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Travis testing attempt 3

pull/95/head
kaguillera 2020-04-30 11:12:29 -04:00
parent 2720b24c0a
commit f33fe20cef
1 changed files with 2 additions and 1 deletions
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.travis.yml
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@ -9,17 +9,18 @@ before_script:
- snakemake packrat_restore - snakemake packrat_restore
install: install:
- R -e 'install.packages(c( "rmarkdown"), repos = "http://cran.us.r-project.org")'
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh; - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
- bash miniconda.sh -b -p $HOME/miniconda - bash miniconda.sh -b -p $HOME/miniconda
- source "$HOME/miniconda/bin:$PATH" - source "$HOME/miniconda/bin:$PATH"
- hash -r - hash -r
- conda config --set always_yes yes --set changeps1 no - conda config --set always_yes yes --set changeps1 no
- conda update -q conda - conda update -q conda
- conda config --add channels r
# Useful for debugging any issues with conda # Useful for debugging any issues with conda
- conda info -a - conda info -a
# Replace dep1 dep2 ... with your dependencies # Replace dep1 dep2 ... with your dependencies
- R -e 'install.packages(c( "rmarkdown"), repos = "http://cran.us.r-project.org")'
- conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml - conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
- conda activate test-environment - conda activate test-environment