25 lines
1.4 KiB
Python
25 lines
1.4 KiB
Python
# Features.smk #########################################################################################################
|
|
def find_features_files(wildcards):
|
|
feature_files = []
|
|
for provider_key, provider in config[(wildcards.sensor_key).upper()]["PROVIDERS"].items():
|
|
if provider["COMPUTE"]:
|
|
feature_files.extend(expand("data/interim/{{pid}}/{sensor_key}_features/{sensor_key}_{language}_{provider_key}.csv", sensor_key=wildcards.sensor_key.lower(), language=provider["SRC_LANGUAGE"].lower(), provider_key=provider_key.lower()))
|
|
return(feature_files)
|
|
|
|
def optional_steps_sleep_input(wildcards):
|
|
if config["STEP"]["EXCLUDE_SLEEP"]["EXCLUDE"] == True and config["STEP"]["EXCLUDE_SLEEP"]["TYPE"] == "FITBIT_BASED":
|
|
return "data/raw/{pid}/fitbit_sleep_summary_with_datetime.csv"
|
|
else:
|
|
return []
|
|
|
|
def input_merge_sensor_features_for_individual_participants(wildcards):
|
|
feature_files = []
|
|
for config_key in config.keys():
|
|
if config_key.startswith(("PHONE", "FITBIT")) and "PROVIDERS" in config[config_key]:
|
|
for provider_key, provider in config[config_key]["PROVIDERS"].items():
|
|
if "COMPUTE" in provider.keys() and provider["COMPUTE"]:
|
|
feature_files.append("data/processed/features/{pid}/" + config_key.lower() + ".csv")
|
|
break
|
|
return feature_files
|
|
|