17 lines
590 B
R
17 lines
590 B
R
source("renv/activate.R")
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library(tidyr)
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library(purrr)
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library("dplyr", warn.conflicts = F)
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library(stringr)
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feature_files <- snakemake@input[["feature_files"]]
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features_of_all_participants <- tibble(filename = feature_files) %>% # create a data frame
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mutate(file_contents = map(filename, ~ read.csv(., stringsAsFactors = F, colClasses = c(local_date = "character"))),
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pid = str_match(filename, ".*/([a-zA-Z]+?[0-9]+?)/.*")[,2]) %>%
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unnest(cols = c(file_contents)) %>%
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select(-filename)
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write.csv(features_of_all_participants, snakemake@output[[1]], row.names = FALSE) |