Fix Travis testing on master

.travis.yml

@@ -58,9 +58,7 @@ install:
   - snakemake renv_restore 
     
 script:
-  - cp -r tests/data/raw/* data/raw
+  - bash tests/scripts/run_tests.sh
-  - snakemake --profile tests/settings
-  - python -m unittest discover tests/scripts/ -v
   
 notifications:
   email: false

tests/data/external/test01

@@ -0,0 +1,4 @@
+wYESbVwI-4GfR-G5I6-7iKL-tOmCKs02MBun
+android
+test01 android
+2020/01/01,2020/06/01 

tests/scripts/run_tests.sh

@@ -0,0 +1,9 @@
+#!/bin/bash
+# Commmands necessary to setup and run the tests for RAPIDS
+
+cp -r tests/data/raw/* data/raw
+cp tests/data/external/* data/external 
+sed -e '10,20 s/^/#/' -e  's/rules.download_dataset.output/"data\/raw\/\{pid\}\/\{sensor\}_raw\.csv"/' rules/preprocessing.snakefile > tmp
+cp tmp rules/preprocessing.snakefile
+snakemake --profile tests/settings
+python -m unittest discover tests/scripts/ -v 

tests/scripts/utils.py

@@ -90,7 +90,10 @@ def generate_sensor_file_lists(configs):
     for sensor in sensors:
         if sensor == 'messages':
             sensor = 'sms'
-            sensor_cap = 'SMS'
+            sensor_cap = sensor.upper()
+        elif sensor == 'calls':
+            sensor_cap = sensor.upper()
+            sensor = 'call'
         else:
             sensor_cap = sensor.upper()
         if 'DAY_SEGMENTS' in configs[sensor_cap]: