Primoz
536b9494cd
Cleaning script corrections
2022-09-27 14:12:08 +00:00
Primoz
15d792089d
Changes in cleaning script:
...
- target extracted from config to remove rows where target is nan
- prepared sns.heatmap for further missing values analysis
- necessary changes in config and participant p01
- picture of heatmap which shows the values state after cleaning
2022-09-01 10:33:36 +00:00
Primoz
6ba4a66deb
Squashed commit of the following:
...
commit 31a47a5ee4569264e39d7c445525a6e64bb7700a
Author: Primoz <sisko.primoz@gmail.com>
Date: Wed Jul 20 13:49:22 2022 +0000
Environment version change.
commit 5b274ed8993f58e783bda6d82fce936764209c28
Author: Primoz <sisko.primoz@gmail.com>
Date: Tue Jul 19 16:10:07 2022 +0000
Enabled cleaning for all participants + standardization files.
commit 203fdb31e0f3c647ef8c8a60cb9531831b7ab924
Author: Primoz <sisko.primoz@gmail.com>
Date: Tue Jul 19 14:14:51 2022 +0000
Features cleaning fixes after testing. Visualization script for phone features values.
commit 176178d73b154c30b9eb9eb4a67514f00d6a924e
Author: Primoz <sisko.primoz@gmail.com>
Date: Tue Jul 19 09:05:14 2022 +0000
Revert "Necessary config changes."
This reverts commit 6ec1ef50430d2e1f5ce4670d505d5e84ac47f0a0.
commit 26ea6512c9d512f95837e7b047fe510c1d196403
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 18 13:19:47 2022 +0000
Adding cleaning function condition and cleaning functionality.
commit 575c29eef9c21e6f2d7832871e73bc0941643734
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 18 12:51:56 2022 +0000
Translation of the cleaning individual RAPIDS function from R to py.
commit 6ec1ef50430d2e1f5ce4670d505d5e84ac47f0a0
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 18 12:02:18 2022 +0000
Necessary config changes.
commit b5669f51612fbd8378848615d639677851ab032f
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 15 15:26:00 2022 +0000
Modified snakemake rule to dynamically choose script extention.
commit 66636be1e8ae4828228b37c59b9df1faf3fc3d3d
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 15 14:43:08 2022 +0000
Trying to modify the snakefile rule to execute scripts in two languages depended on the provider.
commit 574778b00f3cbb368ef4bc74de15cf5070c65ea9
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 15 09:49:41 2022 +0000
gitignore: adding required files so that RAPIDS can be run successfully.
commit 71018ab178256970535e78961602ab8c7f0ebb14
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 15 08:34:19 2022 +0000
Standardization bug fixes
commit 6253c470a624e6bfbb02e0c453b652452eb2dbbc
Author: Primoz <sisko.primoz@gmail.com>
Date: Thu Jul 14 15:28:02 2022 +0000
Seperate rules for empatica vs. nonempatica standardization.
Parameter in config that controls the creation of standardized merged files for individual and all participants..
commit 90f902778565e0896d3bae22ae8551be8b487e67
Author: Primoz <sisko.primoz@gmail.com>
Date: Tue Jul 12 14:23:03 2022 +0000
Preparing for final csvs' standardization.
commit d25dde3998786a9a582f5cda544ee104386778f9
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 11 12:08:47 2022 +0000
Revert "Changes in config to be reverted."
This reverts commit bea7608e7095021fb7c53a9afa07074448fe4313.
commit 6b23e70857e63deda98eb98d190af9090626c84b
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 11 12:08:26 2022 +0000
Enabled standardization for rest (previously active) phone features.
Testing still needed.
commit 8ec58a6f34ba3d42e5cc71d26e6d91837472ca5f
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 11 09:07:55 2022 +0000
Enabled standardization for phone calls.
All steps completed and tested.
commit bea7608e7095021fb7c53a9afa07074448fe4313
Author: Primoz <sisko.primoz@gmail.com>
Date: Mon Jul 11 07:47:51 2022 +0000
Changes in config to be reverted.
commit 4e84ca0e51bf709bff56fd09437b95310ec6bedd
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 8 14:11:24 2022 +0000
Standardization for the rest of the features.
commit cc581aa788e3d5c17131af8f3d5dd6b0c3b5aff7
Author: Primoz <sisko.primoz@gmail.com>
Date: Fri Jul 8 14:11:08 2022 +0000
README update again
2022-07-20 13:51:22 +00:00
Primoz
a5480f1369
Few changes during addition to file structure.
2022-07-04 13:00:47 +00:00
Primoz
dda4554d46
Various small changes.
2022-06-15 13:57:46 +00:00
primoz
f371249b99
First order features standardization WIP
2022-06-09 13:35:15 +00:00
Primoz
2a8f58f5c8
Patching IBI with BVP. WIP
2022-05-20 13:18:45 +00:00
Primoz
9cf9e1fe14
Testing and modifying the code with different E4 data.
2022-05-10 11:36:49 +00:00
Primoz
c050174ca3
Various minimal changes.
2022-03-31 09:16:00 +00:00
Primoz
a357138f6e
Added CF for HRV and shortened test data
2022-03-30 15:01:24 +00:00
=
ab0b9227d7
Added ACC calculated features and shorter version of ACC data.
2022-03-29 09:41:51 +00:00
Primoz
191e53e543
Added cf provider for EDA feature processing.
2022-03-23 15:13:53 +00:00
Primoz
3f8e1cc252
Empatica features calculations with an example ZIP
2022-03-16 15:03:32 +00:00
Primoz
dc2b462145
Reseting files to defaults - for Minimal Working Example
2022-03-16 13:30:19 +00:00
junos
b29f902915
Look into ESM table for device_id.
2021-12-15 20:18:12 +01:00
junos
5a9252e46e
Merge remote-tracking branch 'origin/master'
2021-12-15 18:32:36 +01:00
junos
4485c4c95e
Delete columns we don't have.
...
Rename light table.
Correct timesegments.
2021-12-08 20:02:47 +01:00
junos
2b52f686b3
Define daily segments.
2021-12-08 18:20:22 +01:00
Meng Li
3d34036eae
Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider ( #168 )
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* Add firststeptime and laststeptime features to FITBIT_STEPS_INTRADAY RAPIDS provider
* Update test config files
2021-11-18 18:35:27 -05:00
Weiyu
502c1c36e2
documented phone_battery_test and added event tests
2021-04-08 16:50:18 -04:00
JulioV
d0858f8833
Fix overlapping periodic time segments
2021-03-28 15:29:07 -04:00
Meng Li
f8afef8767
Add script & docs to create multi timezones file
2021-03-25 16:22:25 -04:00
JulioV
614e759551
Refactor day segments to time segments
2020-12-02 18:41:03 -05:00
JulioV
1ea2730afd
Update minimal workflow example docs
2020-11-04 13:27:58 -05:00
JulioV
1d04aa6807
Add check for non-overlapping event day segments
2020-10-23 12:15:26 -04:00
kaguillera
ca14eba8e1
Initial testing restructure for 30mins segments
2020-09-18 19:14:07 -04:00
JulioV
4dc8d38c66
Optimise assign to day segment
2020-09-16 14:54:20 -04:00
JulioV
3c45f6b152
Refactor assign to day segment
2020-09-14 14:21:36 -04:00
JulioV
31ec5b0da4
Finalise new day segment structure with calls as example
2020-08-26 12:09:53 -04:00
JulioV
c2d011fb6a
Add base functions to compute_day_segments.py
2020-08-20 14:51:22 -04:00
JulioV
b59f1715fc
Add the daysegments files
2020-08-20 14:51:22 -04:00
JulioV
162ffd019c
Fix error related to external participant file for testing
2020-08-11 18:59:52 -04:00
kaguillera
8c5497ebc0
Fix Travis minor issue
2020-08-11 17:25:08 -04:00
JulioV
63310b7b90
Remove white spaces at the end of some categories
2020-03-12 13:25:06 -04:00
JulioV
9d00f14f7f
Add category (genre) to foreground apps
2020-01-15 18:28:56 -05:00
JulioV
3d2557a595
Add empty data folder
2019-10-24 17:20:11 -04:00