Add an else.
This is to make sure that in case the reversing fails, we do not get any output items. Snakemake will inform us of an error in this event.labels
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916bb21a53
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9478dc94f2
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@ -15,5 +15,7 @@ else:
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df_esm_selected = df_esm_preprocessed[df_esm_preprocessed["questionnaire_id"] == questionnaire_id]
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df_esm_selected = df_esm_preprocessed[df_esm_preprocessed["questionnaire_id"] == questionnaire_id]
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df_esm_clean = clean_up_esm(df_esm_selected)
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df_esm_clean = clean_up_esm(df_esm_selected)
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if questionnaire_name.startswith("JCQ"):
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if questionnaire_name.startswith("JCQ"):
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df_esm_clean = reverse_jcq_demand_control_scoring(df_esm_clean)
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df_esm_reversed = reverse_jcq_demand_control_scoring(df_esm_clean)
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df_esm_clean.to_csv(snakemake.output[0])
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df_esm_reversed.to_csv(snakemake.output[0])
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else:
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df_esm_clean.to_csv(snakemake.output[0])
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