def input_merge_metrics_of_single_participant(wildcards): if wildcards.source == "phone_fitbit_metrics": return expand("data/processed/{pid}/{metrics}_{day_segment}.csv", pid=wildcards.pid, metrics=config["METRICS_FOR_ANALYSIS"]["PHONE_METRICS"] + config["METRICS_FOR_ANALYSIS"]["FITBIT_METRICS"], day_segment=wildcards.day_segment) else: return expand("data/processed/{pid}/{metrics}_{day_segment}.csv", pid=wildcards.pid, metrics=config["METRICS_FOR_ANALYSIS"][wildcards.source.upper()], day_segment=wildcards.day_segment) rule merge_metrics_of_single_participant: input: metric_files = input_merge_metrics_of_single_participant output: "models/input/merged_single_participant/{pid}/{source}_{day_segment}.csv" script: "../src/models/merge_metrics_of_single_participant.R" rule merge_metrics_of_all_participants: input: metric_files = expand("models/input/merged_single_participant/{pid}/{{source}}_{{day_segment}}.csv", pid=config["PIDS"]) output: "models/input/merged_all_participants/{source}_{day_segment}.csv" script: "../src/models/merge_metrics_of_all_participants.R"