1920 lines
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HTML
1920 lines
44 KiB
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You're not viewing the latest stable version of RAPIDS.
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RAPIDS
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Features
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<input type="text" class="md-search__input" name="query" aria-label="Search" placeholder="Search" autocapitalize="off" autocorrect="off" autocomplete="off" spellcheck="false" data-md-component="search-query" required>
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<div class="md-search-result__meta">
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Initializing search
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<ol class="md-search-result__list"></ol>
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<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source" data-md-component="source">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05 244 40.45a28.87 28.87 0 0 0-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 0 1-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 0 0 0 40.81l195.61 195.6a28.86 28.86 0 0 0 40.8 0l194.69-194.69a28.86 28.86 0 0 0 0-40.81z"/></svg>
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carissalow/rapids
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<nav class="md-nav md-nav--primary" aria-label="Navigation" data-md-level="0">
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<img src="../../img/logo.png" alt="logo">
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</a>
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RAPIDS
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<a href="https://github.com/carissalow/rapids/" title="Go to repository" class="md-source" data-md-component="source">
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<div class="md-source__icon md-icon">
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<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 448 512"><path d="M439.55 236.05 244 40.45a28.87 28.87 0 0 0-40.81 0l-40.66 40.63 51.52 51.52c27.06-9.14 52.68 16.77 43.39 43.68l49.66 49.66c34.23-11.8 61.18 31 35.47 56.69-26.49 26.49-70.21-2.87-56-37.34L240.22 199v121.85c25.3 12.54 22.26 41.85 9.08 55a34.34 34.34 0 0 1-48.55 0c-17.57-17.6-11.07-46.91 11.25-56v-123c-20.8-8.51-24.6-30.74-18.64-45L142.57 101 8.45 235.14a28.86 28.86 0 0 0 0 40.81l195.61 195.6a28.86 28.86 0 0 0 40.8 0l194.69-194.69a28.86 28.86 0 0 0 0-40.81z"/></svg>
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</div>
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<div class="md-source__repository">
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carissalow/rapids
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</div>
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</a>
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</div>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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<a href="../.." class="md-nav__link">
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Home
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<label class="md-nav__link" for="__nav_2">
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Setup
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<span class="md-nav__icon md-icon"></span>
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<nav class="md-nav" aria-label="Setup" data-md-level="1">
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<label class="md-nav__title" for="__nav_2">
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<span class="md-nav__icon md-icon"></span>
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Setup
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</label>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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<a href="../../setup/overview/" class="md-nav__link">
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Overview
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</a>
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</li>
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<li class="md-nav__item">
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<a href="../../workflow-examples/minimal/" class="md-nav__link">
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Minimal Example
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</a>
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<li class="md-nav__item">
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<a href="../../setup/installation/" class="md-nav__link">
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Installation
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</a>
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<li class="md-nav__item">
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<a href="../../setup/configuration/" class="md-nav__link">
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Configuration
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</a>
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</li>
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<li class="md-nav__item">
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<a href="../../setup/execution/" class="md-nav__link">
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Execution
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</a>
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</li>
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<li class="md-nav__item">
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<a href="../../citation/" class="md-nav__link">
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Citation
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</ul>
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</nav>
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<li class="md-nav__item md-nav__item--section md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3" type="checkbox" id="__nav_3" >
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<label class="md-nav__link" for="__nav_3">
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Data Streams
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<span class="md-nav__icon md-icon"></span>
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</label>
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<nav class="md-nav" aria-label="Data Streams" data-md-level="1">
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<label class="md-nav__title" for="__nav_3">
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<span class="md-nav__icon md-icon"></span>
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Data Streams
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</label>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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<a href="../../datastreams/data-streams-introduction/" class="md-nav__link">
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Introduction
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</a>
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</li>
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<li class="md-nav__item md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_2" type="checkbox" id="__nav_3_2" >
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<label class="md-nav__link" for="__nav_3_2">
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Phone
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<span class="md-nav__icon md-icon"></span>
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</label>
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<nav class="md-nav" aria-label="Phone" data-md-level="2">
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<label class="md-nav__title" for="__nav_3_2">
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<span class="md-nav__icon md-icon"></span>
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Phone
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</label>
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<ul class="md-nav__list" data-md-scrollfix>
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<li class="md-nav__item">
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<a href="../../datastreams/aware-mysql/" class="md-nav__link">
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aware_mysql
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</a>
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</li>
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||
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<li class="md-nav__item">
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||
<a href="../../datastreams/aware-csv/" class="md-nav__link">
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aware_csv
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</a>
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</li>
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||
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<li class="md-nav__item">
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||
<a href="../../datastreams/aware-influxdb/" class="md-nav__link">
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aware_influxdb (beta)
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</a>
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</li>
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||
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<li class="md-nav__item">
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||
<a href="../../datastreams/mandatory-phone-format/" class="md-nav__link">
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Mandatory Phone Format
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</a>
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</li>
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</ul>
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</nav>
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</li>
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<li class="md-nav__item md-nav__item--nested">
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<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_3" type="checkbox" id="__nav_3_3" >
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<label class="md-nav__link" for="__nav_3_3">
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Fitbit
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<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Fitbit" data-md-level="2">
|
||
<label class="md-nav__title" for="__nav_3_3">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Fitbit
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/fitbitjson-mysql/" class="md-nav__link">
|
||
fitbitjson_mysql
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/fitbitjson-csv/" class="md-nav__link">
|
||
fitbitjson_csv
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/fitbitparsed-mysql/" class="md-nav__link">
|
||
fitbitparsed_mysql
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/fitbitparsed-csv/" class="md-nav__link">
|
||
fitbitparsed_csv
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/mandatory-fitbit-format/" class="md-nav__link">
|
||
Mandatory Fitbit Format
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item md-nav__item--nested">
|
||
|
||
|
||
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_3_4" type="checkbox" id="__nav_3_4" >
|
||
|
||
|
||
|
||
|
||
<label class="md-nav__link" for="__nav_3_4">
|
||
Empatica
|
||
<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Empatica" data-md-level="2">
|
||
<label class="md-nav__title" for="__nav_3_4">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Empatica
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/empatica-zip/" class="md-nav__link">
|
||
empatica_zip
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/mandatory-empatica-format/" class="md-nav__link">
|
||
Mandatory Empatica Format
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../datastreams/add-new-data-streams/" class="md-nav__link">
|
||
Add New Data Streams
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item md-nav__item--section md-nav__item--nested">
|
||
|
||
|
||
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4" type="checkbox" id="__nav_4" >
|
||
|
||
|
||
|
||
|
||
<label class="md-nav__link" for="__nav_4">
|
||
Behavioral Features
|
||
<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Behavioral Features" data-md-level="1">
|
||
<label class="md-nav__title" for="__nav_4">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Behavioral Features
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/feature-introduction/" class="md-nav__link">
|
||
Introduction
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item md-nav__item--nested">
|
||
|
||
|
||
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_2" type="checkbox" id="__nav_4_2" >
|
||
|
||
|
||
|
||
|
||
<label class="md-nav__link" for="__nav_4_2">
|
||
Phone
|
||
<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Phone" data-md-level="2">
|
||
<label class="md-nav__title" for="__nav_4_2">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Phone
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-accelerometer/" class="md-nav__link">
|
||
Phone Accelerometer
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-activity-recognition/" class="md-nav__link">
|
||
Phone Activity Recognition
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-applications-crashes/" class="md-nav__link">
|
||
Phone Applications Crashes
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-applications-foreground/" class="md-nav__link">
|
||
Phone Applications Foreground
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-applications-notifications/" class="md-nav__link">
|
||
Phone Applications Notifications
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-battery/" class="md-nav__link">
|
||
Phone Battery
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-bluetooth/" class="md-nav__link">
|
||
Phone Bluetooth
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-calls/" class="md-nav__link">
|
||
Phone Calls
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-conversation/" class="md-nav__link">
|
||
Phone Conversation
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-data-yield/" class="md-nav__link">
|
||
Phone Data Yield
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-keyboard/" class="md-nav__link">
|
||
Phone Keyboard
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-light/" class="md-nav__link">
|
||
Phone Light
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-locations/" class="md-nav__link">
|
||
Phone Locations
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-log/" class="md-nav__link">
|
||
Phone Log
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-messages/" class="md-nav__link">
|
||
Phone Messages
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-screen/" class="md-nav__link">
|
||
Phone Screen
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-wifi-connected/" class="md-nav__link">
|
||
Phone WiFI Connected
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/phone-wifi-visible/" class="md-nav__link">
|
||
Phone WiFI Visible
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item md-nav__item--nested">
|
||
|
||
|
||
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_3" type="checkbox" id="__nav_4_3" >
|
||
|
||
|
||
|
||
|
||
<label class="md-nav__link" for="__nav_4_3">
|
||
Fitbit
|
||
<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Fitbit" data-md-level="2">
|
||
<label class="md-nav__title" for="__nav_4_3">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Fitbit
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-calories-intraday/" class="md-nav__link">
|
||
Fitbit Calories Intraday
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-data-yield/" class="md-nav__link">
|
||
Fitbit Data Yield
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-heartrate-summary/" class="md-nav__link">
|
||
Fitbit Heart Rate Summary
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-heartrate-intraday/" class="md-nav__link">
|
||
Fitbit Heart Rate Intraday
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-sleep-summary/" class="md-nav__link">
|
||
Fitbit Sleep Summary
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-sleep-intraday/" class="md-nav__link">
|
||
Fitbit Sleep Intraday
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-steps-summary/" class="md-nav__link">
|
||
Fitbit Steps Summary
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/fitbit-steps-intraday/" class="md-nav__link">
|
||
Fitbit Steps Intraday
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item md-nav__item--nested">
|
||
|
||
|
||
<input class="md-nav__toggle md-toggle" data-md-toggle="__nav_4_4" type="checkbox" id="__nav_4_4" >
|
||
|
||
|
||
|
||
|
||
<label class="md-nav__link" for="__nav_4_4">
|
||
Empatica
|
||
<span class="md-nav__icon md-icon"></span>
|
||
</label>
|
||
|
||
<nav class="md-nav" aria-label="Empatica" data-md-level="2">
|
||
<label class="md-nav__title" for="__nav_4_4">
|
||
<span class="md-nav__icon md-icon"></span>
|
||
Empatica
|
||
</label>
|
||
<ul class="md-nav__list" data-md-scrollfix>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-accelerometer/" class="md-nav__link">
|
||
Empatica Accelerometer
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-heartrate/" class="md-nav__link">
|
||
Empatica Heart Rate
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-temperature/" class="md-nav__link">
|
||
Empatica Temperature
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-electrodermal-activity/" class="md-nav__link">
|
||
Empatica Electrodermal Activity
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-blood-volume-pulse/" class="md-nav__link">
|
||
Empatica Blood Volume Pulse
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-inter-beat-interval/" class="md-nav__link">
|
||
Empatica Inter Beat Interval
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/empatica-tags/" class="md-nav__link">
|
||
Empatica Tags
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<li class="md-nav__item">
|
||
<a href="../../features/add-new-features/" class="md-nav__link">
|
||
Add New Features
|
||
</a>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
</ul>
|
||
</nav>
|
||
</li>
|
||
|
||
|
||
|
||
|
||
|
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<h1 id="feature-visualizations">Feature Visualizations<a class="headerlink" href="#feature-visualizations" title="Permanent link">¶</a></h1>
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<h2 id="1-heatmap-correlation-matrix">1. Heatmap Correlation Matrix<a class="headerlink" href="#1-heatmap-correlation-matrix" title="Permanent link">¶</a></h2>
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<p>Columns and rows are the behavioral features computed in RAPIDS, cells’ color represents the correlation coefficient between all days of data for every pair of features of all participants. </p>
|
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<p>The user can specify a minimum number of observations (<a href="../../setup/configuration#time-segments">time segment</a> instances) required to compute the correlation between two features using the <code>MIN_ROWS_RATIO</code> parameter (0.5 by default) and the correlation method (Pearson, Spearman or Kendall) with the <code>CORR_METHOD</code> parameter. In addition, this plot can be configured to only display correlation coefficients above a threshold using the <code>CORR_THRESHOLD</code> parameter (0.1 by default).</p>
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<script src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
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