1938 lines
50 KiB
HTML
1938 lines
50 KiB
HTML
|
|
<!doctype html>
|
|
<html lang="en" class="no-js">
|
|
<head>
|
|
|
|
<meta charset="utf-8">
|
|
<meta name="viewport" content="width=device-width,initial-scale=1">
|
|
|
|
|
|
|
|
|
|
<link rel="canonical" href="https://www.rapids.science/1.1/migrating-from-old-versions/">
|
|
|
|
|
|
|
|
|
|
<link rel="icon" href="../img/logo.png">
|
|
<meta name="generator" content="mkdocs-1.1.2, mkdocs-material-7.0.7+insiders-2.4.0">
|
|
|
|
|
|
|
|
<title>Migrating from an old version - RAPIDS</title>
|
|
|
|
|
|
|
|
<link rel="stylesheet" href="../assets/stylesheets/main.ec3b3678.min.css">
|
|
|
|
|
|
<link rel="stylesheet" href="../assets/stylesheets/palette.de2705de.min.css">
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<link rel="preconnect" href="https://fonts.gstatic.com" crossorigin>
|
|
<link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Roboto:300,400,400i,700%7CRoboto+Mono&display=fallback">
|
|
<style>:root{--md-text-font-family:"Roboto";--md-code-font-family:"Roboto Mono"}</style>
|
|
|
|
|
|
|
|
|
|
<link rel="stylesheet" href="../stylesheets/extra.css">
|
|
|
|
|
|
|
|
|
|
|
|
</head>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<body dir="ltr" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue">
|
|
|
|
|
|
<script>function __prefix(e){return new URL("..",location).pathname+"."+e}function __get(e,t=localStorage){return JSON.parse(t.getItem(__prefix(e)))}</script>
|
|
|
|
<script>var palette=__get("__palette");if(null!==palette&&"object"==typeof palette.color)for(var key in palette.color)document.body.setAttribute("data-md-color-"+key,palette.color[key])</script>
|
|
|
|
<input class="md-toggle" data-md-toggle="drawer" type="checkbox" id="__drawer" autocomplete="off">
|
|
<input class="md-toggle" data-md-toggle="search" type="checkbox" id="__search" autocomplete="off">
|
|
<label class="md-overlay" for="__drawer"></label>
|
|
<div data-md-component="skip">
|
|
|
|
|
|
<a href="#migration-guides" class="md-skip">
|
|
Skip to content
|
|
</a>
|
|
|
|
</div>
|
|
<div data-md-component="announce">
|
|
|
|
</div>
|
|
|
|
<div data-md-component="outdated" hidden>
|
|
<aside class="md-banner md-banner--warning">
|
|
|
|
<div class="md-banner__inner md-grid md-typeset">
|
|
|
|
You're not viewing the latest stable version of RAPIDS.
|
|
<a href="https://www.rapids.science/1.1">
|
|
<strong> Click here to go to latest. </strong>
|
|
</a>
|
|
|
|
</div>
|
|
<script>var el=document.querySelector("[data-md-component=outdated]"),outdated=__get("__outdated",sessionStorage);!0===outdated&&el&&(el.hidden=!1)</script>
|
|
|
|
</aside>
|
|
</div>
|
|
|
|
|
|
|
|
|
|
<header class="md-header" data-md-component="header">
|
|
<nav class="md-header__inner md-grid" aria-label="Header">
|
|
<a href=".." title="RAPIDS" class="md-header__button md-logo" aria-label="RAPIDS" data-md-component="logo">
|
|
|
|
<img src="../img/logo.png" alt="logo">
|
|
|
|
</a>
|
|
<label class="md-header__button md-icon" for="__drawer">
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M3 6h18v2H3V6m0 5h18v2H3v-2m0 5h18v2H3v-2z"/></svg>
|
|
</label>
|
|
<div class="md-header__title" data-md-component="header-title">
|
|
<div class="md-header__ellipsis">
|
|
<div class="md-header__topic">
|
|
<span class="md-ellipsis">
|
|
RAPIDS
|
|
</span>
|
|
</div>
|
|
<div class="md-header__topic" data-md-component="header-topic">
|
|
<span class="md-ellipsis">
|
|
|
|
Migrating from an old version
|
|
|
|
</span>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
<form class="md-header__option" data-md-component="palette">
|
|
|
|
|
|
|
|
<input class="md-option" data-md-color-media="" data-md-color-scheme="default" data-md-color-primary="blue" data-md-color-accent="blue" type="radio" name="__palette" id="__palette_1">
|
|
<label class="md-header__button md-icon" title="Switch to light mode" for="__palette_2" hidden>
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M17 7H7a5 5 0 0 0-5 5 5 5 0 0 0 5 5h10a5 5 0 0 0 5-5 5 5 0 0 0-5-5m0 8a3 3 0 0 1-3-3 3 3 0 0 1 3-3 3 3 0 0 1 3 3 3 3 0 0 1-3 3z"/></svg>
|
|
</label>
|
|
|
|
|
|
|
|
<input class="md-option" data-md-color-media="" data-md-color-scheme="slate" data-md-color-primary="blue" data-md-color-accent="blue" type="radio" name="__palette" id="__palette_2">
|
|
<label class="md-header__button md-icon" title="Switch to dark mode" for="__palette_1" hidden>
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M7 10a2 2 0 0 1 2 2 2 2 0 0 1-2 2 2 2 0 0 1-2-2 2 2 0 0 1 2-2m10-3a5 5 0 0 1 5 5 5 5 0 0 1-5 5H7a5 5 0 0 1-5-5 5 5 0 0 1 5-5h10M7 9a3 3 0 0 0-3 3 3 3 0 0 0 3 3h10a3 3 0 0 0 3-3 3 3 0 0 0-3-3H7z"/></svg>
|
|
</label>
|
|
|
|
</form>
|
|
|
|
|
|
|
|
|
|
<div class="md-header__source">
|
|
|
|
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source" data-md-component="source">
|
|
<div class="md-source__icon md-icon">
|
|
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05 244 40.45a28.87 28.87 0 0 0-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 0 1-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 0 0 0 40.81l195.61 195.6a28.86 28.86 0 0 0 40.8 0l194.69-194.69a28.86 28.86 0 0 0 0-40.81z"/></svg>
|
|
</div>
|
|
<div class="md-source__repository">
|
|
carissalow/rapids
|
|
</div>
|
|
</a>
|
|
</div>
|
|
|
|
</nav>
|
|
|
|
</header>
|
|
|
|
<div class="md-container" data-md-component="container">
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<main class="md-main" data-md-component="main">
|
|
<div class="md-main__inner md-grid">
|
|
|
|
|
|
|
|
<div class="md-sidebar md-sidebar--primary" data-md-component="sidebar" data-md-type="navigation" >
|
|
<div class="md-sidebar__scrollwrap">
|
|
<div class="md-sidebar__inner">
|
|
|
|
|
|
|
|
<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
|
|
<label class="md-nav__title" for="__drawer">
|
|
<a href=".." title="RAPIDS" class="md-nav__button md-logo" aria-label="RAPIDS" data-md-component="logo">
|
|
|
|
<img src="../img/logo.png" alt="logo">
|
|
|
|
</a>
|
|
RAPIDS
|
|
</label>
|
|
|
|
<div class="md-nav__source">
|
|
|
|
<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source" data-md-component="source">
|
|
<div class="md-source__icon md-icon">
|
|
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05 244 40.45a28.87 28.87 0 0 0-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 0 1-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 0 0 0 40.81l195.61 195.6a28.86 28.86 0 0 0 40.8 0l194.69-194.69a28.86 28.86 0 0 0 0-40.81z"/></svg>
|
|
</div>
|
|
<div class="md-source__repository">
|
|
carissalow/rapids
|
|
</div>
|
|
</a>
|
|
</div>
|
|
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href=".." class="md-nav__link">
|
|
Home
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_2" type="checkbox" id="__nav_2" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_2">
|
|
Setup
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Setup" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_2">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Setup
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../setup/overview/" class="md-nav__link">
|
|
Overview
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../workflow-examples/minimal/" class="md-nav__link">
|
|
Minimal Example
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../setup/installation/" class="md-nav__link">
|
|
Installation
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../setup/configuration/" class="md-nav__link">
|
|
Configuration
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../setup/execution/" class="md-nav__link">
|
|
Execution
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../citation/" class="md-nav__link">
|
|
Citation
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3" type="checkbox" id="__nav_3" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_3">
|
|
Data Streams
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Data Streams" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_3">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Data Streams
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/data-streams-introduction/" class="md-nav__link">
|
|
Introduction
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_2" type="checkbox" id="__nav_3_2" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_3_2">
|
|
Phone
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_3_2">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Phone
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/aware-mysql/" class="md-nav__link">
|
|
aware_mysql
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/aware-csv/" class="md-nav__link">
|
|
aware_csv
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/aware-influxdb/" class="md-nav__link">
|
|
aware_influxdb (beta)
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/mandatory-phone-format/" class="md-nav__link">
|
|
Mandatory Phone Format
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_3" type="checkbox" id="__nav_3_3" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_3_3">
|
|
Fitbit
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Fitbit" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_3_3">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Fitbit
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/fitbitjson-mysql/" class="md-nav__link">
|
|
fitbitjson_mysql
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/fitbitjson-csv/" class="md-nav__link">
|
|
fitbitjson_csv
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/fitbitparsed-mysql/" class="md-nav__link">
|
|
fitbitparsed_mysql
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/fitbitparsed-csv/" class="md-nav__link">
|
|
fitbitparsed_csv
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/mandatory-fitbit-format/" class="md-nav__link">
|
|
Mandatory Fitbit Format
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_4" type="checkbox" id="__nav_3_4" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_3_4">
|
|
Empatica
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Empatica" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_3_4">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Empatica
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/empatica-zip/" class="md-nav__link">
|
|
empatica_zip
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/mandatory-empatica-format/" class="md-nav__link">
|
|
Mandatory Empatica Format
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../datastreams/add-new-data-streams/" class="md-nav__link">
|
|
Add New Data Streams
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4" type="checkbox" id="__nav_4" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_4">
|
|
Behavioral Features
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_4">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Behavioral Features
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/feature-introduction/" class="md-nav__link">
|
|
Introduction
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_2" type="checkbox" id="__nav_4_2" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_4_2">
|
|
Phone
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_4_2">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Phone
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-accelerometer/" class="md-nav__link">
|
|
Phone Accelerometer
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-activity-recognition/" class="md-nav__link">
|
|
Phone Activity Recognition
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-applications-crashes/" class="md-nav__link">
|
|
Phone Applications Crashes
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-applications-foreground/" class="md-nav__link">
|
|
Phone Applications Foreground
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-applications-notifications/" class="md-nav__link">
|
|
Phone Applications Notifications
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-battery/" class="md-nav__link">
|
|
Phone Battery
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-bluetooth/" class="md-nav__link">
|
|
Phone Bluetooth
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-calls/" class="md-nav__link">
|
|
Phone Calls
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-conversation/" class="md-nav__link">
|
|
Phone Conversation
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-data-yield/" class="md-nav__link">
|
|
Phone Data Yield
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-keyboard/" class="md-nav__link">
|
|
Phone Keyboard
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-light/" class="md-nav__link">
|
|
Phone Light
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-locations/" class="md-nav__link">
|
|
Phone Locations
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-log/" class="md-nav__link">
|
|
Phone Log
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-messages/" class="md-nav__link">
|
|
Phone Messages
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-screen/" class="md-nav__link">
|
|
Phone Screen
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-wifi-connected/" class="md-nav__link">
|
|
Phone WiFI Connected
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/phone-wifi-visible/" class="md-nav__link">
|
|
Phone WiFI Visible
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_3" type="checkbox" id="__nav_4_3" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_4_3">
|
|
Fitbit
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Fitbit" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_4_3">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Fitbit
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-calories-intraday/" class="md-nav__link">
|
|
Fitbit Calories Intraday
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-data-yield/" class="md-nav__link">
|
|
Fitbit Data Yield
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-heartrate-summary/" class="md-nav__link">
|
|
Fitbit Heart Rate Summary
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-heartrate-intraday/" class="md-nav__link">
|
|
Fitbit Heart Rate Intraday
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-sleep-summary/" class="md-nav__link">
|
|
Fitbit Sleep Summary
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-sleep-intraday/" class="md-nav__link">
|
|
Fitbit Sleep Intraday
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-steps-summary/" class="md-nav__link">
|
|
Fitbit Steps Summary
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/fitbit-steps-intraday/" class="md-nav__link">
|
|
Fitbit Steps Intraday
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_4" type="checkbox" id="__nav_4_4" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_4_4">
|
|
Empatica
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Empatica" data-md-level="2">
|
|
<label class="md-nav__title" for="__nav_4_4">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Empatica
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-accelerometer/" class="md-nav__link">
|
|
Empatica Accelerometer
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-heartrate/" class="md-nav__link">
|
|
Empatica Heart Rate
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-temperature/" class="md-nav__link">
|
|
Empatica Temperature
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-electrodermal-activity/" class="md-nav__link">
|
|
Empatica Electrodermal Activity
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-blood-volume-pulse/" class="md-nav__link">
|
|
Empatica Blood Volume Pulse
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-inter-beat-interval/" class="md-nav__link">
|
|
Empatica Inter Beat Interval
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/empatica-tags/" class="md-nav__link">
|
|
Empatica Tags
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../features/add-new-features/" class="md-nav__link">
|
|
Add New Features
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_5" type="checkbox" id="__nav_5" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_5">
|
|
Visualizations
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Visualizations" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_5">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Visualizations
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../visualizations/data-quality-visualizations/" class="md-nav__link">
|
|
Data Quality
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../visualizations/feature-visualizations/" class="md-nav__link">
|
|
Features
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_6" type="checkbox" id="__nav_6" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_6">
|
|
Analysis Workflows
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Analysis Workflows" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_6">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Analysis Workflows
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../workflow-examples/analysis/" class="md-nav__link">
|
|
Complete Example
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_7" type="checkbox" id="__nav_7" >
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_7">
|
|
Developers
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Developers" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_7">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Developers
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/git-flow/" class="md-nav__link">
|
|
Git Flow
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/remote-support/" class="md-nav__link">
|
|
Remote Support
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/virtual-environments/" class="md-nav__link">
|
|
Virtual Environments
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/documentation/" class="md-nav__link">
|
|
Documentation
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/testing/" class="md-nav__link">
|
|
Testing
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/test-cases/" class="md-nav__link">
|
|
Test cases
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../developers/validation-schema-config/" class="md-nav__link">
|
|
Validation schema of config.yaml
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--active md-nav__item--section md-nav__item--nested">
|
|
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_8" type="checkbox" id="__nav_8" checked>
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link" for="__nav_8">
|
|
Others
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<nav class="md-nav" aria-label="Others" data-md-level="1">
|
|
<label class="md-nav__title" for="__nav_8">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Others
|
|
</label>
|
|
<ul class="md-nav__list" data-md-scrollfix>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item md-nav__item--active">
|
|
|
|
<input class="md-nav__toggle md-toggle" data-md-toggle="toc" type="checkbox" id="__toc">
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__link md-nav__link--active" for="__toc">
|
|
Migrating from an old version
|
|
<span class="md-nav__icon md-icon"></span>
|
|
</label>
|
|
|
|
<a href="./" class="md-nav__link md-nav__link--active">
|
|
Migrating from an old version
|
|
</a>
|
|
|
|
|
|
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
|
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__title" for="__toc">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Table of contents
|
|
</label>
|
|
<ul class="md-nav__list" data-md-component="toc" data-md-scrollfix>
|
|
|
|
<li class="md-nav__item">
|
|
<a href="#migrating-from-rapids-04x-or-older" class="md-nav__link">
|
|
Migrating from RAPIDS 0.4.x or older
|
|
</a>
|
|
|
|
</li>
|
|
|
|
<li class="md-nav__item">
|
|
<a href="#migrating-from-rapids-beta" class="md-nav__link">
|
|
Migrating from RAPIDS beta
|
|
</a>
|
|
|
|
</li>
|
|
|
|
</ul>
|
|
|
|
</nav>
|
|
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../code_of_conduct/" class="md-nav__link">
|
|
Code of Conduct
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../common-errors/" class="md-nav__link">
|
|
Common Errors
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../team/" class="md-nav__link">
|
|
Team
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<li class="md-nav__item">
|
|
<a href="../change-log/" class="md-nav__link">
|
|
Change Log
|
|
</a>
|
|
</li>
|
|
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</li>
|
|
|
|
|
|
|
|
</ul>
|
|
</nav>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
|
|
<div class="md-sidebar md-sidebar--secondary" data-md-component="sidebar" data-md-type="toc" >
|
|
<div class="md-sidebar__scrollwrap">
|
|
<div class="md-sidebar__inner">
|
|
|
|
<nav class="md-nav md-nav--secondary" aria-label="Table of contents">
|
|
|
|
|
|
|
|
|
|
|
|
<label class="md-nav__title" for="__toc">
|
|
<span class="md-nav__icon md-icon"></span>
|
|
Table of contents
|
|
</label>
|
|
<ul class="md-nav__list" data-md-component="toc" data-md-scrollfix>
|
|
|
|
<li class="md-nav__item">
|
|
<a href="#migrating-from-rapids-04x-or-older" class="md-nav__link">
|
|
Migrating from RAPIDS 0.4.x or older
|
|
</a>
|
|
|
|
</li>
|
|
|
|
<li class="md-nav__item">
|
|
<a href="#migrating-from-rapids-beta" class="md-nav__link">
|
|
Migrating from RAPIDS beta
|
|
</a>
|
|
|
|
</li>
|
|
|
|
</ul>
|
|
|
|
</nav>
|
|
</div>
|
|
</div>
|
|
</div>
|
|
|
|
|
|
<div class="md-content" data-md-component="content">
|
|
<article class="md-content__inner md-typeset">
|
|
|
|
|
|
<a href="https://github.com/carissalow/rapids/edit/master/docs/migrating-from-old-versions.md" title="Edit this page" class="md-content__button md-icon">
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20.71 7.04c.39-.39.39-1.04 0-1.41l-2.34-2.34c-.37-.39-1.02-.39-1.41 0l-1.84 1.83 3.75 3.75M3 17.25V21h3.75L17.81 9.93l-3.75-3.75L3 17.25z"/></svg>
|
|
</a>
|
|
|
|
|
|
<h1 id="migration-guides">Migration guides<a class="headerlink" href="#migration-guides" title="Permanent link">¶</a></h1>
|
|
<h2 id="migrating-from-rapids-04x-or-older">Migrating from RAPIDS 0.4.x or older<a class="headerlink" href="#migrating-from-rapids-04x-or-older" title="Permanent link">¶</a></h2>
|
|
<p>There are four actions that you need to take if you were using RAPIDS <code>0.4.3</code> or older (<a href="https://github.com/carissalow/rapids/releases/tag/v0.4.3">before Feb 9<sup>th</sup>, 2021</a>):</p>
|
|
<details class="check"><summary>Check the new Overview page</summary><p>Check the new <a href="../setup/overview/">Overview</a> page. Hopefully, it is a better overview of RAPIDS and provides answers to Frequently Asked Questions.</p>
|
|
</details>
|
|
<details class="check"><summary>Deploy RAPIDS in a new folder</summary><ul>
|
|
<li>Clone RAPIDS 1.x in a new folder (do not pull the updates in your current folder)</li>
|
|
<li>Activate your conda environment</li>
|
|
<li>Install renv again <code>snakemake -j1 renv_install</code> (for Ubuntu take advantage of the <a href="../setup/installation">platform specific R <code>renv</code> instructions</a>)</li>
|
|
<li>Restore renv packages <code>snakemake -j1 renv_restore</code> (for Ubuntu take advantage of the <a href="../setup/installation">platform specific R <code>renv</code> instructions</a>)</li>
|
|
<li>Move your participant files <code>pxx.yaml</code> to the new folder</li>
|
|
<li>Move your time segment files to the new folder</li>
|
|
<li>Move your <code>.env</code> file to the new folder</li>
|
|
</ul>
|
|
</details>
|
|
<details class="check"><summary>Migrate your <code>.env</code> file to the new <code>credentials.yaml</code> format</summary><p>The <code>.env</code> file is not used anymore, the same credential groups are stored in <code>credentials.yaml</code>, migrate your <code>.env</code> file by running:
|
|
<div class="highlight"><pre><span></span><code>python tools/update_format_env.py
|
|
</code></pre></div></p>
|
|
</details>
|
|
<details class="check"><summary>Reconfigure your <code>config.yaml</code></summary><p>Reconfigure your <code>config.yaml</code> file by hand (don’t copy and paste the old one). Some keys and values changed but the defaults should be compatible with the things you know from RAPIDS 0.x (see below).</p>
|
|
</details>
|
|
<p>The most relevant changes to RAPIDS that you need to know about are:</p>
|
|
<details class="danger"><summary>We introduced the concept of data streams</summary><p>RAPIDS abstracts sensor data logged by different devices, platforms and stored in different data containers as <a href="../datastreams/data-streams-introduction/">data streams</a>.</p>
|
|
<p>The default data stream for <code>PHONE</code> is <a href="../datastreams/aware-mysql/"><code>aware_mysql</code></a>, and the default for <code>FITBIT</code> is <a href="../datastreams/fitbitjson-mysql/"><code>fitbitjson_mysql</code></a>. This is compatible with the old functionality (AWARE and JSON Fitbit data stored in MySQL). These values are set in <code>[PHONE_DATA_STREAMS][USE]</code> and <code>[FITBIT_DATA_STREAMS][USE]</code>.</p>
|
|
<p>You can <a href="../datastreams/add-new-data-streams/">add new data stream</a> formats (sensing apps) and containers (database engines, file types, etc.).</p>
|
|
<p>If you were processing your Fitbit data either in JSON or plain text (parsed) format, and it was stored in MySQL or CSV files, the changes that you made to your raw data will be compatible. Just choose <a href="../datastreams/fitbitjson-mysql/"><code>fitbitjson_mysql</code></a>, <a href="../datastreams/fitbitparsed-mysql/"><code>fitbitparsed_mysql</code></a>, <a href="../datastreams/fitbitjson-csv/"><code>fitbitjson_csv</code></a>, <a href="../datastreams/fitbitparsed-csv/"><code>fitbitparsed_csv</code></a> accordingly and set it in <code>[FITBIT_DATA_STREAMS][USE]</code>. </p>
|
|
<p>In the future, you will not have to change your raw data; you will be able to just change column mappings/values in the data stream’s <code>format.yaml</code> file.</p>
|
|
</details>
|
|
<details class="danger"><summary>We introduced multiple time zones</summary><p>You can now process data from participants that visited multiple time zones. The default is still a single time zone (America/New_York). See how to handle <a href="../setup/configuration/#multiple-timezones">multiple time zones</a></p>
|
|
</details>
|
|
<details class="danger"><summary>The keyword <code>multiple</code> is now <code>infer</code></summary><p>When processing data from smartphones, RAPIDS allows you to <a href="../setup/configuration/#participant-files">infer</a> the OS of a smartphone by using the keyword <code>multiple</code> in the <code>[PLATFORM]</code> key of participant files. Now RAPIDS uses <code>infer</code> instead of <code>multiple</code> Nonetheless, <code>multiple</code> still works for backward compatibility.</p>
|
|
</details>
|
|
<details class="danger"><summary>A global <code>DATABASE_GROUP</code> does not exist anymore</summary><p>There is no global <code>DATABASE_GROUP</code> anymore. Each data stream that needs credentials to connect to a database has its own <a href="../setup/configuration/#data-stream-configuration"><code>DATABASE_GROUP</code> config key</a>. The groups are defined in <code>credentials.yaml</code> instead of the <code>.env</code>.</p>
|
|
</details>
|
|
<details class="danger"><summary><code>[DEVICE_SENSOR][TABLE]</code> is now <code>[DEVICE_SENSOR][CONTAINER]</code></summary><p>We renamed the keys <code>[DEVICE_SENSOR][TABLE]</code> to <code>[DEVICE_SENSOR][CONTAINER]</code> to reflect that, with the introduction of data streams, they can point to a database table, file, or any other data container.</p>
|
|
</details>
|
|
<details class="danger"><summary>Creating participant files from the AWARE_DEVICE_TABLE is deprecated</summary><p>In previous versions of RAPIDS, you could create participant files automatically using the <code>aware_device</code> table. We deprecated this option but you can still achieve the same results if you export the output of the following SQL query as a CSV file and follow the instructions to <a href="../setup/configuration/#automatic-creation-of-participant-files">create participant files from CSV files</a>:</p>
|
|
<div class="highlight"><pre><span></span><code><span class="k">SELECT</span> <span class="n">device_id</span><span class="p">,</span> <span class="n">device_id</span> <span class="k">as</span> <span class="n">fitbit_id</span><span class="p">,</span> <span class="n">CONCAT</span><span class="p">(</span><span class="ss">"p"</span><span class="p">,</span> <span class="n">_id</span><span class="p">)</span> <span class="k">as</span> <span class="n">empatica_id</span><span class="p">,</span> <span class="n">CONCAT</span><span class="p">(</span><span class="ss">"p"</span><span class="p">,</span> <span class="n">_id</span><span class="p">)</span> <span class="k">as</span> <span class="n">pid</span><span class="p">,</span> <span class="k">if</span><span class="p">(</span><span class="n">brand</span> <span class="o">=</span> <span class="ss">"iPhone"</span><span class="p">,</span> <span class="ss">"ios"</span><span class="p">,</span> <span class="ss">"android"</span><span class="p">)</span> <span class="k">as</span> <span class="n">platform</span><span class="p">,</span> <span class="n">CONCAT</span><span class="p">(</span><span class="ss">"p"</span><span class="p">,</span> <span class="n">_id</span><span class="p">)</span> <span class="k">as</span> <span class="n">label</span><span class="p">,</span> <span class="n">DATE_FORMAT</span><span class="p">(</span><span class="n">FROM_UNIXTIME</span><span class="p">((</span><span class="k">timestamp</span><span class="o">/</span><span class="mi">1000</span><span class="p">)</span><span class="o">-</span> <span class="mi">86400</span><span class="p">),</span> <span class="ss">"%Y-%m-%d"</span><span class="p">)</span> <span class="k">as</span> <span class="n">start_date</span><span class="p">,</span> <span class="k">CURRENT_DATE</span> <span class="k">as</span> <span class="n">end_date</span> <span class="k">from</span> <span class="n">aware_device</span> <span class="k">order</span> <span class="k">by</span> <span class="n">_id</span><span class="p">;</span>
|
|
</code></pre></div>
|
|
</details>
|
|
<details class="danger"><summary><code>SCR_SCRIPT</code> and <code>SRC_LANGUAGE</code> are replaced by <code>SRC_SCRIPT</code></summary><p>The attributes <code>SCR_SCRIPT</code> and <code>SRC_LANGUAGE</code> of every sensor <code>PROVIDER</code> are replaced by <code>SRC_SCRIPT</code>. <code>SRC_SCRIPT</code> is a relative path from the RAPIDS root folder to that provider’s feature script. We did this to simplify and clarify where the features scripts are stored. </p>
|
|
<p>There are no actions to take unless you created your own feature provider; update it with your feature script path.</p>
|
|
</details>
|
|
<h2 id="migrating-from-rapids-beta">Migrating from RAPIDS beta<a class="headerlink" href="#migrating-from-rapids-beta" title="Permanent link">¶</a></h2>
|
|
<p>If you were relying on the <a href="https://rapidspitt.readthedocs.io/en/latest/">old docs</a> and the most recent version of RAPIDS you are working with is from or before <a href="https://github.com/carissalow/rapids/commit/640890c7b49492d150accff5c87b1eb25bd97a49">Oct 13, 2020</a> you are using the beta version of RAPIDS.</p>
|
|
<p>You can start using the RAPIDS <code>0.1.0</code> right away, just take into account the following:</p>
|
|
<details class="check"><summary>Deploy RAPIDS in a new folder</summary><ul>
|
|
<li><a href="../setup/installation/">Install</a> a new copy of RAPIDS (the R and Python virtual environments didn’t change so the cached versions will be reused)</li>
|
|
<li>Make sure you don’t skip a new Installation step to give execution permissions to the RAPIDS script: <code>chmod +x rapids</code></li>
|
|
<li>Move your old <code>.env</code> file</li>
|
|
<li>Move your participant files</li>
|
|
</ul>
|
|
</details>
|
|
<details class="check"><summary>Migrate your participant files</summary><p>You can migrate your old participant files to the new YAML format:
|
|
<div class="highlight"><pre><span></span><code>python tools/update_format_participant_files.py
|
|
</code></pre></div></p>
|
|
</details>
|
|
<details class="check"><summary>Follow the new Configuration guide</summary><p>Follow the new <a href="https://www.rapids.science/0.1/setup/configuration/">Configuration</a> guide</p>
|
|
</details>
|
|
<details class="check"><summary>Learn more about the new way to run RAPIDS</summary><p>Get familiar with the new way of <a href="https://www.rapids.science/0.1/setup/execution">Executing</a> RAPIDS</p>
|
|
</details>
|
|
|
|
|
|
|
|
<!-- Add custom comment system integration here -->
|
|
<!-- Utterances integration -->
|
|
|
|
<h2 id="__comments">Comments</h2>
|
|
|
|
<script type="text/javascript">
|
|
var rapids_utterances_theme = false
|
|
document.onreadystatechange = function () {
|
|
if (document.readyState == "interactive") {
|
|
// wait for utterances to load and send it's first message.
|
|
addEventListener('message', event => {
|
|
if (event.origin !== 'https://utteranc.es' || rapids_utterances_theme == true) {
|
|
return;
|
|
}
|
|
rapids_utterances_theme = true
|
|
if(document.body.getAttribute("data-md-color-scheme") == "default")
|
|
document.querySelector("iframe.utterances-frame").contentWindow.postMessage({ type: "set-theme", theme: "github-light" },"https://utteranc.es/")
|
|
else
|
|
document.querySelector("iframe.utterances-frame").contentWindow.postMessage({ type: "set-theme", theme: "photon-dark" },"https://utteranc.es/")
|
|
});
|
|
document.getElementById('__palette_1').onclick = function(){
|
|
document.querySelector("iframe.utterances-frame").contentWindow.postMessage({ type: "set-theme", theme: "github-light" },"https://utteranc.es/")
|
|
}
|
|
document.getElementById('__palette_2').onclick = function(){
|
|
document.querySelector("iframe.utterances-frame").contentWindow.postMessage({ type: "set-theme", theme: "photon-dark" },"https://utteranc.es/")
|
|
}
|
|
}
|
|
}
|
|
</script>
|
|
|
|
<script src="https://utteranc.es/client.js"
|
|
repo="carissalow/rapids"
|
|
issue-term="pathname"
|
|
label="docs comments"
|
|
theme="github-light"
|
|
crossorigin="anonymous"
|
|
async>
|
|
</script>
|
|
|
|
|
|
</article>
|
|
</div>
|
|
</div>
|
|
|
|
</main>
|
|
|
|
|
|
<footer class="md-footer">
|
|
|
|
<nav class="md-footer__inner md-grid" aria-label="Footer">
|
|
|
|
<a href="../developers/validation-schema-config/" class="md-footer__link md-footer__link--prev" rel="prev">
|
|
<div class="md-footer__button md-icon">
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M20 11v2H8l5.5 5.5-1.42 1.42L4.16 12l7.92-7.92L13.5 5.5 8 11h12z"/></svg>
|
|
</div>
|
|
<div class="md-footer__title">
|
|
<div class="md-ellipsis">
|
|
<span class="md-footer__direction">
|
|
Previous
|
|
</span>
|
|
Validation schema of config.yaml
|
|
</div>
|
|
</div>
|
|
</a>
|
|
|
|
|
|
<a href="../code_of_conduct/" class="md-footer__link md-footer__link--next" rel="next">
|
|
<div class="md-footer__title">
|
|
<div class="md-ellipsis">
|
|
<span class="md-footer__direction">
|
|
Next
|
|
</span>
|
|
Code of Conduct
|
|
</div>
|
|
</div>
|
|
<div class="md-footer__button md-icon">
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"><path d="M4 11v2h12l-5.5 5.5 1.42 1.42L19.84 12l-7.92-7.92L10.5 5.5 16 11H4z"/></svg>
|
|
</div>
|
|
</a>
|
|
|
|
</nav>
|
|
|
|
<div class="md-footer-meta md-typeset">
|
|
<div class="md-footer-meta__inner md-grid">
|
|
<div class="md-footer-copyright">
|
|
|
|
<div class="md-footer-copyright__highlight">
|
|
Released under AGPL
|
|
</div>
|
|
|
|
|
|
Made with
|
|
<a href="https://squidfunk.github.io/mkdocs-material/" target="_blank" rel="noopener">
|
|
Material for MkDocs Insiders
|
|
</a>
|
|
|
|
|
|
</div>
|
|
|
|
<div class="md-footer-social">
|
|
|
|
|
|
|
|
|
|
|
|
|
|
<a href="https://twitter.com/julio_ui" target="_blank" rel="noopener" title="twitter.com" class="md-footer-social__link">
|
|
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 512 512"><path d="M459.37 151.716c.325 4.548.325 9.097.325 13.645 0 138.72-105.583 298.558-298.558 298.558-59.452 0-114.68-17.219-161.137-47.106 8.447.974 16.568 1.299 25.34 1.299 49.055 0 94.213-16.568 130.274-44.832-46.132-.975-84.792-31.188-98.112-72.772 6.498.974 12.995 1.624 19.818 1.624 9.421 0 18.843-1.3 27.614-3.573-48.081-9.747-84.143-51.98-84.143-102.985v-1.299c13.969 7.797 30.214 12.67 47.431 13.319-28.264-18.843-46.781-51.005-46.781-87.391 0-19.492 5.197-37.36 14.294-52.954 51.655 63.675 129.3 105.258 216.365 109.807-1.624-7.797-2.599-15.918-2.599-24.04 0-57.828 46.782-104.934 104.934-104.934 30.213 0 57.502 12.67 76.67 33.137 23.715-4.548 46.456-13.32 66.599-25.34-7.798 24.366-24.366 44.833-46.132 57.827 21.117-2.273 41.584-8.122 60.426-16.243-14.292 20.791-32.161 39.308-52.628 54.253z"/></svg>
|
|
</a>
|
|
|
|
</div>
|
|
|
|
</div>
|
|
</div>
|
|
</footer>
|
|
|
|
</div>
|
|
<div class="md-dialog" data-md-component="dialog">
|
|
<div class="md-dialog__inner md-typeset"></div>
|
|
</div>
|
|
<script id="__config" type="application/json">{"base": "..", "features": ["navigation.sections", "search.suggest", "search.highlight"], "translations": {"clipboard.copy": "Copy to clipboard", "clipboard.copied": "Copied to clipboard", "search.config.lang": "en", "search.config.pipeline": "trimmer, stopWordFilter", "search.config.separator": "[\\s\\-]+", "search.placeholder": "Search", "search.result.placeholder": "Type to start searching", "search.result.none": "No matching documents", "search.result.one": "1 matching document", "search.result.other": "# matching documents", "search.result.more.one": "1 more on this page", "search.result.more.other": "# more on this page", "search.result.term.missing": "Missing"}, "search": "../assets/javascripts/workers/search.d10a1f1d.min.js", "version": {"provider": "mike"}}</script>
|
|
|
|
|
|
<script src="../assets/javascripts/bundle.9aafa2c6.min.js"></script>
|
|
|
|
<script src="https://polyfill.io/v3/polyfill.min.js?features=es6"></script>
|
|
|
|
<script src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
|
|
|
|
|
|
</body>
|
|
</html> |