From b7e22b74409b3d4f06b4d73fbf0b7e5ca22a7d2e Mon Sep 17 00:00:00 2001
From: Meng Li <34143965+Meng6@users.noreply.github.com>
Date: Wed, 11 Nov 2020 20:23:41 -0500
Subject: [PATCH] Fix fitbit_parse_heartrate rule's table parameter

---
 rules/preprocessing.smk | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/rules/preprocessing.smk b/rules/preprocessing.smk
index 6caa05fb..b2da8756 100644
--- a/rules/preprocessing.smk
+++ b/rules/preprocessing.smk
@@ -185,7 +185,7 @@ rule fitbit_parse_heartrate:
         "data/raw/{pid}/fitbit_heartrate_{fitbit_data_type}_raw.csv"
     params:
         timezone = config["DEVICE_DATA"]["PHONE"]["TIMEZONE"]["VALUE"],
-        table = config["FITBIT_HEARTRATE"]["TABLE"],
+        table = lambda wildcards: config["FITBIT_HEARTRATE_"+str(wildcards.fitbit_data_type).upper()]["TABLE"],
         column_format = config["DEVICE_DATA"]["FITBIT"]["SOURCE"]["COLUMN_FORMAT"],
         fitbit_data_type = "{fitbit_data_type}"
     output: