Travis testing attempt 3.4

.travis.yml

@@ -8,8 +8,14 @@ before_script:
   - snakemake packrat_init
   - snakemake packrat_restore
 
-install:
+before_install:
   - sudo apt-get install -y r-base
+
+r_binary_packages:
+  - rmarkdown
+
+install:
+
   - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
   - bash miniconda.sh -b -p $HOME/miniconda
   - source "$HOME/miniconda/etc/profile.d/conda.sh"
@@ -21,12 +27,9 @@ install:
 
   # Replace dep1 dep2 ... with your dependencies
 
-  - conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
+  - conda env create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
   - conda activate test-environment
 
-r_binary_packages:
-  - rmarkdown
-
 services: 
   - mysql