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Update rule to create analysis workflow participant files

pull/103/head
JulioV 2020-12-03 12:48:32 -05:00
parent fca0528e53
commit 88743b9a14
1 changed files with 2 additions and 2 deletions
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4
rules/preprocessing.smk
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@ -11,9 +11,9 @@ rule restore_sql_file:
rule create_example_participant_files: rule create_example_participant_files:
output: output:
expand("data/external/{pid}", pid = ["example01", "example02"]) expand("data/external/participant_files/{pid}.yaml", pid = ["example01", "example02"])
shell: shell:
"echo 'a748ee1a-1d0b-4ae9-9074-279a2b6ba524\nandroid\ntest01\n2020/04/23,2020/05/04\n' >> ./data/external/example01 && echo '13dbc8a3-dae3-4834-823a-4bc96a7d459d\nios\ntest02\n2020/04/23,2020/05/04\n' >> ./data/external/example02" "echo 'PHONE:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n PLATFORMS: [android]\n LABEL: test01\n START_DATE: 2020/04/23\n END_DATE: 2020/05/04\nFITBIT:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n LABEL: test01\n START_DATE: 2020/04/23\n END_DATE: 2020/05/04\n' >> ./data/external/participant_files/example01.yaml && echo 'PHONE:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n PLATFORMS: [ios]\n LABEL: test02\n START_DATE: 2020/04/23\n END_DATE: 2020/05/04\nFITBIT:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n LABEL: test02\n START_DATE: 2020/04/23\n END_DATE: 2020/05/04\n' >> ./data/external/participant_files/example02.yaml"
rule create_participants_files: rule create_participants_files:
input: input: