Fix Travis testing on master
parent
aa1baaf948
commit
bdcaf5a9c1
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@ -58,10 +58,8 @@ install:
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- snakemake renv_restore
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- snakemake renv_restore
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script:
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script:
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- cp -r tests/data/raw/* data/raw
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- bash tests/scripts/run_tests.sh
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- snakemake --profile tests/settings
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- python -m unittest discover tests/scripts/ -v
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notifications:
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notifications:
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email: false
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email: false
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slack:
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slack:
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@ -0,0 +1,4 @@
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wYESbVwI-4GfR-G5I6-7iKL-tOmCKs02MBun
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android
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test01 android
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2020/01/01,2020/06/01
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@ -0,0 +1,9 @@
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#!/bin/bash
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# Commmands necessary to setup and run the tests for RAPIDS
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cp -r tests/data/raw/* data/raw
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cp tests/data/external/* data/external
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sed -e '10,20 s/^/#/' -e 's/rules.download_dataset.output/"data\/raw\/\{pid\}\/\{sensor\}_raw\.csv"/' rules/preprocessing.snakefile > tmp
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cp tmp rules/preprocessing.snakefile
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snakemake --profile tests/settings
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python -m unittest discover tests/scripts/ -v
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@ -90,7 +90,10 @@ def generate_sensor_file_lists(configs):
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for sensor in sensors:
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for sensor in sensors:
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if sensor == 'messages':
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if sensor == 'messages':
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sensor = 'sms'
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sensor = 'sms'
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sensor_cap = 'SMS'
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sensor_cap = sensor.upper()
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elif sensor == 'calls':
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sensor_cap = sensor.upper()
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sensor = 'call'
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else:
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else:
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sensor_cap = sensor.upper()
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sensor_cap = sensor.upper()
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if 'DAY_SEGMENTS' in configs[sensor_cap]:
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if 'DAY_SEGMENTS' in configs[sensor_cap]:
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