rapids/src/data/compute_day_segments.py

92 lines
3.6 KiB
Python
Raw Normal View History

import pandas as pd
def is_valid_frequency_segments(day_segments):
"""
returns true if day_segment has the expected structure for generating frequency segments
"""
if day_segments is None:
return False
if day_segments.shape[0] == 0:
return False
if day_segments.shape[0] > 1:
return False
if 'length' not in day_segments.columns:
return False
if 'label' not in day_segments.columns:
return False
if not pd.api.types.is_integer_dtype(day_segments.dtypes['length']):
return False
if day_segments.iloc[0].loc['length'] < 0:
return False
if day_segments.iloc[0].loc['length'] >= 1440:
return False
return True
def is_valid_interval_segments(day_segments):
return True
def is_valid_event_segments(day_segments):
return False
def parse_frequency_segments(day_segments: pd.DataFrame) -> pd.DataFrame:
"""
returns a table with row identifying start and end of time slots with frequency freq (in minutes). For example,
for freq = 10 it outputs
bin_id start end label
0 00:00 00:10 epoch_0000
1 00:10 00:20 epoch_0001
2 00:20 00:30 epoch_0002
...
143 23:50 00:00 epoch_0143
"""
freq = day_segments.iloc[0].loc['length']
slots = pd.date_range(start='2020-01-01', end='2020-01-02', freq='{}min'.format(freq))
slots = ['{:02d}:{:02d}'.format(x.hour, x.minute) for x in slots]
table = pd.DataFrame(slots, columns=['start'])
table['end'] = table['start'].shift(-1)
table = table.iloc[:-1, :]
label = day_segments.loc[0, 'label']
table['label'] = range(0, table.shape[0])
table['label'] = table['label'].apply(lambda x: '{}_{:04}'.format(label, x))
table['local_date'] = None
return table[['local_date', 'start', 'end', 'label']]
def parse_interval_segments(day_segments):
day_segments["local_date"] = 1
day_segments = day_segments.rename(columns={"start": "start_time", "end":"end_time"})
return day_segments
def parse_event_segments(day_segments):
return day_segments
def parse_day_segments(day_segments_file):
# Add code to validate and parse frequencies, intervals, and events
2020-07-23 18:00:51 +02:00
# Expected formats:
# Frequency: label, length columns (e.g. my_prefix, 5) length has to be in minutes (int)
# Interval: label, start, end columns (e.g. daily, 00:00, 23:59) start and end should be valid hours in 24 hour format
# Event: label, timestamp, length, shift (e.g., survey1, 1532313215463, 60, -30), timestamp is a UNIX timestamp in ms (we could take a date time string instead), length is in minutes (int), shift is in minutes (+/-int) and is added/substracted from timestamp
2020-07-23 18:00:51 +02:00
# Our output should have local_date, start_time, end_time, label. In the readable_datetime script, If local_date has the same value for all rows, every segment will be applied for all days, otherwise each segment will be applied only to its local_date
day_segments = pd.read_csv(day_segments_file)
if(is_valid_frequency_segments(day_segments)):
day_segments = parse_frequency_segments(day_segments)
elif(is_valid_interval_segments(day_segments)):
day_segments = parse_interval_segments(day_segments)
elif(is_valid_event_segments(day_segments)):
day_segments = parse_event_segments(day_segments)
else:
raise ValueError("{} does not have a format compatible with frequency, interval or event day segments. Please refer to [LINK]".format(day_segments_file))
return day_segments
day_segments = parse_day_segments(snakemake.input[0])
2020-07-23 18:00:51 +02:00
day_segments.to_csv(snakemake.output["segments_file"], index=False)