From 53f6cc60d5d8262a3bbb3cad82e2ebf49cb9e2a5 Mon Sep 17 00:00:00 2001
From: Primoz <sisko.primoz@gmail.com>
Date: Mon, 3 Oct 2022 13:06:39 +0000
Subject: [PATCH] Config and cleaning script necessary changes ...

---
 config.yaml                                     | 2 +-
 src/features/all_cleaning_overall/straw/main.py | 2 --
 2 files changed, 1 insertion(+), 3 deletions(-)

diff --git a/config.yaml b/config.yaml
index 64a1eb57..23d7e82b 100644
--- a/config.yaml
+++ b/config.yaml
@@ -3,7 +3,7 @@
 ########################################################################################################################
 
 # See https://www.rapids.science/latest/setup/configuration/#participant-files
-PIDS: ['p01'] #['p031', 'p032', 'p033', 'p034', 'p035', 'p036', 'p037', 'p038', 'p039', 'p040', 'p042', 'p043', 'p044', 'p045', 'p046', 'p049', 'p050', 'p052', 'p053', 'p054', 'p055', 'p057', 'p058', 'p059', 'p060', 'p061', 'p062', 'p064', 'p067', 'p068', 'p069', 'p070', 'p071', 'p072', 'p073', 'p074', 'p075', 'p076', 'p077', 'p078', 'p079', 'p080', 'p081', 'p082', 'p083', 'p084', 'p085', 'p086', 'p088', 'p089', 'p090', 'p091', 'p092', 'p093', 'p106', 'p107']
+PIDS: ['p031', 'p032', 'p033', 'p034', 'p035', 'p036', 'p037', 'p038', 'p039', 'p040', 'p042', 'p043', 'p044', 'p045', 'p046', 'p049', 'p050', 'p052', 'p053', 'p054', 'p055', 'p057', 'p058', 'p059', 'p060', 'p061', 'p062', 'p064', 'p067', 'p068', 'p069', 'p070', 'p071', 'p072', 'p073', 'p074', 'p075', 'p076', 'p077', 'p078', 'p079', 'p080', 'p081', 'p082', 'p083', 'p084', 'p085', 'p086', 'p088', 'p089', 'p090', 'p091', 'p092', 'p093', 'p106', 'p107']
 
 # See https://www.rapids.science/latest/setup/configuration/#automatic-creation-of-participant-files
 CREATE_PARTICIPANT_FILES:
diff --git a/src/features/all_cleaning_overall/straw/main.py b/src/features/all_cleaning_overall/straw/main.py
index 57869da8..b07f9403 100644
--- a/src/features/all_cleaning_overall/straw/main.py
+++ b/src/features/all_cleaning_overall/straw/main.py
@@ -39,7 +39,6 @@ def straw_cleaning(sensor_data_files, provider):
 
     if not phone_data_yield_column in features.columns and not "empatica_data_yield" in features.columns:
         raise KeyError(f"RAPIDS provider needs to clean the selected event features based on {phone_data_yield_column} and empatica_data_yield columns. For phone data yield, please set config[PHONE_DATA_YIELD][PROVIDERS][RAPIDS][COMPUTE] to True and include 'ratiovalidyielded{data_yield_unit}' in [FEATURES].")
-        
 
     hist = features[["empatica_data_yield", phone_data_yield_column]].hist()
     plt.legend()
@@ -59,7 +58,6 @@ def straw_cleaning(sensor_data_files, provider):
         print(features["empatica_data_yield"].sort_values())
         features = features[features["empatica_data_yield"] >= provider["EMPATICA_DATA_YIELD_RATIO_THRESHOLD"]].reset_index(drop=True)
 
-    sys.exit()
     graph_bf_af(features, "3data_yield_drop_rows")
     
     # (2.2) DO THE ROWS CONSIST OF ENOUGH NON-NAN VALUES?