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Fix parse of pids with more than 1 devices

pull/134/head
JulioV 2021-05-11 16:42:20 -04:00
parent b3c05128fa
commit 32818a4802
1 changed files with 6 additions and 3 deletions
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7
src/data/create_participants_files.R
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@ -25,8 +25,10 @@ participants <- read_csv(config$CSV_FILE_PATH, col_types=cols_only(device_id="c"
start_date=col_datetime(),end_date=col_datetime(),fitbit_id="c",empatica_id="c")) %>%
mutate(start_date = as.character(start_date), end_date = as.character(end_date)) # we read as date to validate format
participants <- participants %>%
mutate(!!phone_device_id_column := str_replace(!!rlang::sym(phone_device_id_column), ";",","),
platform = str_replace(platform, ";",","),
mutate(!!phone_device_id_column := str_replace_all(!!rlang::sym(phone_device_id_column), ";",","),
!!fitbit_device_id_column := str_replace_all(!!rlang::sym(fitbit_device_id_column), ";",","),
!!empatica_device_id_column := str_replace_all(!!rlang::sym(empatica_device_id_column), ";",","),
platform = str_replace_all(platform, ";",","),
!!phone_device_id_column := if_else(!!rlang::sym(phone_device_id_column) %in% phone_ignored, NA_character_, !!rlang::sym(phone_device_id_column)),
!!empatica_device_id_column := if_else(!!rlang::sym(empatica_device_id_column) %in% empatica_ignored, NA_character_, !!rlang::sym(empatica_device_id_column)),
!!fitbit_device_id_column := if_else(!!rlang::sym(fitbit_device_id_column) %in% fitbit_ignored, NA_character_, !!rlang::sym(fitbit_device_id_column)))
@ -60,6 +62,7 @@ participants %>%
paste(" LABEL:",row$label), paste(" START_DATE:", start_date), paste(" END_DATE:", end_date)))
} else
lines <- append(lines, empty_empatica)
lines <- append(lines, "\n")
file_connection <- file(paste0("./data/external/participant_files/", row$pid, ".yaml"))
writeLines(lines, file_connection)