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Testing Slack notification for Travis

pull/95/head
kaguillera 2020-05-01 17:17:00 -04:00
parent 9be1fb8c76
commit 880437e1d7
1 changed files with 28 additions and 32 deletions
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.travis.yml
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@ -1,38 +1,34 @@
services: services:
- mysql - mysql
language: python language: python
python: python:
- "3.7" - '3.7'
before_install: before_install:
- sudo add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu xenial-cran40/' - sudo add-apt-repository 'deb https://cloud.r-project.org/bin/linux/ubuntu xenial-cran40/'
- sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9 - sudo apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E084DAB9
# - sudo apt-get update - sudo apt-get install -y r-base r-base-dev
- sudo apt-get install -y r-base r-base-dev - sudo chmod ugo+rw /usr/local/lib/R/site-library
- sudo chmod ugo+rw /usr/local/lib/R/site-library - R -e 'install.packages(c( "rmarkdown"), repos = "http://cran.us.r-project.org")'
- R -e 'install.packages(c( "rmarkdown"), repos = "http://cran.us.r-project.org")'
install: install:
- wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh; - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
- bash miniconda.sh -b -p $HOME/miniconda - bash miniconda.sh -b -p $HOME/miniconda
- source "$HOME/miniconda/etc/profile.d/conda.sh" - source "$HOME/miniconda/etc/profile.d/conda.sh"
- hash -r - hash -r
- conda config --set always_yes yes --set changeps1 no - conda config --set always_yes yes --set changeps1 no
- conda update -q conda - conda update -q conda
# Useful for debugging any issues with conda - conda info -a
- conda info -a - conda env create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
- conda activate test-environment
- conda env create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file environment.yml
- conda activate test-environment
before_script: before_script:
# Install Packrat - snakemake packrat_install
- snakemake packrat_install - snakemake packrat_init
- snakemake packrat_init - snakemake packrat_restore
- snakemake packrat_restore
script: script:
- cp -r tests/data/raw/* data/raw - cp -r tests/data/raw/* data/raw
- snakemake --profile tests/settings -R sms_features - snakemake --profile tests/settings -R sms_features
- python -m unittest discover tests/scripts/ -v - python -m unittest discover tests/scripts/ -v
notifications:
slack:
secure: 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
on_success: always