq_v_b:function(r){return this.eq_s_b(r.length,r)}}}},r.trimmerSupport={generateTrimmer:function(r){var t=new RegExp("^[^"+r+"]+"),i=new RegExp("[^"+r+"]+$");return function(r){return"function"==typeof r.update?r.update(function(r){return r.replace(t,"").replace(i,"")}):r.replace(t,"").replace(i,"")}}}}});
|
|
@ -0,0 +1,18 @@
|
|||
/*!
|
||||
* Lunr languages, `Swedish` language
|
||||
* https://github.com/MihaiValentin/lunr-languages
|
||||
*
|
||||
* Copyright 2014, Mihai Valentin
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
/*!
|
||||
* based on
|
||||
* Snowball JavaScript Library v0.3
|
||||
* http://code.google.com/p/urim/
|
||||
* http://snowball.tartarus.org/
|
||||
*
|
||||
* Copyright 2010, Oleg Mazko
|
||||
* http://www.mozilla.org/MPL/
|
||||
*/
|
||||
|
||||
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RAPIDS
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
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</div>
|
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|
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<ul class="md-nav__list" data-md-scrollfix>
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|
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|
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Home
|
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<label class="md-nav__link" for="nav-2">
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Setup
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<span class="md-nav__icon md-icon"></span>
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<label class="md-nav__title" for="nav-2">
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<span class="md-nav__icon md-icon"></span>
|
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Setup
|
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
|
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<a href="../../file-structure/" class="md-nav__link">
|
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File Structure
|
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|
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<a href="../../setup/installation/" class="md-nav__link">
|
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Installation
|
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|
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<a href="../../setup/configuration/" class="md-nav__link">
|
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Initial Configuration
|
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|
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|
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Execution
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
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Example Workflows
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<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
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<span class="md-nav__icon md-icon"></span>
|
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Example Workflows
|
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</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
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|
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<a href="../../workflow-examples/minimal/" class="md-nav__link">
|
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Minimal
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||||
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||||
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||||
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||||
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
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<label class="md-nav__link" for="nav-4">
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Behavioral Features
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<span class="md-nav__icon md-icon"></span>
|
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<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
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<span class="md-nav__icon md-icon"></span>
|
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Behavioral Features
|
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</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
|
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||||
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||||
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||||
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||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
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|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
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|
||||
|
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|
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|
||||
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|
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Developers
|
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|
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|
||||
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|
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|
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|
||||
Developers
|
||||
</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
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|
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||||
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||||
|
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||||
<li class="md-nav__item md-nav__item--active">
|
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|
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<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
||||
|
||||
|
||||
|
||||
|
||||
<a href="./" class="md-nav__link md-nav__link--active">
|
||||
Remote Support
|
||||
</a>
|
||||
|
||||
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../virtual-environments/" class="md-nav__link">
|
||||
Virtual Environments
|
||||
</a>
|
||||
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../documentation/" class="md-nav__link">
|
||||
Documentation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../testing/" class="md-nav__link">
|
||||
Testing
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../test-cases/" class="md-nav__link">
|
||||
Test cases
|
||||
</a>
|
||||
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|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
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||||
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||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-6" type="checkbox" id="nav-6" >
|
||||
|
||||
<label class="md-nav__link" for="nav-6">
|
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Others
|
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|
||||
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|
||||
<nav class="md-nav" aria-label="Others" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-6">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Others
|
||||
</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
|
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||||
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||||
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||||
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||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../faq/" class="md-nav__link">
|
||||
Frequently Asked Questions
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../team/" class="md-nav__link">
|
||||
Team
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../citation/" class="md-nav__link">
|
||||
Citation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--secondary" data-md-component="toc" >
|
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<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
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||||
|
||||
|
||||
|
||||
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-content">
|
||||
<article class="md-content__inner md-typeset">
|
||||
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/edit/master/docs/developers/remote-support.md" title="Edit this page" class="md-content__button md-icon">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20.71 7.04c.39-.39.39-1.04 0-1.41l-2.34-2.34c-.37-.39-1.02-.39-1.41 0l-1.84 1.83 3.75 3.75M3 17.25V21h3.75L17.81 9.93l-3.75-3.75L3 17.25z"/></svg>
|
||||
</a>
|
||||
|
||||
|
||||
<h1 id="remote-support">Remote Support<a class="headerlink" href="#remote-support" title="Permanent link">¶</a></h1>
|
||||
<p>We use the Live Share extension of Visual Studio Code to debug bugs when sharing data or database credentials is not possible.</p>
|
||||
<ol>
|
||||
<li>Install <a href="https://code.visualstudio.com/">Visual Studio Code</a></li>
|
||||
<li>Open you RAPIDS root folder in a new VSCode window</li>
|
||||
<li>Open a new Terminal <code>Terminal > New terminal</code></li>
|
||||
<li>Install the <a href="https://marketplace.visualstudio.com/items?itemName=MS-vsliveshare.vsliveshare-pack">Live Share extension pack</a></li>
|
||||
<li>
|
||||
<p>Press <span class="keys"><kbd class="key-control">Ctrl</kbd><span>+</span><kbd class="key-p">P</kbd></span> or <span class="keys"><kbd class="key-command">Cmd</kbd><span>+</span><kbd class="key-p">P</kbd></span> and run this command:</p>
|
||||
<p><div class="highlight"><pre><span></span><code>>live share: start collaboration session
|
||||
</code></pre></div>
|
||||
6. Follow the instructions and share the session link you receive</p>
|
||||
</li>
|
||||
</ol>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</article>
|
||||
</div>
|
||||
</div>
|
||||
</main>
|
||||
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||||
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||||
<footer class="md-footer">
|
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||||
<div class="md-footer-nav">
|
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<nav class="md-footer-nav__inner md-grid" aria-label="Footer">
|
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RAPIDS
|
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|
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
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|
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|
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|
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|
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|
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|
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<li class="md-nav__item">
|
||||
<a href="../.." class="md-nav__link">
|
||||
Home
|
||||
</a>
|
||||
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|
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|
||||
|
||||
|
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|
||||
|
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|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
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|
||||
|
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" >
|
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|
||||
<label class="md-nav__link" for="nav-2">
|
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Setup
|
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
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<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Setup
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
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|
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|
||||
|
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||||
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||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../file-structure/" class="md-nav__link">
|
||||
File Structure
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../setup/installation/" class="md-nav__link">
|
||||
Installation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../setup/configuration/" class="md-nav__link">
|
||||
Initial Configuration
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../setup/execution/" class="md-nav__link">
|
||||
Execution
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
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</li>
|
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|
||||
|
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|
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|
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|
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|
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|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
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|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
|
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|
||||
<label class="md-nav__link" for="nav-3">
|
||||
Example Workflows
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-3">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../workflow-examples/minimal/" class="md-nav__link">
|
||||
Minimal
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4">
|
||||
Behavioral Features
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-4">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-5" type="checkbox" id="nav-5" checked>
|
||||
|
||||
<label class="md-nav__link" for="nav-5">
|
||||
Developers
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Developers" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-5">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Developers
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../remote-support/" class="md-nav__link">
|
||||
Remote Support
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../virtual-environments/" class="md-nav__link">
|
||||
Virtual Environments
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../documentation/" class="md-nav__link">
|
||||
Documentation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active">
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
||||
|
||||
|
||||
|
||||
|
||||
<label class="md-nav__link md-nav__link--active" for="__toc">
|
||||
Testing
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
|
||||
<a href="./" class="md-nav__link md-nav__link--active">
|
||||
Testing
|
||||
</a>
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<label class="md-nav__title" for="__toc">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Table of contents
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#steps-for-testing" class="md-nav__link">
|
||||
Steps for Testing
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
</ul>
|
||||
|
||||
</nav>
|
||||
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../test-cases/" class="md-nav__link">
|
||||
Test cases
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-6" type="checkbox" id="nav-6" >
|
||||
|
||||
<label class="md-nav__link" for="nav-6">
|
||||
Others
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Others" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-6">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Others
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../faq/" class="md-nav__link">
|
||||
Frequently Asked Questions
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../team/" class="md-nav__link">
|
||||
Team
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../citation/" class="md-nav__link">
|
||||
Citation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--secondary" data-md-component="toc" >
|
||||
<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<label class="md-nav__title" for="__toc">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Table of contents
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#steps-for-testing" class="md-nav__link">
|
||||
Steps for Testing
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
</ul>
|
||||
|
||||
</nav>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-content">
|
||||
<article class="md-content__inner md-typeset">
|
||||
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/edit/master/docs/developers/testing.md" title="Edit this page" class="md-content__button md-icon">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20.71 7.04c.39-.39.39-1.04 0-1.41l-2.34-2.34c-.37-.39-1.02-.39-1.41 0l-1.84 1.83 3.75 3.75M3 17.25V21h3.75L17.81 9.93l-3.75-3.75L3 17.25z"/></svg>
|
||||
</a>
|
||||
|
||||
|
||||
<h1 id="testing">Testing<a class="headerlink" href="#testing" title="Permanent link">¶</a></h1>
|
||||
<p>The following is a simple guide to testing RAPIDS. All files necessary for testing are stored in the <code>/tests</code> directory</p>
|
||||
<h2 id="steps-for-testing">Steps for Testing<a class="headerlink" href="#steps-for-testing" title="Permanent link">¶</a></h2>
|
||||
<ol>
|
||||
<li>To begin testing RAPIDS place the fake raw input data <code>csv</code> files in
|
||||
<code>tests/data/raw/</code>. The fake participant files should be placed in
|
||||
<code>tests/data/external/</code>. The expected output files of RAPIDS after
|
||||
processing the input data should be placed in
|
||||
<code>tests/data/processesd/</code>.</li>
|
||||
<li>The Snakemake rule(s) that are to be tested must be placed in the
|
||||
<code>tests/Snakemake</code> file. The current <code>tests/Snakemake</code> is a good
|
||||
example of how to define them. (At the time of writing this
|
||||
documentation the snakefile contains rules messages (SMS), calls and
|
||||
screen)</li>
|
||||
<li>Edit the <code>tests/settings/config.yaml</code>. Add and/or remove the rules
|
||||
to be run for testing from the <code>forcerun</code> list.</li>
|
||||
<li>Edit the <code>tests/settings/testing_config.yaml</code> with the necessary
|
||||
configuration settings for running the rules to be tested.</li>
|
||||
<li>Add any additional testscripts in <code>tests/scripts</code>.</li>
|
||||
<li>Uncomment or comment off lines in the testing shell script
|
||||
<code>tests/scripts/run_tests.sh</code>.</li>
|
||||
<li>
|
||||
<p>Run the testing shell script.</p>
|
||||
<div class="highlight"><pre><span></span><code>tests/scripts/run_tests.sh
|
||||
</code></pre></div>
|
||||
</li>
|
||||
</ol>
|
||||
<p>The following is a snippet of the output you should see after running your test.</p>
|
||||
<div class="highlight"><pre><span></span><code>test_sensors_files_exist <span class="o">(</span>test_sensor_features.TestSensorFeatures<span class="o">)</span> ... ok
|
||||
test_sensors_features_calculations <span class="o">(</span>test_sensor_features.TestSensorFeatures<span class="o">)</span> ... <span class="nv">FAIL</span>
|
||||
|
||||
<span class="o">======================================================================</span>
|
||||
FAIL: test_sensors_features_calculations <span class="o">(</span>test_sensor_features.TestSensorFeatures<span class="o">)</span>
|
||||
----------------------------------------------------------------------
|
||||
</code></pre></div>
|
||||
<p>The results above show that the first test <code>test_sensors_files_exist</code> passed while <code>test_sensors_features_calculations</code> failed. In addition you should get the traceback of the failure (not shown here). For more information on how to implement test scripts and use unittest please see <a href="https://docs.python.org/3.7/library/unittest.html#command-line-interface">Unittest Documentation</a></p>
|
||||
<p>Testing of the RAPIDS sensors and features is a work-in-progress. Please see <code class="interpreted-text" role="ref">test-cases</code> for a list of sensors and features that have testing currently available.</p>
|
||||
<p>Currently the repository is set up to test a number of sensors out of the box by simply running the <code>tests/scripts/run_tests.sh</code> command once the RAPIDS python environment is active.</p>
|
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|
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<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
|
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<div class="md-sidebar__scrollwrap">
|
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<div class="md-sidebar__inner">
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<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
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<label class="md-nav__title" for="__drawer">
|
||||
<a href="../.." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
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|
||||
</a>
|
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RAPIDS
|
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</label>
|
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|
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<div class="md-nav__source">
|
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|
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<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
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<div class="md-source__icon md-icon">
|
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|
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
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</div>
|
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</a>
|
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</div>
|
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|
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
|
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<a href="../.." class="md-nav__link">
|
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Home
|
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</a>
|
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</li>
|
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" >
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<label class="md-nav__link" for="nav-2">
|
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Setup
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
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<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
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<label class="md-nav__title" for="nav-2">
|
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<span class="md-nav__icon md-icon"></span>
|
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Setup
|
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</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
|
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|
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|
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<li class="md-nav__item">
|
||||
<a href="../../file-structure/" class="md-nav__link">
|
||||
File Structure
|
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</a>
|
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|
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|
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|
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|
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|
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|
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|
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<li class="md-nav__item">
|
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<a href="../../setup/installation/" class="md-nav__link">
|
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Installation
|
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</a>
|
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</li>
|
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|
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|
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|
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|
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|
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|
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|
||||
<li class="md-nav__item">
|
||||
<a href="../../setup/configuration/" class="md-nav__link">
|
||||
Initial Configuration
|
||||
</a>
|
||||
</li>
|
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|
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|
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|
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|
||||
|
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|
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|
||||
<li class="md-nav__item">
|
||||
<a href="../../setup/execution/" class="md-nav__link">
|
||||
Execution
|
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</a>
|
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</li>
|
||||
|
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|
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</ul>
|
||||
</nav>
|
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</li>
|
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|
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
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|
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<label class="md-nav__link" for="nav-3">
|
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Example Workflows
|
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
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<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
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<label class="md-nav__title" for="nav-3">
|
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<span class="md-nav__icon md-icon"></span>
|
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Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
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|
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|
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|
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|
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|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../workflow-examples/minimal/" class="md-nav__link">
|
||||
Minimal
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
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|
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|
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|
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|
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
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|
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<label class="md-nav__link" for="nav-4">
|
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Behavioral Features
|
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<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
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<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
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<label class="md-nav__title" for="nav-4">
|
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<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
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|
||||
|
||||
|
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|
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|
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<li class="md-nav__item md-nav__item--nested">
|
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|
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
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|
||||
<label class="md-nav__link" for="nav-4-2">
|
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Phone
|
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
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<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
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|
||||
|
||||
|
||||
|
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|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
|
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|
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|
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-5" type="checkbox" id="nav-5" checked>
|
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|
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<label class="md-nav__link" for="nav-5">
|
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Developers
|
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
||||
<nav class="md-nav" aria-label="Developers" data-md-level="1">
|
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<label class="md-nav__title" for="nav-5">
|
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<span class="md-nav__icon md-icon"></span>
|
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Developers
|
||||
</label>
|
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<ul class="md-nav__list" data-md-scrollfix>
|
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|
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../remote-support/" class="md-nav__link">
|
||||
Remote Support
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
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|
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<li class="md-nav__item md-nav__item--active">
|
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|
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<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
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|
||||
|
||||
|
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|
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<label class="md-nav__link md-nav__link--active" for="__toc">
|
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Virtual Environments
|
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<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
|
||||
<a href="./" class="md-nav__link md-nav__link--active">
|
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Virtual Environments
|
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</a>
|
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|
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|
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<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
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|
||||
|
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|
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|
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|
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<label class="md-nav__title" for="__toc">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Table of contents
|
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</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#add-new-packages" class="md-nav__link">
|
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Add new packages
|
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</a>
|
||||
|
||||
</li>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#update-your-conda-environmentyaml" class="md-nav__link">
|
||||
Update your conda environment.yaml
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#update-and-prune-your-conda-environment-from-a-environmentyaml-file" class="md-nav__link">
|
||||
Update and prune your conda environment from a environment.yaml file
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
</ul>
|
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|
||||
</nav>
|
||||
|
||||
</li>
|
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|
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|
||||
|
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|
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|
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|
||||
|
||||
<li class="md-nav__item">
|
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<a href="../documentation/" class="md-nav__link">
|
||||
Documentation
|
||||
</a>
|
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</li>
|
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|
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|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../testing/" class="md-nav__link">
|
||||
Testing
|
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</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../test-cases/" class="md-nav__link">
|
||||
Test cases
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
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|
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|
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|
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|
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|
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|
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|
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="nav-6" type="checkbox" id="nav-6" >
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|
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<label class="md-nav__link" for="nav-6">
|
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Others
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<span class="md-nav__icon md-icon"></span>
|
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</label>
|
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<nav class="md-nav" aria-label="Others" data-md-level="1">
|
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<label class="md-nav__title" for="nav-6">
|
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<span class="md-nav__icon md-icon"></span>
|
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Others
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</label>
|
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<h1 id="virtual-environments">Virtual Environments<a class="headerlink" href="#virtual-environments" title="Permanent link">¶</a></h1>
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<h2 id="add-new-packages">Add new packages<a class="headerlink" href="#add-new-packages" title="Permanent link">¶</a></h2>
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<h2 id="update-your-conda-environmentyaml">Update your conda <code>environment.yaml</code><a class="headerlink" href="#update-your-conda-environmentyaml" title="Permanent link">¶</a></h2>
|
||||
<p>After installing a new package you can use the following command in your terminal to update your <code>environment.yaml</code> before publishing your pipeline. Note that we ignore the package version for <code>libfortran</code> to keep compatibility with Linux:</p>
|
||||
<div class="highlight"><pre><span></span><code>conda env <span class="nb">export</span> --no-builds <span class="p">|</span> sed <span class="s1">'s/^.*libgfortran.*$/ - libgfortran/'</span> > environment.yml
|
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|
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|
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|
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
|
||||
</label>
|
||||
<button type="reset" class="md-search__icon md-icon" aria-label="Clear" data-md-component="search-reset" tabindex="-1">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 6.41L17.59 5 12 10.59 6.41 5 5 6.41 10.59 12 5 17.59 6.41 19 12 13.41 17.59 19 19 17.59 13.41 12 19 6.41z"/></svg>
|
||||
</button>
|
||||
<div class="md-search__suggest" data-md-component="search-suggest"></div>
|
||||
</form>
|
||||
<div class="md-search__output">
|
||||
<div class="md-search__scrollwrap" data-md-scrollfix>
|
||||
<div class="md-search-result" data-md-component="search-result">
|
||||
<div class="md-search-result__meta">
|
||||
Initializing search
|
||||
</div>
|
||||
<ol class="md-search-result__list"></ol>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-header-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
</nav>
|
||||
</header>
|
||||
|
||||
<div class="md-container" data-md-component="container">
|
||||
|
||||
|
||||
|
||||
|
||||
<main class="md-main" data-md-component="main">
|
||||
<div class="md-main__inner md-grid">
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
|
||||
<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
||||
<label class="md-nav__title" for="__drawer">
|
||||
<a href=".." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
RAPIDS
|
||||
</label>
|
||||
|
||||
<div class="md-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href=".." class="md-nav__link">
|
||||
Home
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" checked>
|
||||
|
||||
<label class="md-nav__link" for="nav-2">
|
||||
Setup
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Setup
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active">
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
||||
|
||||
|
||||
|
||||
|
||||
<a href="./" class="md-nav__link md-nav__link--active">
|
||||
File Structure
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../setup/installation/" class="md-nav__link">
|
||||
Installation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../setup/configuration/" class="md-nav__link">
|
||||
Initial Configuration
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../setup/execution/" class="md-nav__link">
|
||||
Execution
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
|
||||
|
||||
<label class="md-nav__link" for="nav-3">
|
||||
Example Workflows
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-3">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../workflow-examples/minimal/" class="md-nav__link">
|
||||
Minimal
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4">
|
||||
Behavioral Features
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-4">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-5" type="checkbox" id="nav-5" >
|
||||
|
||||
<label class="md-nav__link" for="nav-5">
|
||||
Developers
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Developers" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-5">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Developers
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../developers/remote-support/" class="md-nav__link">
|
||||
Remote Support
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../developers/virtual-environments/" class="md-nav__link">
|
||||
Virtual Environments
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
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<h1 id="file-structure">File Structure<a class="headerlink" href="#file-structure" title="Permanent link">¶</a></h1>
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<p>If you want to extract the behavioral features that RAPIDS offers, you will only have to create or modify the <a href="../setup/configuration/#database-credentials"><code>.env</code> file</a>, <a href="../setup/configuration/#participant-files">participants files</a>, <a href="../setup/configuration/#day-segments">day segment files</a>, and the <code>config.yaml</code> file. The <code>config.yaml</code> file is the heart of RAPIDS and includes parameters to manage participants, data sources, sensor data, visualizations and more.</p>
|
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<p>All data is saved in <code>data/</code>. The <code>data/external/</code> folder stores any data imported or created by the user, <code>data/raw/</code> stores sensor data as imported from your database, <code>data/interim/</code> has intermediate files necessary to compute behavioral features from raw data, and <code>data/processed/</code> has all the final files with the behavioral features in folders per participant and sensor.</p>
|
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<p>All the source code is saved in <code>src/</code>. The <code>src/data/</code> folder stores scripts to download, clean and pre-process sensor data, <code>src/features</code> has scripts to extract behavioral features organized in their respective subfolders , <code>src/models/</code> can host any script to create models or statistical analyses with the behavioral features you extract, and <code>src/visualization/</code> has scripts to create plots of the raw and processed data.</p>
|
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<p>There are other important files and folders but only relevant if you are interested in extending RAPIDS (e.g. virtual env files, docs, tests, Dockerfile, the Snakefile, etc.). In the figure below, we represent the interactions between users and files. After a user modifies <code>config.yaml</code> and <code>.env</code> the <code>Snakefile</code> file will decide what Snakemake rules have to be executed to produce the required output files (behavioral features) and what scripts are in charge of producing such files. In addition, users can add or modifiy files in the <code>data</code> folder (for example to configure the <a href="../setup/configuration/#participant-files">participants files</a> or the <a href="../setup/configuration/#day-segments">day segment files</a>).</p>
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|
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<div class="md-search__inner" role="search">
|
||||
<form class="md-search__form" name="search">
|
||||
<input type="text" class="md-search__input" name="query" aria-label="Search" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false" data-md-component="search-query" data-md-state="active">
|
||||
<label class="md-search__icon md-icon" for="__search">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
|
||||
</label>
|
||||
<button type="reset" class="md-search__icon md-icon" aria-label="Clear" data-md-component="search-reset" tabindex="-1">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 6.41L17.59 5 12 10.59 6.41 5 5 6.41 10.59 12 5 17.59 6.41 19 12 13.41 17.59 19 19 17.59 13.41 12 19 6.41z"/></svg>
|
||||
</button>
|
||||
<div class="md-search__suggest" data-md-component="search-suggest"></div>
|
||||
</form>
|
||||
<div class="md-search__output">
|
||||
<div class="md-search__scrollwrap" data-md-scrollfix>
|
||||
<div class="md-search-result" data-md-component="search-result">
|
||||
<div class="md-search-result__meta">
|
||||
Initializing search
|
||||
</div>
|
||||
<ol class="md-search-result__list"></ol>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-header-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
</nav>
|
||||
</header>
|
||||
|
||||
<div class="md-container" data-md-component="container">
|
||||
|
||||
|
||||
|
||||
|
||||
<main class="md-main" data-md-component="main">
|
||||
<div class="md-main__inner md-grid">
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
|
||||
<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
||||
<label class="md-nav__title" for="__drawer">
|
||||
<a href="." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
RAPIDS
|
||||
</label>
|
||||
|
||||
<div class="md-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active">
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
||||
|
||||
|
||||
|
||||
|
||||
<label class="md-nav__link md-nav__link--active" for="__toc">
|
||||
Home
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
|
||||
<a href="." class="md-nav__link md-nav__link--active">
|
||||
Home
|
||||
</a>
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<label class="md-nav__title" for="__toc">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Table of contents
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#how-does-it-work" class="md-nav__link">
|
||||
How does it work?
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#what-are-the-benefits-of-using-rapids" class="md-nav__link">
|
||||
What are the benefits of using RAPIDS?
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="#how-is-it-organized" class="md-nav__link">
|
||||
How is it organized?
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
</ul>
|
||||
|
||||
</nav>
|
||||
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-2">
|
||||
Setup
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Setup
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="file-structure/" class="md-nav__link">
|
||||
File Structure
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="setup/installation/" class="md-nav__link">
|
||||
Installation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="setup/configuration/" class="md-nav__link">
|
||||
Initial Configuration
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="setup/execution/" class="md-nav__link">
|
||||
Execution
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
|
||||
|
||||
<label class="md-nav__link" for="nav-3">
|
||||
Example Workflows
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-3">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="workflow-examples/minimal/" class="md-nav__link">
|
||||
Minimal
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4">
|
||||
Behavioral Features
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-4">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-accelerometer/" class="md-nav__link">
|
||||
Phone Accelerometer
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-activity-recognition/" class="md-nav__link">
|
||||
Phone Activity Recognition
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-applications-foreground/" class="md-nav__link">
|
||||
Phone Applications Foreground
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-battery/" class="md-nav__link">
|
||||
Phone Battery
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-bluetooth/" class="md-nav__link">
|
||||
Phone Bluetooth
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-calls/" class="md-nav__link">
|
||||
Phone Calls
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-conversation/" class="md-nav__link">
|
||||
Phone Conversation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-light/" class="md-nav__link">
|
||||
Phone Light
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-locations/" class="md-nav__link">
|
||||
Phone Locations
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-messages/" class="md-nav__link">
|
||||
Phone Messages
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-screen/" class="md-nav__link">
|
||||
Phone Screen
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-wifi-connected/" class="md-nav__link">
|
||||
Phone WiFI Connected
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/phone-wifi-visible/" class="md-nav__link">
|
||||
Phone WiFI Visible
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="features/add-new-features/" class="md-nav__link">
|
||||
Add New Features
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20.71 7.04c.39-.39.39-1.04 0-1.41l-2.34-2.34c-.37-.39-1.02-.39-1.41 0l-1.84 1.83 3.75 3.75M3 17.25V21h3.75L17.81 9.93l-3.75-3.75L3 17.25z"/></svg>
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<h1 id="welcome-to-rapids-documentation">Welcome to RAPIDS documentation<a class="headerlink" href="#welcome-to-rapids-documentation" title="Permanent link">¶</a></h1>
|
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<p>Reproducible Analysis Pipeline for Data Streams (RAPIDS) allows you to process smartphone and wearable data to extract <strong>behavioral features</strong> (a.k.a. digital biomarkers/phenotypes).</p>
|
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<p>RAPIDS is open source, documented, modular, tested, and reproducible. At the moment we support smartphone data collected with <a href="https://awareframework.com/">AWARE</a> and wearable data from Fitbit devices.</p>
|
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<p><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M6 15a2 2 0 01-2 2 2 2 0 01-2-2 2 2 0 012-2h2v2m1 0a2 2 0 012-2 2 2 0 012 2v5a2 2 0 01-2 2 2 2 0 01-2-2v-5m2-8a2 2 0 01-2-2 2 2 0 012-2 2 2 0 012 2v2H9m0 1a2 2 0 012 2 2 2 0 01-2 2H4a2 2 0 01-2-2 2 2 0 012-2h5m8 2a2 2 0 012-2 2 2 0 012 2 2 2 0 01-2 2h-2v-2m-1 0a2 2 0 01-2 2 2 2 0 01-2-2V5a2 2 0 012-2 2 2 0 012 2v5m-2 8a2 2 0 012 2 2 2 0 01-2 2 2 2 0 01-2-2v-2h2m0-1a2 2 0 01-2-2 2 2 0 012-2h5a2 2 0 012 2 2 2 0 01-2 2h-5z"/></svg></span> Questions or feedback can be posted on #rapids in AWARE Framework's <a href="http://awareframework.com:3000/">slack</a>. </p>
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<p><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M12 2A10 10 0 002 12c0 4.42 2.87 8.17 6.84 9.5.5.08.66-.23.66-.5v-1.69c-2.77.6-3.36-1.34-3.36-1.34-.46-1.16-1.11-1.47-1.11-1.47-.91-.62.07-.6.07-.6 1 .07 1.53 1.03 1.53 1.03.87 1.52 2.34 1.07 2.91.83.09-.65.35-1.09.63-1.34-2.22-.25-4.55-1.11-4.55-4.92 0-1.11.38-2 1.03-2.71-.1-.25-.45-1.29.1-2.64 0 0 .84-.27 2.75 1.02.79-.22 1.65-.33 2.5-.33.85 0 1.71.11 2.5.33 1.91-1.29 2.75-1.02 2.75-1.02.55 1.35.2 2.39.1 2.64.65.71 1.03 1.6 1.03 2.71 0 3.82-2.34 4.66-4.57 4.91.36.31.69.92.69 1.85V21c0 .27.16.59.67.5C19.14 20.16 22 16.42 22 12A10 10 0 0012 2z"/></svg></span> Bugs should be reported on <a href="https://github.com/carissalow/rapids/issues">Github</a>. </p>
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<p><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M139.61 35.5a12 12 0 00-17 0L58.93 98.81l-22.7-22.12a12 12 0 00-17 0L3.53 92.41a12 12 0 000 17l47.59 47.4a12.78 12.78 0 0017.61 0l15.59-15.62L156.52 69a12.09 12.09 0 00.09-17zm0 159.19a12 12 0 00-17 0l-63.68 63.72-22.7-22.1a12 12 0 00-17 0L3.53 252a12 12 0 000 17L51 316.5a12.77 12.77 0 0017.6 0l15.7-15.69 72.2-72.22a12 12 0 00.09-16.9zM64 368c-26.49 0-48.59 21.5-48.59 48S37.53 464 64 464a48 48 0 000-96zm432 16H208a16 16 0 00-16 16v32a16 16 0 0016 16h288a16 16 0 0016-16v-32a16 16 0 00-16-16zm0-320H208a16 16 0 00-16 16v32a16 16 0 0016 16h288a16 16 0 0016-16V80a16 16 0 00-16-16zm0 160H208a16 16 0 00-16 16v32a16 16 0 0016 16h288a16 16 0 0016-16v-32a16 16 0 00-16-16z"/></svg></span> Join our discussions on our algorithms and assumptions for feature <a href="https://github.com/carissalow/rapids/issues?q=is%3Aissue+is%3Aopen+label%3Adiscussion">processing</a>.</p>
|
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<p><span class="twemoji"><svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M424.4 214.7L72.4 6.6C43.8-10.3 0 6.1 0 47.9V464c0 37.5 40.7 60.1 72.4 41.3l352-208c31.4-18.5 31.5-64.1 0-82.6z"/></svg></span> Ready to start? Go to <a href="setup/installation/">Installation</a> and then to <a href="setup/configuration/">Initial Configuration</a></p>
|
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<h2 id="how-does-it-work">How does it work?<a class="headerlink" href="#how-does-it-work" title="Permanent link">¶</a></h2>
|
||||
<p>RAPIDS is formed by R and Python scripts orchestrated by <a href="https://snakemake.readthedocs.io/en/stable/">Snakemake</a>. We suggest you read Snakemake’s docs but in short: every link in the analysis chain is atomic and has files as input and output. Behavioral features are processed per sensor and per participant.</p>
|
||||
<h2 id="what-are-the-benefits-of-using-rapids">What are the benefits of using RAPIDS?<a class="headerlink" href="#what-are-the-benefits-of-using-rapids" title="Permanent link">¶</a></h2>
|
||||
<ol>
|
||||
<li><strong>Consistent analysis</strong>. Every participant sensor dataset is analyzed in the exact same way and isolated from each other.</li>
|
||||
<li><strong>Efficient analysis</strong>. Every analysis step is executed only once. Whenever your data or configuration changes only the affected files are updated.</li>
|
||||
<li><strong>Parallel execution</strong>. Thanks to Snakemake, your analysis can be executed over multiple cores without changing your code.</li>
|
||||
<li><strong>Extensible code</strong>. You can easily add your own behavioral features in R or Python and keep authorship and citations.</li>
|
||||
<li><strong>Timezone aware</strong>. Your data is adjusted to the specified timezone (multiple timezones suport <em>coming soon</em>).</li>
|
||||
<li><strong>Flexible day segments</strong>. You can extract behavioral features on time windows of any length (e.g. 5 minutes, 3 hours, 2 days), on every day or particular days (e.g. weekends, Mondays, the 1<sup>st</sup> of each month, etc.) or around events of interest (e.g. surveys or clinical relapses).</li>
|
||||
<li><strong>Tested code</strong>. We are constantly adding tests to make sure our behavioral features are correct.</li>
|
||||
<li><strong>Reproducible code</strong>. You can be sure your code will run in other computers as intended thanks to R and Python virtual environments. You can share your analysis code along your publications without any overhead.</li>
|
||||
<li><strong>Private</strong>. All your data is processed locally.</li>
|
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</ol>
|
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<h2 id="how-is-it-organized">How is it organized?<a class="headerlink" href="#how-is-it-organized" title="Permanent link">¶</a></h2>
|
||||
<p>In broad terms the <code>config.yaml</code>, <code>.env</code> files, participant files, and day segment files are the only ones that you will have to modify. All data is stored in <code>data/</code> and all scripts are stored in <code>src/</code>. For more information see RAPIDS’ <a href="file-structure/">File Structure</a>.</p>
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<body dir="ltr" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue">
|
||||
|
||||
|
||||
<script>var palette=JSON.parse(localStorage.getItem("__palette")||"{}");if(void 0!==palette.color)for(var key in palette.color)document.body.setAttribute("data-md-color-"+key,palette.color[key])</script>
|
||||
|
||||
<input class="md-toggle" data-md-toggle="drawer" type="checkbox" id="__drawer" autocomplete="off">
|
||||
<input class="md-toggle" data-md-toggle="search" type="checkbox" id="__search" autocomplete="off">
|
||||
<label class="md-overlay" for="__drawer"></label>
|
||||
<div data-md-component="skip">
|
||||
|
||||
|
||||
<a href="#execution" class="md-skip">
|
||||
Skip to content
|
||||
</a>
|
||||
|
||||
</div>
|
||||
<div data-md-component="announce">
|
||||
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
<header class="md-header" data-md-component="header">
|
||||
<nav class="md-header-nav md-grid" aria-label="Header">
|
||||
<a href="../.." title="RAPIDS" class="md-header-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
<label class="md-header-nav__button md-icon" for="__drawer">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M3 6h18v2H3V6m0 5h18v2H3v-2m0 5h18v2H3v-2z"/></svg>
|
||||
</label>
|
||||
<div class="md-header-nav__title" data-md-component="header-title">
|
||||
<div class="md-header-nav__ellipsis">
|
||||
<div class="md-header-nav__topic">
|
||||
<span class="md-ellipsis">
|
||||
RAPIDS
|
||||
</span>
|
||||
</div>
|
||||
<div class="md-header-nav__topic" data-md-component="header-topic">
|
||||
<span class="md-ellipsis">
|
||||
|
||||
Execution
|
||||
|
||||
</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
<div class="md-header-nav__options">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<button class="md-header-nav__button md-icon" title="Switch to light mode" aria-label="Switch to light mode" data-md-option="palette" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M17 7H7a5 5 0 00-5 5 5 5 0 005 5h10a5 5 0 005-5 5 5 0 00-5-5m0 8a3 3 0 01-3-3 3 3 0 013-3 3 3 0 013 3 3 3 0 01-3 3z"/></svg>
|
||||
</button>
|
||||
|
||||
|
||||
|
||||
|
||||
<button class="md-header-nav__button md-icon" title="Switch to dark mode" aria-label="Switch to dark mode" data-md-option="palette" data-md-color-scheme="slate" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M7 10a2 2 0 012 2 2 2 0 01-2 2 2 2 0 01-2-2 2 2 0 012-2m10-3a5 5 0 015 5 5 5 0 01-5 5H7a5 5 0 01-5-5 5 5 0 015-5h10M7 9a3 3 0 00-3 3 3 3 0 003 3h10a3 3 0 003-3 3 3 0 00-3-3H7z"/></svg>
|
||||
</button>
|
||||
|
||||
|
||||
</div>
|
||||
|
||||
<label class="md-header-nav__button md-icon" for="__search">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
</label>
|
||||
|
||||
<div class="md-search" data-md-component="search" role="dialog">
|
||||
<label class="md-search__overlay" for="__search"></label>
|
||||
<div class="md-search__inner" role="search">
|
||||
<form class="md-search__form" name="search">
|
||||
<input type="text" class="md-search__input" name="query" aria-label="Search" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false" data-md-component="search-query" data-md-state="active">
|
||||
<label class="md-search__icon md-icon" for="__search">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
|
||||
</label>
|
||||
<button type="reset" class="md-search__icon md-icon" aria-label="Clear" data-md-component="search-reset" tabindex="-1">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 6.41L17.59 5 12 10.59 6.41 5 5 6.41 10.59 12 5 17.59 6.41 19 12 13.41 17.59 19 19 17.59 13.41 12 19 6.41z"/></svg>
|
||||
</button>
|
||||
<div class="md-search__suggest" data-md-component="search-suggest"></div>
|
||||
</form>
|
||||
<div class="md-search__output">
|
||||
<div class="md-search__scrollwrap" data-md-scrollfix>
|
||||
<div class="md-search-result" data-md-component="search-result">
|
||||
<div class="md-search-result__meta">
|
||||
Initializing search
|
||||
</div>
|
||||
<ol class="md-search-result__list"></ol>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-header-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
</nav>
|
||||
</header>
|
||||
|
||||
<div class="md-container" data-md-component="container">
|
||||
|
||||
|
||||
|
||||
|
||||
<main class="md-main" data-md-component="main">
|
||||
<div class="md-main__inner md-grid">
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
|
||||
<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
||||
<label class="md-nav__title" for="__drawer">
|
||||
<a href="../.." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
RAPIDS
|
||||
</label>
|
||||
|
||||
<div class="md-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../.." class="md-nav__link">
|
||||
Home
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-2" type="checkbox" id="nav-2" checked>
|
||||
|
||||
<label class="md-nav__link" for="nav-2">
|
||||
Setup
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Setup
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../file-structure/" class="md-nav__link">
|
||||
File Structure
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../installation/" class="md-nav__link">
|
||||
Installation
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../configuration/" class="md-nav__link">
|
||||
Initial Configuration
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--active">
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
||||
|
||||
|
||||
|
||||
|
||||
<a href="./" class="md-nav__link md-nav__link--active">
|
||||
Execution
|
||||
</a>
|
||||
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-3" type="checkbox" id="nav-3" >
|
||||
|
||||
<label class="md-nav__link" for="nav-3">
|
||||
Example Workflows
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Example Workflows" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-3">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Example Workflows
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../workflow-examples/minimal/" class="md-nav__link">
|
||||
Minimal
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
</ul>
|
||||
</nav>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4" type="checkbox" id="nav-4" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4">
|
||||
Behavioral Features
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||||
<label class="md-nav__title" for="nav-4">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Behavioral Features
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/feature-introduction/" class="md-nav__link">
|
||||
Introduction
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item md-nav__item--nested">
|
||||
|
||||
|
||||
<input class="md-nav__toggle md-toggle" data-md-toggle="nav-4-2" type="checkbox" id="nav-4-2" >
|
||||
|
||||
<label class="md-nav__link" for="nav-4-2">
|
||||
Phone
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
</label>
|
||||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||||
<label class="md-nav__title" for="nav-4-2">
|
||||
<span class="md-nav__icon md-icon"></span>
|
||||
Phone
|
||||
</label>
|
||||
<ul class="md-nav__list" data-md-scrollfix>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
<a href="../../features/phone-data-quality/" class="md-nav__link">
|
||||
Phone Data Quality
|
||||
</a>
|
||||
</li>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<li class="md-nav__item">
|
||||
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<h1 id="execution">Execution<a class="headerlink" href="#execution" title="Permanent link">¶</a></h1>
|
||||
<p>After you have <a href="../installation">installed</a> and <a href="../configuration">configured</a> RAPIDS, use the following command to execute it.</p>
|
||||
<div class="highlight"><pre><span></span><code>./rapids -j1
|
||||
</code></pre></div>
|
||||
<div class="admonition info">
|
||||
<p class="admonition-title">Info</p>
|
||||
<p>The script <code class="highlight">./rapids</code> is a wrapper around Snakemake so you can pass any parameters that Snakemake accepts (e.g. <code>-j1</code>). </p>
|
||||
</div>
|
||||
<div class="admonition hint">
|
||||
<p class="admonition-title">Updating RAPIDS output after modifying <code>config.yaml</code></p>
|
||||
<p>Any changes to the <code>config.yaml</code> file will be applied automatically and only the relevant files will be updated. This means that after modifying the features list for <code>PHONE_MESSAGE</code> for example, RAPIDS will update the output file with the correct features.</p>
|
||||
</div>
|
||||
<div class="admonition hint">
|
||||
<p class="admonition-title">Multi-core</p>
|
||||
<p>You can run RAPIDS over multiple cores by modifying the <code>-j</code> argument (e.g. use <code>-j8</code> to use 8 cores). <strong>However</strong>, take into account that this means multiple sensor datasets for different participants will be load in memory at the same time. If RAPIDS crashes because it ran out of memory reduce the number of cores and try again.</p>
|
||||
<p>As reference, we have run RAPIDS over 12 cores and 32 Gb of RAM without problems for a study with 200 participants with 14 days of low-frequency smartphone data (no accelerometer, gyroscope, or magnetometer).</p>
|
||||
</div>
|
||||
<div class="admonition hint">
|
||||
<p class="admonition-title">Forcing a complete rerun</p>
|
||||
<p>If you want to update your data from your database or rerun the whole pipeline from scratch run one or both of the following commands depending on the devices you are using:</p>
|
||||
<div class="highlight"><pre><span></span><code>./rapids -j1 -R download_phone_data
|
||||
./rapids -j1 -R download_fitbit_data
|
||||
</code></pre></div>
|
||||
</div>
|
||||
<div class="admonition hint">
|
||||
<p class="admonition-title">Deleting RAPIDS output</p>
|
||||
<p>If you want to delete all the output files RAPIDS produces you can execute the following command (the content of these folders will be deleted: <code>data/raw</code>, <code>data/interim</code>, <code>data/processed</code>, <code>reports/figures</code>, and <code>reports/compliance</code>)</p>
|
||||
<div class="highlight"><pre><span></span><code>./rapids -j1 -R clean
|
||||
</code></pre></div>
|
||||
</div>
|
||||
<div class="admonition done">
|
||||
<p class="admonition-title">Ready to extract behavioral features</p>
|
||||
<p>If you are ready to extract features head over to the <a href="../../features/feature-introduction/">Behavioral Features Introduction</a></p>
|
||||
</div>
|
||||
|
||||
|
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|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url><url>
|
||||
<loc>None</loc>
|
||||
<lastmod>2020-11-09</lastmod>
|
||||
<changefreq>daily</changefreq>
|
||||
</url>
|
||||
</urlset>
|
Binary file not shown.
|
@ -0,0 +1,14 @@
|
|||
@media screen and (min-width: 76.25em) {
|
||||
.md-nav__item--section {
|
||||
display: block;
|
||||
margin: 1.75em 0;
|
||||
}
|
||||
|
||||
.md-nav :not(.md-nav--primary) > .md-nav__list {
|
||||
padding-left: 7px;
|
||||
}
|
||||
}
|
||||
.md-nav__item .md-nav__link--active {
|
||||
color: var(--md-typeset-a-color);
|
||||
background-color: var(--md-code-bg-color);
|
||||
}
|
File diff suppressed because it is too large
Load Diff
|
@ -0,0 +1,974 @@
|
|||
|
||||
<!doctype html>
|
||||
<html lang="en" class="no-js">
|
||||
<head>
|
||||
|
||||
<meta charset="utf-8">
|
||||
<meta name="viewport" content="width=device-width,initial-scale=1">
|
||||
|
||||
|
||||
|
||||
|
||||
<link rel="shortcut icon" href="../../assets/images/favicon.png">
|
||||
<meta name="generator" content="mkdocs-1.1.2, mkdocs-material-6.1.4+insiders-1.9.0">
|
||||
|
||||
|
||||
|
||||
<title>Minimal - RAPIDS</title>
|
||||
|
||||
|
||||
|
||||
<link rel="stylesheet" href="../../assets/stylesheets/main.a2a6bca7.min.css">
|
||||
|
||||
|
||||
<link rel="stylesheet" href="../../assets/stylesheets/palette.c308bc62.min.css">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<link href="https://fonts.gstatic.com" rel="preconnect" crossorigin>
|
||||
<link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Roboto:300,400,400i,700%7CRoboto+Mono&display=fallback">
|
||||
<style>body,input{font-family:"Roboto",-apple-system,BlinkMacSystemFont,Helvetica,Arial,sans-serif}code,kbd,pre{font-family:"Roboto Mono",SFMono-Regular,Consolas,Menlo,monospace}</style>
|
||||
|
||||
|
||||
|
||||
|
||||
<link rel="stylesheet" href="../../stylesheets/extra.css">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
</head>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<body dir="ltr" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue">
|
||||
|
||||
|
||||
<script>var palette=JSON.parse(localStorage.getItem("__palette")||"{}");if(void 0!==palette.color)for(var key in palette.color)document.body.setAttribute("data-md-color-"+key,palette.color[key])</script>
|
||||
|
||||
<input class="md-toggle" data-md-toggle="drawer" type="checkbox" id="__drawer" autocomplete="off">
|
||||
<input class="md-toggle" data-md-toggle="search" type="checkbox" id="__search" autocomplete="off">
|
||||
<label class="md-overlay" for="__drawer"></label>
|
||||
<div data-md-component="skip">
|
||||
|
||||
|
||||
<a href="#minimal-working-example" class="md-skip">
|
||||
Skip to content
|
||||
</a>
|
||||
|
||||
</div>
|
||||
<div data-md-component="announce">
|
||||
|
||||
</div>
|
||||
|
||||
|
||||
|
||||
<header class="md-header" data-md-component="header">
|
||||
<nav class="md-header-nav md-grid" aria-label="Header">
|
||||
<a href="../.." title="RAPIDS" class="md-header-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
<label class="md-header-nav__button md-icon" for="__drawer">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M3 6h18v2H3V6m0 5h18v2H3v-2m0 5h18v2H3v-2z"/></svg>
|
||||
</label>
|
||||
<div class="md-header-nav__title" data-md-component="header-title">
|
||||
<div class="md-header-nav__ellipsis">
|
||||
<div class="md-header-nav__topic">
|
||||
<span class="md-ellipsis">
|
||||
RAPIDS
|
||||
</span>
|
||||
</div>
|
||||
<div class="md-header-nav__topic" data-md-component="header-topic">
|
||||
<span class="md-ellipsis">
|
||||
|
||||
Minimal
|
||||
|
||||
</span>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
<div class="md-header-nav__options">
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
<button class="md-header-nav__button md-icon" title="Switch to light mode" aria-label="Switch to light mode" data-md-option="palette" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M17 7H7a5 5 0 00-5 5 5 5 0 005 5h10a5 5 0 005-5 5 5 0 00-5-5m0 8a3 3 0 01-3-3 3 3 0 013-3 3 3 0 013 3 3 3 0 01-3 3z"/></svg>
|
||||
</button>
|
||||
|
||||
|
||||
|
||||
|
||||
<button class="md-header-nav__button md-icon" title="Switch to dark mode" aria-label="Switch to dark mode" data-md-option="palette" data-md-color-scheme="slate" data-md-color-primary="blue" data-md-color-accent="blue" data-md-state="hidden">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M7 10a2 2 0 012 2 2 2 0 01-2 2 2 2 0 01-2-2 2 2 0 012-2m10-3a5 5 0 015 5 5 5 0 01-5 5H7a5 5 0 01-5-5 5 5 0 015-5h10M7 9a3 3 0 00-3 3 3 3 0 003 3h10a3 3 0 003-3 3 3 0 00-3-3H7z"/></svg>
|
||||
</button>
|
||||
|
||||
|
||||
</div>
|
||||
|
||||
<label class="md-header-nav__button md-icon" for="__search">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
</label>
|
||||
|
||||
<div class="md-search" data-md-component="search" role="dialog">
|
||||
<label class="md-search__overlay" for="__search"></label>
|
||||
<div class="md-search__inner" role="search">
|
||||
<form class="md-search__form" name="search">
|
||||
<input type="text" class="md-search__input" name="query" aria-label="Search" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false" data-md-component="search-query" data-md-state="active">
|
||||
<label class="md-search__icon md-icon" for="__search">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M9.5 3A6.5 6.5 0 0116 9.5c0 1.61-.59 3.09-1.56 4.23l.27.27h.79l5 5-1.5 1.5-5-5v-.79l-.27-.27A6.516 6.516 0 019.5 16 6.5 6.5 0 013 9.5 6.5 6.5 0 019.5 3m0 2C7 5 5 7 5 9.5S7 14 9.5 14 14 12 14 9.5 12 5 9.5 5z"/></svg>
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
|
||||
</label>
|
||||
<button type="reset" class="md-search__icon md-icon" aria-label="Clear" data-md-component="search-reset" tabindex="-1">
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 6.41L17.59 5 12 10.59 6.41 5 5 6.41 10.59 12 5 17.59 6.41 19 12 13.41 17.59 19 19 17.59 13.41 12 19 6.41z"/></svg>
|
||||
</button>
|
||||
<div class="md-search__suggest" data-md-component="search-suggest"></div>
|
||||
</form>
|
||||
<div class="md-search__output">
|
||||
<div class="md-search__scrollwrap" data-md-scrollfix>
|
||||
<div class="md-search-result" data-md-component="search-result">
|
||||
<div class="md-search-result__meta">
|
||||
Initializing search
|
||||
</div>
|
||||
<ol class="md-search-result__list"></ol>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
</div>
|
||||
|
||||
|
||||
<div class="md-header-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
</nav>
|
||||
</header>
|
||||
|
||||
<div class="md-container" data-md-component="container">
|
||||
|
||||
|
||||
|
||||
|
||||
<main class="md-main" data-md-component="main">
|
||||
<div class="md-main__inner md-grid">
|
||||
|
||||
|
||||
|
||||
<div class="md-sidebar md-sidebar--primary" data-md-component="navigation" >
|
||||
<div class="md-sidebar__scrollwrap">
|
||||
<div class="md-sidebar__inner">
|
||||
|
||||
|
||||
<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
||||
<label class="md-nav__title" for="__drawer">
|
||||
<a href="../.." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS">
|
||||
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M19 18.31V20a2 2 0 01-2 2H7a2 2 0 01-2-2v-3.7c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V12.3c-.46-.18-1.05-.3-2-.3a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V8.3C4.54 8.12 3.95 8 3 8a1 1 0 01-1-1 1 1 0 011-1c.82 0 1.47.08 2 .21V4a2 2 0 012-2h10a2 2 0 012 2v2.16c1.78.31 2.54.97 2.71 1.13.39.39.39 1.03 0 1.42-.39.39-.91.38-1.42 0 0 0-1.04-.71-3.29-.71-1.26 0-2.09.41-3.05.9-1.04.51-2.21 1.1-3.95 1.1-.36 0-.69 0-1-.04V7.95c.3.05.63.05 1 .05 1.26 0 2.09-.41 3.05-.89C14.09 6.59 15.27 6 17 6V4H7v16h10v-2c1.5 0 1.97.29 2 .31M17 10c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 11.08 20.25 10 17 10m0 4c-1.73 0-2.91.59-3.95 1.11-.96.48-1.79.89-3.05.89-.37 0-.7 0-1-.05v2.01c.31.04.64.04 1 .04 1.74 0 2.91-.59 3.95-1.1.96-.48 1.79-.9 3.05-.9 2.25 0 3.29.71 3.29.71.51.39 1.03.39 1.42 0 .39-.39.39-1.02 0-1.42C21.5 15.08 20.25 14 17 14z"/></svg>
|
||||
|
||||
</a>
|
||||
RAPIDS
|
||||
</label>
|
||||
|
||||
<div class="md-nav__source">
|
||||
|
||||
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source">
|
||||
<div class="md-source__icon md-icon">
|
||||
|
||||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05L244 40.45a28.87 28.87 0 00-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 01-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 000 40.81l195.61 195.6a28.86 28.86 0 0040.8 0l194.69-194.69a28.86 28.86 0 000-40.81z"/></svg>
|
||||
</div>
|
||||
<div class="md-source__repository">
|
||||
carissalow/rapids
|
||||
</div>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
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<a href="https://github.com/carissalow/rapids/edit/master/docs/workflow-examples/minimal.md" title="Edit this page" class="md-content__button md-icon">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20.71 7.04c.39-.39.39-1.04 0-1.41l-2.34-2.34c-.37-.39-1.02-.39-1.41 0l-1.84 1.83 3.75 3.75M3 17.25V21h3.75L17.81 9.93l-3.75-3.75L3 17.25z"/></svg>
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||||
|
||||
|
||||
<h1 id="minimal-working-example">Minimal Working Example<a class="headerlink" href="#minimal-working-example" title="Permanent link">¶</a></h1>
|
||||
<p>This is a quick guide for creating and running a simple pipeline to extract missing, outgoing, and incoming call features for <code>daily</code> and <code>night</code> epochs of one participant monitored on the US East coast.</p>
|
||||
<ol>
|
||||
<li>Install RAPIDS and make sure your <code>conda</code> environment is active (see <a href="../../setup/installation">Installation</a>)</li>
|
||||
<li>
|
||||
<p>For the <a href="../../setup/configuration">Initial Configuration</a> steps do the following and use the example as a guide:</p>
|
||||
<div class="admonition info">
|
||||
<p class="admonition-title">Things to change on each configuration step</p>
|
||||
<p>1. Setup your database connection credentials in <code>.env</code>. We assume your credentials group is called <code>MY_GROUP</code>.</p>
|
||||
<p>2. <code>America/New_York</code> should be the default timezone</p>
|
||||
<p>3. Create a participant file <code>p01.yaml</code> based on one of your participants and add <code>p01</code> to <code>[PIDS]</code> in <code>config.yaml</code></p>
|
||||
<p>4. <code>[DAY_SEGMENTS][TYPE]</code> should be the default <code>PERIODIC</code>. Change <code>[DAY_SEGMENTS][FILE]</code> with the path of a file containing the following lines:
|
||||
<div class="highlight"><pre><span></span><code>label,start_time,length,repeats_on,repeats_value
|
||||
daily,00:00:00,23H 59M 59S,every_day,0
|
||||
night,00:00:00,5H 59M 59S,every_day,0
|
||||
</code></pre></div></p>
|
||||
<p>5. If you collected data with AWARE you won’t need to modify the attributes of <code>[DEVICE_DATA][PHONE]</code></p>
|
||||
<p>6. Set <code>[PHONE_CALLS][PROVIDERS][RAPIDS][COMPUTE]</code> to <code>True</code></p>
|
||||
</div>
|
||||
<div class="admonition example">
|
||||
<p class="admonition-title">Example of the <code>config.yaml</code> sections after the changes outlined above</p>
|
||||
<div class="highlight"><pre><span></span><code>PIDS: [p01]
|
||||
|
||||
TIMEZONE: &timezone
|
||||
America/New_York
|
||||
|
||||
DATABASE_GROUP: &database_group
|
||||
MY_GROUP
|
||||
|
||||
# ... other irrelevant sections
|
||||
|
||||
DAY_SEGMENTS: &day_segments
|
||||
TYPE: PERIODIC
|
||||
FILE: "data/external/daysegments_periodic.csv" # make sure the three lines specified above are in the file
|
||||
INCLUDE_PAST_PERIODIC_SEGMENTS: FALSE
|
||||
|
||||
# No need to change this if you collected AWARE data on a database and your credentials are grouped under `MY_GROUP` in `.env`
|
||||
DEVICE_DATA:
|
||||
PHONE:
|
||||
SOURCE:
|
||||
TYPE: DATABASE
|
||||
DATABASE_GROUP: *database_group
|
||||
DEVICE_ID_COLUMN: device_id # column name
|
||||
TIMEZONE:
|
||||
TYPE: SINGLE # SINGLE or MULTIPLE
|
||||
VALUE: *timezone
|
||||
|
||||
|
||||
############## PHONE ###########################################################
|
||||
################################################################################
|
||||
|
||||
....
|
||||
|
||||
# Communication call features config, TYPES and FEATURES keys need to match
|
||||
PHONE_CALLS:
|
||||
TABLE: calls # change if your calls table has a different name
|
||||
PROVIDERS:
|
||||
RAPIDS:
|
||||
COMPUTE: True # set this to True!
|
||||
CALL_TYPES: ...
|
||||
</code></pre></div>
|
||||
</div>
|
||||
</li>
|
||||
<li>
|
||||
<p>Run RAPIDS
|
||||
<div class="highlight"><pre><span></span><code>./rapids -j1
|
||||
</code></pre></div></p>
|
||||
</li>
|
||||
<li>The call features for daily and morning day segments will be in
|
||||
<div class="highlight"><pre><span></span><code>/data/processed/features/p01/phone_calls.csv
|
||||
</code></pre></div></li>
|
||||
</ol>
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
|
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|
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<div class="md-footer-copyright__highlight">
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Released under AGPL
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</html>
|
|
@ -1 +1 @@
|
|||
[{"version": "0.1", "title": "0.1", "aliases": []}]
|
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[{"version": "0.1", "title": "0.1", "aliases": ["latest"]}]
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