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Changes in AutoML params and environment.yml

notes
Primoz 2022-09-13 13:54:06 +00:00
parent 4ec371ed96
commit dfbb758902
2 changed files with 29 additions and 4 deletions
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4
automl_test.py
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@ -39,8 +39,8 @@ model_in.set_index(index_columns, inplace=True)
X_train, X_test, y_train, y_test = train_test_split(model_in.drop(["target", "pid"], axis=1), model_in["target"], test_size=0.20) X_train, X_test, y_train, y_test = train_test_split(model_in.drop(["target", "pid"], axis=1), model_in["target"], test_size=0.20)
automl = autosklearn.regression.AutoSklearnRegressor( automl = autosklearn.regression.AutoSklearnRegressor(
time_left_for_this_task=1200, time_left_for_this_task=36000,
per_run_time_limit=60 per_run_time_limit=120
) )
automl.fit(X_train, y_train, dataset_name='straw') automl.fit(X_train, y_train, dataset_name='straw')

29
environment.yml
View File

@ -86,8 +86,6 @@ dependencies:
- readline=8.0 - readline=8.0
- requests=2.25.0 - requests=2.25.0
- retrying=1.3.3 - retrying=1.3.3
- scikit-learn=0.23.2
- scipy=1.5.2
- setuptools=51.0.0 - setuptools=51.0.0
- six=1.15.0 - six=1.15.0
- smmap=3.0.4 - smmap=3.0.4
@ -107,34 +105,61 @@ dependencies:
- zlib=1.2.11 - zlib=1.2.11
- pip: - pip:
- amply==0.1.4 - amply==0.1.4
- auto-sklearn==0.14.7
- bidict==0.22.0 - bidict==0.22.0
- biosppy==0.8.0 - biosppy==0.8.0
- build==0.8.0
- cached-property==1.5.2 - cached-property==1.5.2
- cloudpickle==2.2.0
- configargparse==0.15.1 - configargparse==0.15.1
- configspace==0.4.21
- cr-features==0.2.1 - cr-features==0.2.1
- cycler==0.11.0 - cycler==0.11.0
- cython==0.29.32
- dask==2022.2.0
- decorator==4.4.2 - decorator==4.4.2
- distributed==2022.2.0
- distro==1.7.0
- emcee==3.1.2
- fonttools==4.33.2 - fonttools==4.33.2
- fsspec==2022.8.2
- h5py==3.6.0 - h5py==3.6.0
- heapdict==1.0.1
- hmmlearn==0.2.7 - hmmlearn==0.2.7
- ipython-genutils==0.2.0 - ipython-genutils==0.2.0
- jupyter-core==4.6.3 - jupyter-core==4.6.3
- kiwisolver==1.4.2 - kiwisolver==1.4.2
- liac-arff==2.5.0
- locket==1.0.0
- matplotlib==3.5.1 - matplotlib==3.5.1
- msgpack==1.0.4
- nbformat==5.0.7 - nbformat==5.0.7
- opencv-python==4.5.5.64 - opencv-python==4.5.5.64
- packaging==21.3 - packaging==21.3
- partd==1.3.0
- peakutils==1.3.3 - peakutils==1.3.3
- pep517==0.13.0
- pillow==9.1.0 - pillow==9.1.0
- pulp==2.4 - pulp==2.4
- pynisher==0.6.4
- pyparsing==2.4.7 - pyparsing==2.4.7
- pyrfr==0.8.3
- pyrsistent==0.15.5 - pyrsistent==0.15.5
- pywavelets==1.3.0 - pywavelets==1.3.0
- ratelimiter==1.2.0.post0 - ratelimiter==1.2.0.post0
- scikit-learn==0.24.2
- scipy==1.7.3
- seaborn==0.11.2 - seaborn==0.11.2
- shortuuid==1.0.8 - shortuuid==1.0.8
- smac==1.2
- snakemake==5.30.2 - snakemake==5.30.2
- sortedcontainers==2.4.0
- tblib==1.7.0
- tomli==2.0.1
- toolz==0.12.0
- toposort==1.5 - toposort==1.5
- tornado==6.2
- traitlets==4.3.3 - traitlets==4.3.3
- typing-extensions==4.2.0 - typing-extensions==4.2.0
- zict==2.2.0
prefix: /opt/conda/envs/rapids prefix: /opt/conda/envs/rapids