29 lines
847 B
Plaintext
29 lines
847 B
Plaintext
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configfile: "config.yaml"
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include: "rules/preprocessing.snakefile"
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rule all:
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input:
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expand("data/raw/{pid}/{sensor}.csv", pid=config["PIDS"], sensor=config["SENSORS"])
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# --- Packrat Rules --- #
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## Taken from https://github.com/lachlandeer/snakemake-econ-r
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## packrat_install: installs packrat onto machine
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rule packrat_install:
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shell:
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"R -e 'install.packages(\"packrat\", repos=\"http://cran.us.r-project.org\")'"
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## packrat_install: initialize a packrat environment for this project
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rule packrat_init:
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shell:
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"R -e 'packrat::init()'"
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## packrat_snap : Look for new R packages in files & archives them
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rule packrat_snap:
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shell:
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"R -e 'packrat::snapshot()'"
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## packrat_restore: Installs archived packages onto a new machine
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rule packrat_restore:
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shell:
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"R -e 'packrat::restore()'"
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