diff --git a/.travis.yml b/.travis.yml index d50cc0b3..98421603 100644 --- a/.travis.yml +++ b/.travis.yml @@ -40,37 +40,6 @@ jobs: - "$TRAVIS_BUILD_DIR/renv/library" script: - bash tests/scripts/run_tests.sh all test - - name: Python 3.7 on macOS - os: osx - osx_image: xcode11.3 - language: generic - before_install: - - HOMEBREW_NO_AUTO_UPDATE=1 brew install gcc@9 - - HOMEBREW_NO_AUTO_UPDATE=1 brew install https://github.com/Homebrew/homebrew-core/raw/218998d/Formula/r.rb - - R --version - - HOMEBREW_NO_AUTO_UPDATE=1 brew install mysql - - HOMEBREW_NO_AUTO_UPDATE=1 brew services start mysql - - HOMEBREW_NO_AUTO_UPDATE=1 brew cask install miniconda - - eval "$(/opt/miniconda3/condabin/conda shell.bash hook)" - - eval "$(conda shell.bash hook)" - install: - - conda init bash - - conda update -q --all --yes conda - - conda env create -q -n test-environment python=$TRAVIS_PYTHON_VERSION --file - environment.yml - - conda activate test-environment - - snakemake -j1 renv_install - - R -e 'renv::settings$use.cache(FALSE)' - - snakemake -j1 renv_restore - env: - - RENV_PATHS_ROOT="$HOME/renv/cache" - cache: - directories: - - "/usr/local/lib/R" - - "$RENV_PATHS_ROOT" - - "$TRAVIS_BUILD_DIR/renv/library" - script: - - bash tests/scripts/run_tests.sh all test - stage: deploy name: Python 3.7 on Xenial Linux Docker os: linux