Travis testing attempt 3.4
parent
97c6158dc5
commit
a3d6b0899c
13
.travis.yml
13
.travis.yml
|
@ -8,8 +8,14 @@ before_script:
|
||||||
- snakemake packrat_init
|
- snakemake packrat_init
|
||||||
- snakemake packrat_restore
|
- snakemake packrat_restore
|
||||||
|
|
||||||
install:
|
before_install:
|
||||||
- sudo apt-get install -y r-base
|
- sudo apt-get install -y r-base
|
||||||
|
|
||||||
|
r_binary_packages:
|
||||||
|
- rmarkdown
|
||||||
|
|
||||||
|
install:
|
||||||
|
|
||||||
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
|
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
|
||||||
- bash miniconda.sh -b -p $HOME/miniconda
|
- bash miniconda.sh -b -p $HOME/miniconda
|
||||||
- source "$HOME/miniconda/etc/profile.d/conda.sh"
|
- source "$HOME/miniconda/etc/profile.d/conda.sh"
|
||||||
|
@ -21,12 +27,9 @@ install:
|
||||||
|
|
||||||
# Replace dep1 dep2 ... with your dependencies
|
# Replace dep1 dep2 ... with your dependencies
|
||||||
|
|
||||||
- conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
|
- conda env create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
|
||||||
- conda activate test-environment
|
- conda activate test-environment
|
||||||
|
|
||||||
r_binary_packages:
|
|
||||||
- rmarkdown
|
|
||||||
|
|
||||||
services:
|
services:
|
||||||
- mysql
|
- mysql
|
||||||
|
|
||||||
|
|
Loading…
Reference in New Issue