source("packrat/init.R") library(dplyr) sms <- read.csv(snakemake@input[[1]]) day_segment <- snakemake@params[["day_segment"]] metric <- snakemake@params[["metric"]] sms_type <- snakemake@params[["sms_type"]] output_file <- snakemake@output[[1]] metrics <- sms %>% filter(message_type == ifelse(sms_type == "received", "1", "2")) if(day_segment == "daily"){ metrics <- metrics %>% group_by(local_date) } else { metrics <- metrics %>% filter(day_segment == local_day_segment) %>% group_by(local_date) } metrics <- switch(metric, "count" = metrics %>% summarise(!!paste("com", "sms", sms_type, day_segment, metric, sep = "_") := n()), "distinctcontacts" = metrics %>% summarise(!!paste("com", "sms", sms_type, day_segment, metric, sep = "_") := n_distinct(trace))) write.csv(na.omit(metrics), output_file, row.names = F)