junos
/
rapids
1
0
Fork 0
Code Issues Pull Requests Projects Releases Wiki Activity

Configure timezone file to be created automatically.

labels
junos 2021-12-08 18:21:29 +01:00
parent 2b52f686b3
commit 1f54195437
2 changed files with 5 additions and 8 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
config.yaml
View File

@ -27,16 +27,13 @@ TIME_SEGMENTS: &time_segments
# See https://www.rapids.science/latest/setup/configuration/#timezone-of-your-study # See https://www.rapids.science/latest/setup/configuration/#timezone-of-your-study
TIMEZONE: TIMEZONE:
TYPE: SINGLE TYPE: MULTIPLE
SINGLE: SINGLE:
TZCODE: Europe/Ljubljana TZCODE: Europe/Ljubljana
MULTIPLE: MULTIPLE:
TZCODES_FILE: data/external/multiple_timezones_example.csv TZCODES_FILE: data/external/multiple_timezones.csv
IF_MISSING_TZCODE: STOP IF_MISSING_TZCODE: USE_DEFAULT
DEFAULT_TZCODE: Europe/Ljubljana DEFAULT_TZCODE: Europe/Ljubljana
FITBIT:
ALLOW_MULTIPLE_TZ_PER_DEVICE: False
INFER_FROM_SMARTPHONE_TZ: False
######################################################################################################################## ########################################################################################################################
# PHONE # # PHONE #

4
rules/preprocessing.smk
View File

@ -4,7 +4,7 @@ rule create_example_participant_files:
shell: shell:
"echo 'PHONE:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n PLATFORMS: [android]\n LABEL: test-01\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\nFITBIT:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n LABEL: test-01\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\n' >> ./data/external/participant_files/example01.yaml && echo 'PHONE:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n PLATFORMS: [ios]\n LABEL: test-02\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\nFITBIT:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n LABEL: test-02\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\n' >> ./data/external/participant_files/example02.yaml" "echo 'PHONE:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n PLATFORMS: [android]\n LABEL: test-01\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\nFITBIT:\n DEVICE_IDS: [a748ee1a-1d0b-4ae9-9074-279a2b6ba524]\n LABEL: test-01\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\n' >> ./data/external/participant_files/example01.yaml && echo 'PHONE:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n PLATFORMS: [ios]\n LABEL: test-02\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\nFITBIT:\n DEVICE_IDS: [13dbc8a3-dae3-4834-823a-4bc96a7d459d]\n LABEL: test-02\n START_DATE: 2020-04-23 00:00:00\n END_DATE: 2020-05-04 23:59:59\n' >> ./data/external/participant_files/example02.yaml"
rule query_device_empatica_ids: rule query_usernames_device_empatica_ids:
params: params:
baseline_folder = "/mnt/e/STRAWbaseline/" baseline_folder = "/mnt/e/STRAWbaseline/"
output: output:
@ -17,7 +17,7 @@ rule prepare_tzcodes_file:
input: input:
timezone_file = "data/external/timezone.csv" timezone_file = "data/external/timezone.csv"
output: output:
tzcodes_file = "data/external/multiple_timezones.csv" tzcodes_file = config["TIMEZONE"]["MULTIPLE"]["TZCODES_FILE"]
script: script:
"../tools/create_multi_timezones_file.py" "../tools/create_multi_timezones_file.py"