Migrate from pip to conda virtual env

environment.yml

@@ -0,0 +1,94 @@
+name: moshi-env
+channels:
+  - defaults
+  - conda-forge
+dependencies:
+  - appdirs=1.4.3=py37h28b3542_0
+  - arrow=0.15.2=py37_0
+  - asn1crypto=1.2.0=py37_0
+  - attrs=19.3.0=py_0
+  - binaryornot=0.4.4=py_1
+  - blas=1.0=mkl
+  - bzip2=1.0.8=h01d97ff_1
+  - ca-certificates=2019.10.16=0
+  - certifi=2019.9.11=py37_0
+  - cffi=1.13.1=py37h33e799b_0
+  - chardet=3.0.4=py37_1003
+  - click=7.0=py37_0
+  - cookiecutter=1.6.0=py37_1000
+  - cryptography=2.7=py37h212c5bf_0
+  - datrie=0.8=py37h1de35cc_0
+  - docutils=0.15.2=py37_0
+  - future=0.18.1=py37_0
+  - gitdb2=2.0.6=py_0
+  - gitpython=3.0.4=py_0
+  - idna=2.8=py37_0
+  - importlib_metadata=0.23=py37_0
+  - intel-openmp=2019.4=233
+  - jinja2=2.10.3=py_0
+  - jinja2-time=0.2.0=py_2
+  - jsonschema=3.1.1=py37_0
+  - libcxx=9.0.0=h89e68fa_1
+  - libffi=3.2.1=h6de7cb9_1006
+  - libgfortran=3.0.1=0
+  - markupsafe=1.1.1=py37h1de35cc_0
+  - mkl=2019.4=233
+  - mkl-service=2.3.0=py37hfbe908c_0
+  - mkl_fft=1.0.14=py37h5e564d8_0
+  - mkl_random=1.1.0=py37ha771720_0
+  - more-itertools=7.2.0=py37_0
+  - ncurses=6.1=h0a44026_1002
+  - numpy=1.17.2=py37h99e6662_0
+  - numpy-base=1.17.2=py37h6575580_0
+  - openssl=1.1.1d=h1de35cc_3
+  - pandas=0.25.2=py37h0a44026_0
+  - pbr=5.4.3=py_0
+  - pip=19.3.1=py37_0
+  - plotly=4.2.1=py_0
+  - poyo=0.5.0=py_0
+  - psutil=5.6.3=py37h1de35cc_0
+  - pycparser=2.19=py37_1
+  - pyopenssl=19.0.0=py37_0
+  - pyrsistent=0.15.4=py37h1de35cc_0
+  - pysocks=1.7.1=py37_0
+  - python=3.7.3=h93065d6_1
+  - python-dateutil=2.8.0=py37_0
+  - pytz=2019.3=py_0
+  - pyyaml=5.1.2=py37h1de35cc_0
+  - readline=8.0=hcfe32e1_0
+  - requests=2.22.0=py37_1
+  - retrying=1.3.3=py37_2
+  - setuptools=41.6.0=py37_0
+  - six=1.12.0=py37_0
+  - smmap2=2.0.5=py37_0
+  - sqlite=3.30.1=h93121df_0
+  - tk=8.6.9=h2573ce8_1003
+  - urllib3=1.25.6=py37_0
+  - wheel=0.33.6=py37_0
+  - whichcraft=0.6.1=py_0
+  - wrapt=1.11.2=py37h1de35cc_0
+  - xz=5.2.4=h1de35cc_1001
+  - yaml=0.1.7=h1de35cc_1001
+  - zipp=0.6.0=py_0
+  - zlib=1.2.11=h0b31af3_1006
+  - pip:
+    - appdirs==1.4.3
+    - attrs==19.3.0
+    - configargparse==0.15.1
+    - datrie==0.8
+    - docutils==0.15.2
+    - gitdb2==2.0.6
+    - gitpython==3.0.4
+    - importlib-metadata==0.23
+    - jsonschema==3.1.1
+    - more-itertools==7.2.0
+    - psutil==5.6.3
+    - pyrsistent==0.15.5
+    - pyyaml==5.1.2
+    - ratelimiter==1.2.0.post0
+    - smmap2==2.0.5
+    - snakemake==5.7.1
+    - wrapt==1.11.2
+    - zipp==0.6.0
+prefix: /usr/local/Caskroom/miniconda/base/envs/moshi-env
+

requirements.txt

@@ -1,48 +0,0 @@
-appdirs==1.4.3
-arrow==0.15.2
-attrs==19.3.0
-binaryornot==0.4.4
-certifi==2019.9.11
-chardet==3.0.4
-Click==7.0
-ConfigArgParse==0.15.1
-cookiecutter==1.6.0
-datrie==0.8
-docutils==0.15.2
-future==0.18.1
-gitdb2==2.0.6
-GitPython==3.0.4
-idna==2.8
-importlib-metadata==0.23
-Jinja2==2.10.3
-jinja2-time==0.2.0
-jsonschema==3.1.1
-MarkupSafe==1.1.1
-mkl-fft==1.0.14
-mkl-random==1.1.0
-mkl-service==2.3.0
-more-itertools==7.2.0
-numpy==1.17.2
-pandas==0.25.2
-pbr==5.4.3
-plotly==4.2.1
-poyo==0.5.0
-psutil==5.6.3
-pyrsistent==0.15.4
-python-dateutil==2.8.0
-pytz==2019.3
-PyYAML==5.1.2
-ratelimiter==1.2.0.post0
-requests==2.22.0
-retrying==1.3.3
-six==1.12.0
-smmap2==2.0.5
-snakemake==5.7.1
-stevedore==1.31.0
-urllib3==1.25.6
-virtualenv==16.7.7
-virtualenv-clone==0.5.3
-virtualenvwrapper==4.8.4
-whichcraft==0.6.1
-wrapt==1.11.2
-zipp==0.6.0