from esm_preprocess import * df_esm = pd.read_csv(snakemake.input[0]) df_esm_preprocessed = preprocess_esm(df_esm) # TODO Enable getting the right questionnaire here. df_esm_PANAS = df_esm_preprocessed[ (df_esm_preprocessed["questionnaire_id"] == 8) | (df_esm_preprocessed["questionnaire_id"] == 9) ] df_esm_clean = clean_up_esm(df_esm_PANAS) df_esm_clean.to_csv(snakemake.output[0])